RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W FLO1P32768 1537 aa11.07□□□□□ -0.64
SMM1YNR015W BCH2P36122 765 aa11.06□□□□□ -0.64
SMM1YNR015W PNT1P38969 423 aa11.06□□□□□ -0.64
SMM1YNR015W PCL8Q08966 492 aa11.06□□□□□ -0.64
SMM1YNR015W CSR2Q12734 1121 aa11.06□□□□□ -0.64
SMM1YNR015W GSC2P40989 1895 aa11.06□□□□□ -0.64
SMM1YNR015W LAM4P38800 1345 aa11.06□□□□□ -0.64
SMM1YNR015W VAS1P07806 1104 aaKnown RBP11.05□□□□□ -0.64
SMM1YNR015W OPI1P21957 404 aa11.05□□□□□ -0.64
SMM1YNR015W RAD53P22216 821 aa11.05□□□□□ -0.64
SMM1YNR015W KEL1P38853 1164 aaKnown RBP11.05□□□□□ -0.64
SMM1YNR015W RIM20Q12033 661 aa11.05□□□□□ -0.64
SMM1YNR015W TAH18Q12181 623 aa11.05□□□□□ -0.64
SMM1YNR015W ADP1P25371 1049 aa11.04□□□□□ -0.64
SMM1YNR015W STM1P39015 273 aaKnown RBP11.04□□□□□ -0.64
SMM1YNR015W GAL2P13181 574 aa11.03□□□□□ -0.64
SMM1YNR015W PPM2Q08282 695 aa11.03□□□□□ -0.64
SMM1YNR015W KEL3Q08979 651 aaPredicted RBP11.03□□□□□ -0.64
SMM1YNR015W PMA1P05030 918 aaKnown RBP11.02□□□□□ -0.65
SMM1YNR015W COQ1P18900 473 aa11.02□□□□□ -0.65
SMM1YNR015W AAP1P37898 856 aaKnown RBP11.02□□□□□ -0.65
SMM1YNR015W ENP2P48234 707 aaKnown RBP11.02□□□□□ -0.65
SMM1YNR015W RRT6P53117 311 aaPredicted RBP11.02□□□□□ -0.65
SMM1YNR015W YBL028CP38202 106 aa11.01□□□□□ -0.65
SMM1YNR015W RRD1P40454 393 aaKnown RBP11.01□□□□□ -0.65
SMM1YNR015W MSH4P40965 878 aaPredicted RBP11.01□□□□□ -0.65
SMM1YNR015W YPL260WQ08977 551 aa11.01□□□□□ -0.65
SMM1YNR015W KIN1P13185 1064 aa11□□□□□ -0.65
SMM1YNR015W MET1P36150 593 aa11□□□□□ -0.65
SMM1YNR015W BRN1P38170 754 aa11□□□□□ -0.65
SMM1YNR015W ETP1P38748 585 aaKnown RBP11□□□□□ -0.65
SMM1YNR015W FPR4Q06205 392 aaPredicted RBP11□□□□□ -0.65
SMM1YNR015W PCS60P38137 543 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
SMM1YNR015W TPS3P38426 1054 aaKnown RBP10.99□□□□□ -0.65
SMM1YNR015W RTS1P38903 757 aa10.99□□□□□ -0.65
SMM1YNR015W GCR2Q01722 534 aa10.99□□□□□ -0.65
SMM1YNR015W CHO2P05374 869 aaKnown RBP10.98□□□□□ -0.65
SMM1YNR015W HVG1P0CE11 249 aa10.98□□□□□ -0.65
SMM1YNR015W PFK2P16862 959 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
SMM1YNR015W SLN1P39928 1220 aaPredicted RBP10.98□□□□□ -0.65
SMM1YNR015W SCY1P53009 804 aa10.98□□□□□ -0.65
SMM1YNR015W YDL124WQ07551 312 aaKnown RBP10.98□□□□□ -0.65
SMM1YNR015W TUB2P02557 457 aaKnown RBP10.97□□□□□ -0.65
SMM1YNR015W YHL050CP38721 697 aa10.97□□□□□ -0.65
SMM1YNR015W PRE8P23639 250 aa10.96□□□□□ -0.65
SMM1YNR015W BSD2P38356 321 aa10.96□□□□□ -0.65
SMM1YNR015W HXT17P53631 564 aa10.96□□□□□ -0.65
SMM1YNR015W RRP8P38961 392 aaKnown RBP10.95□□□□□ -0.66
SMM1YNR015W RPS15Q01855 142 aaKnown RBP10.95□□□□□ -0.66
SMM1YNR015W MRD1Q06106 887 aaKnown RBP10.95□□□□□ -0.66
SMM1YNR015W SSF2Q12153 453 aaPredicted RBP10.95□□□□□ -0.66
SMM1YNR015W GIN4Q12263 1142 aa10.95□□□□□ -0.66
SMM1YNR015W RAD61Q99359 647 aa10.95□□□□□ -0.66
SMM1YNR015W DLD1P32891 587 aa10.94□□□□□ -0.66
SMM1YNR015W HXT13P39924 564 aa10.94□□□□□ -0.66
SMM1YNR015W VID27P40157 782 aa10.94□□□□□ -0.66
SMM1YNR015W SNU71P53207 620 aaKnown RBP10.94□□□□□ -0.66
SMM1YNR015W DUS1P53759 423 aaKnown RBP10.94□□□□□ -0.66
SMM1YNR015W MPH3P0CE00 602 aa10.93□□□□□ -0.66
SMM1YNR015W SRM1P21827 482 aa10.93□□□□□ -0.66
SMM1YNR015W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
SMM1YNR015W CST26P38226 397 aa10.93□□□□□ -0.66
SMM1YNR015W ACA1P39970 489 aa10.93□□□□□ -0.66
SMM1YNR015W PEX29Q03370 554 aa10.93□□□□□ -0.66
SMM1YNR015W SKG3Q06315 1026 aa10.93□□□□□ -0.66
SMM1YNR015W UFD2P54860 961 aa10.92□□□□□ -0.66
SMM1YNR015W SPN1Q06505 410 aaPredicted RBP10.92□□□□□ -0.66
SMM1YNR015W RPC31P17890 251 aa10.91□□□□□ -0.66
SMM1YNR015W MYO3P36006 1272 aa10.91□□□□□ -0.66
SMM1YNR015W CRG1P38892 291 aaRIP-Chip data10.91□□□□□ -0.66not detected
SMM1YNR015W CST9Q06032 482 aa10.91□□□□□ -0.66
SMM1YNR015W RBA50Q04418 439 aa10.9□□□□□ -0.66
SMM1YNR015W LAP2Q10740 671 aa10.9□□□□□ -0.66
SMM1YNR015W TIF6Q12522 245 aaKnown RBP10.9□□□□□ -0.66
SMM1YNR015W TPM1P17536 199 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W CHS3P29465 1165 aa10.89□□□□□ -0.67
SMM1YNR015W ANP1P32629 500 aa10.89□□□□□ -0.67
SMM1YNR015W MOT2P34909 587 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W RER2P35196 286 aa10.89□□□□□ -0.67
SMM1YNR015W OCT1P35999 772 aa10.89□□□□□ -0.67
SMM1YNR015W APE3P37302 537 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W CIC1P38779 376 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W TIF4631P39935 952 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W RSM7P47150 247 aa10.89□□□□□ -0.67
SMM1YNR015W HDA1P53973 706 aa10.89□□□□□ -0.67
SMM1YNR015W PGA3Q12746 312 aaKnown RBP10.89□□□□□ -0.67
SMM1YNR015W KRS1P15180 591 aaKnown RBP10.88□□□□□ -0.67
SMM1YNR015W PRO3P32263 286 aaKnown RBP10.88□□□□□ -0.67
SMM1YNR015W VPS8P39702 1274 aa10.88□□□□□ -0.67
SMM1YNR015W PTK2P47116 818 aaKnown RBP10.88□□□□□ -0.67
SMM1YNR015W ERG12P07277 443 aa10.87□□□□□ -0.67
SMM1YNR015W FBP1P09201 348 aa10.87□□□□□ -0.67
SMM1YNR015W YDJ1P25491 409 aaKnown RBP10.87□□□□□ -0.67
SMM1YNR015W IMP2'P32351 346 aa10.87□□□□□ -0.67
SMM1YNR015W SUB2Q07478 446 aaKnown RBP10.87□□□□□ -0.67
SMM1YNR015W TUS1Q06412 1307 aa10.86□□□□□ -0.67
SMM1YNR015W ACE2P21192 770 aa10.86□□□□□ -0.67
SMM1YNR015W RIT1P23796 513 aa10.86□□□□□ -0.67
SMM1YNR015W PEP3P27801 918 aa10.86□□□□□ -0.67
SMM1YNR015W RSC30P38781 883 aa10.86□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms