RNA–Protein interactions for RNA: YNL037C

IDH1, Transcript of Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, yeast

Gene IDH1, Length 1,083 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IDH1	YNL037C	TPM1	P17536	199 aa	Known RBP	14.02	□□□□□ -0.17
IDH1	YNL037C	MET1	P36150	593 aa		14.02	□□□□□ -0.17
IDH1	YNL037C	AAP1	P37898	856 aa	Known RBP	14.01	□□□□□ -0.17
IDH1	YNL037C	RRP8	P38961	392 aa	Known RBP	14.01	□□□□□ -0.17
IDH1	YNL037C	KEL3	Q08979	651 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH1	YNL037C	TPS3	P38426	1054 aa	Known RBP	14	□□□□□ -0.17
IDH1	YNL037C	RTS1	P38903	757 aa		14	□□□□□ -0.17
IDH1	YNL037C	SNU71	P53207	620 aa	Known RBP	14	□□□□□ -0.17
IDH1	YNL037C	GCR2	Q01722	534 aa		14	□□□□□ -0.17
IDH1	YNL037C	BRN1	P38170	754 aa		13.99	□□□□□ -0.17
IDH1	YNL037C	KEL1	P38853	1164 aa	Known RBP	13.99	□□□□□ -0.17
IDH1	YNL037C	SLN1	P39928	1220 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH1	YNL037C	SSF2	Q12153	453 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH1	YNL037C	MPH3	P0CE00	602 aa		13.98	□□□□□ -0.17
IDH1	YNL037C	BSD2	P38356	321 aa		13.98	□□□□□ -0.17
IDH1	YNL037C	PPM2	Q08282	695 aa		13.98	□□□□□ -0.17
IDH1	YNL037C	KIN1	P13185	1064 aa		13.97	□□□□□ -0.17
IDH1	YNL037C	COQ1	P18900	473 aa		13.97	□□□□□ -0.17
IDH1	YNL037C	YBL028C	P38202	106 aa		13.97	□□□□□ -0.17
IDH1	YNL037C	MRD1	Q06106	887 aa	Known RBP	13.97	□□□□□ -0.17
IDH1	YNL037C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.96	□□□□□ -0.17	not detected
IDH1	YNL037C	ETP1	P38748	585 aa	Known RBP	13.96	□□□□□ -0.17
IDH1	YNL037C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.95	□□□□□ -0.18	RIP-Chip
IDH1	YNL037C	PNT1	P38969	423 aa		13.95	□□□□□ -0.18
IDH1	YNL037C	YDL124W	Q07551	312 aa	Known RBP	13.95	□□□□□ -0.18
IDH1	YNL037C	GIN4	Q12263	1142 aa		13.95	□□□□□ -0.18
IDH1	YNL037C	PRE8	P23639	250 aa		13.94	□□□□□ -0.18
IDH1	YNL037C	CST26	P38226	397 aa		13.94	□□□□□ -0.18
IDH1	YNL037C	RRD1	P40454	393 aa	Known RBP	13.94	□□□□□ -0.18
IDH1	YNL037C	RAD61	Q99359	647 aa		13.94	□□□□□ -0.18
IDH1	YNL037C	HVG1	P0CE11	249 aa		13.93	□□□□□ -0.18
IDH1	YNL037C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.93	□□□□□ -0.18	not detected
IDH1	YNL037C	DLD1	P32891	587 aa		13.93	□□□□□ -0.18
IDH1	YNL037C	UFD2	P54860	961 aa		13.93	□□□□□ -0.18
IDH1	YNL037C	YHL050C	P38721	697 aa		13.92	□□□□□ -0.18
IDH1	YNL037C	TUB2	P02557	457 aa	Known RBP	13.91	□□□□□ -0.18
IDH1	YNL037C	RPC31	P17890	251 aa		13.91	□□□□□ -0.18
IDH1	YNL037C	SRM1	P21827	482 aa		13.91	□□□□□ -0.18
IDH1	YNL037C	CRG1	P38892	291 aa	RIP-Chip data	13.91	□□□□□ -0.18	not detected
IDH1	YNL037C	VID27	P40157	782 aa		13.91	□□□□□ -0.18
IDH1	YNL037C	RPS15	Q01855	142 aa	Known RBP	13.91	□□□□□ -0.18
IDH1	YNL037C	SPN1	Q06505	410 aa	Predicted RBP	13.91	□□□□□ -0.18
IDH1	YNL037C	CST9	Q06032	482 aa		13.9	□□□□□ -0.18
IDH1	YNL037C	CHO2	P05374	869 aa	Known RBP	13.89	□□□□□ -0.19
IDH1	YNL037C	HXT17	P53631	564 aa		13.89	□□□□□ -0.19
IDH1	YNL037C	SKG3	Q06315	1026 aa		13.89	□□□□□ -0.19
IDH1	YNL037C	ISW2	Q08773	1120 aa		13.89	□□□□□ -0.19
IDH1	YNL037C	TOM1	Q03280	3268 aa		13.88	□□□□□ -0.19
IDH1	YNL037C	PES4	P39684	611 aa		13.88	□□□□□ -0.19
IDH1	YNL037C	HXT13	P39924	564 aa		13.88	□□□□□ -0.19
IDH1	YNL037C	ACA1	P39970	489 aa		13.88	□□□□□ -0.19
IDH1	YNL037C	TIF6	Q12522	245 aa	Known RBP	13.88	□□□□□ -0.19
IDH1	YNL037C	MYO3	P36006	1272 aa		13.87	□□□□□ -0.19
IDH1	YNL037C	VPS8	P39702	1274 aa		13.87	□□□□□ -0.19
IDH1	YNL037C	SPO22	P40511	975 aa		13.87	□□□□□ -0.19
IDH1	YNL037C	RBA50	Q04418	439 aa		13.87	□□□□□ -0.19
IDH1	YNL037C	SUB2	Q07478	446 aa	Known RBP	13.87	□□□□□ -0.19
IDH1	YNL037C	OCT1	P35999	772 aa		13.86	□□□□□ -0.19
IDH1	YNL037C	CIC1	P38779	376 aa	Known RBP	13.86	□□□□□ -0.19
IDH1	YNL037C	RSC30	P38781	883 aa		13.86	□□□□□ -0.19
IDH1	YNL037C	LAP2	Q10740	671 aa		13.86	□□□□□ -0.19
IDH1	YNL037C	PEP3	P27801	918 aa		13.85	□□□□□ -0.19
IDH1	YNL037C	ANP1	P32629	500 aa		13.85	□□□□□ -0.19
IDH1	YNL037C	RER2	P35196	286 aa		13.85	□□□□□ -0.19
IDH1	YNL037C	DUS1	P53759	423 aa	Known RBP	13.85	□□□□□ -0.19
IDH1	YNL037C	PEX29	Q03370	554 aa		13.85	□□□□□ -0.19
IDH1	YNL037C	ERG12	P07277	443 aa		13.84	□□□□□ -0.19
IDH1	YNL037C	IMP2'	P32351	346 aa		13.84	□□□□□ -0.19
IDH1	YNL037C	SPT21	P35209	758 aa		13.84	□□□□□ -0.19
IDH1	YNL037C	APE3	P37302	537 aa	Known RBP	13.84	□□□□□ -0.19
IDH1	YNL037C	TIF4631	P39935	952 aa	Known RBP	13.84	□□□□□ -0.19
IDH1	YNL037C	RIT1	P23796	513 aa		13.83	□□□□□ -0.2
IDH1	YNL037C	SIS2	P36024	562 aa		13.83	□□□□□ -0.2
IDH1	YNL037C	LYS14	P40971	790 aa		13.83	□□□□□ -0.2
IDH1	YNL037C	VAB2	P40003	282 aa		13.82	□□□□□ -0.2
IDH1	YNL037C	NET1	P47035	1189 aa		13.82	□□□□□ -0.2
IDH1	YNL037C	SRF1	Q12516	437 aa		13.82	□□□□□ -0.2
IDH1	YNL037C	TUS1	Q06412	1307 aa		13.82	□□□□□ -0.2
IDH1	YNL037C	CHS3	P29465	1165 aa		13.81	□□□□□ -0.2
IDH1	YNL037C	PRO3	P32263	286 aa	Known RBP	13.81	□□□□□ -0.2
IDH1	YNL037C	PRY3	P47033	881 aa		13.81	□□□□□ -0.2
IDH1	YNL037C	ESF1	Q06344	628 aa	Known RBP	13.81	□□□□□ -0.2
IDH1	YNL037C	CLF1	Q12309	687 aa	Predicted RBP	13.81	□□□□□ -0.2
IDH1	YNL037C	MOT2	P34909	587 aa	Known RBP	13.8	□□□□□ -0.2
IDH1	YNL037C	KRI1	P42846	591 aa	Known RBP	13.8	□□□□□ -0.2
IDH1	YNL037C	ALG2	P43636	503 aa		13.8	□□□□□ -0.2
IDH1	YNL037C	JIP4	Q03361	876 aa		13.8	□□□□□ -0.2
IDH1	YNL037C	EST2	Q06163	884 aa		13.8	□□□□□ -0.2
IDH1	YNL037C	PGA3	Q12746	312 aa	Known RBP	13.8	□□□□□ -0.2
IDH1	YNL037C	MAK31	P23059	88 aa		13.79	□□□□□ -0.2
IDH1	YNL037C	PER1	P25625	357 aa		13.79	□□□□□ -0.2
IDH1	YNL037C	AIM9	P40053	627 aa	Known RBP	13.79	□□□□□ -0.2
IDH1	YNL037C	SOL4	P53315	255 aa		13.78	□□□□□ -0.2
IDH1	YNL037C	FOL1	P53848	824 aa		13.78	□□□□□ -0.2
IDH1	YNL037C	RPT6	Q01939	405 aa	Known RBP	13.78	□□□□□ -0.2
IDH1	YNL037C	SPB4	P25808	606 aa	Predicted RBP	13.77	□□□□□ -0.21
IDH1	YNL037C	MCD4	P36051	919 aa		13.77	□□□□□ -0.21
IDH1	YNL037C	SPR3	P41901	512 aa		13.77	□□□□□ -0.21
IDH1	YNL037C	TFC6	Q06339	672 aa		13.77	□□□□□ -0.21
IDH1	YNL037C	FBP1	P09201	348 aa		13.76	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms