RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	TY4B-P	A0A0B7P3V8	1104 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	SUP45	P12385	437 aa	Known RBP	3.97	□□□□□ -1.77
PEX1	YKL197C	OPI1	P21957	404 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	YDJ1	P25491	409 aa	Known RBP	3.97	□□□□□ -1.77
PEX1	YKL197C	PPX1	P38698	397 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	APL6	P46682	809 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	RAD17	P48581	401 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	REX2	P54964	269 aa	Known RBP	3.97	□□□□□ -1.77
PEX1	YKL197C	VTC3	Q02725	835 aa		3.97	□□□□□ -1.77
PEX1	YKL197C	SSF2	Q12153	453 aa	Predicted RBP	3.97	□□□□□ -1.77
PEX1	YKL197C	GCD6	P32501	712 aa	Known RBP	3.96	□□□□□ -1.78
PEX1	YKL197C	ESL2	P36168	1195 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	NPR3	P38742	1146 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	SMD2	Q06217	110 aa	Known RBP	3.96	□□□□□ -1.78
PEX1	YKL197C	ALR1	Q08269	859 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	HSP42	Q12329	375 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	CAT8	P39113	1433 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	HAP1	P0CE41	1502 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	TOM20	P35180	183 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	ERP2	P39704	215 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	DSN1	P40568	576 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	HED1	Q03937	162 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	RRB1	Q04225	511 aa	Known RBP	3.96	□□□□□ -1.78
PEX1	YKL197C	CEX1	Q12453	761 aa		3.96	□□□□□ -1.78
PEX1	YKL197C	MAL31	P38156	614 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	MUM2	P38236	366 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	MEP1	P40260	492 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	RRP15	Q06511	250 aa	Predicted RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	DBP10	Q12389	995 aa	Known RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	YEL077C	Q3E7X8	1277 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	CLN1	P20437	546 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	PAT1	P25644	796 aa	Known RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	WHI5	Q12416	295 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	SPT5	P27692	1063 aa	Known RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	ELA1	P53861	379 aa	Predicted RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	YAF9	P53930	226 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	ERP4	Q12450	207 aa		3.95	□□□□□ -1.78
PEX1	YKL197C	NOP58	Q12499	511 aa	Known RBP	3.95	□□□□□ -1.78
PEX1	YKL197C	ARO1	P08566	1588 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	RDS2	P19541	446 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	STE5	P32917	917 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	MRT4	P33201	236 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	VPS27	P40343	622 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	TPM2	P40414	161 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	KXD1	P53158	218 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	PUP2	P32379	260 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	YHR218W	P38899	603 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	ALD4	P46367	519 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	PRP43	P53131	767 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	DNM1	P54861	757 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	MSH6	Q03834	1242 aa		3.94	□□□□□ -1.78
PEX1	YKL197C	UTP4	Q06679	776 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	BMS1	Q08965	1183 aa	Known RBP	3.94	□□□□□ -1.78
PEX1	YKL197C	PEX5	P35056	612 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	CSE4	P36012	229 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	ERV41	Q04651	352 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	GLE1	Q12315	538 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	TY4A-H	Q6Q5P6	413 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	IQG1	Q12280	1495 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	ACP1	P32463	125 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	YMR124W	P39523	943 aa	Known RBP	3.93	□□□□□ -1.78
PEX1	YKL197C	MET10	P39692	1035 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	ATG32	P40458	529 aa		3.93	□□□□□ -1.78
PEX1	YKL197C	NAF1	P53919	492 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	TBF1	Q02457	562 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	TMA64	Q04600	565 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	SGT2	Q12118	346 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	RUD3	Q12234	484 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	UGA3	P26370	528 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	NOC2	P39744	710 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	SMC3	P47037	1230 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	HUL5	P53119	910 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	ARC19	P33204	171 aa	Known RBP	3.92	□□□□□ -1.78
PEX1	YKL197C	GYP7	P48365	746 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	GPI8	P49018	411 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	COG4	Q06096	861 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	FRA1	Q07825	749 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	APC5	Q08683	685 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	YOR389W	Q08912	624 aa		3.92	□□□□□ -1.78
PEX1	YKL197C	BLI1	P35727	113 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	SIT1	P39980	628 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	SPO71	Q03868	1245 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	YVC1	Q12324	675 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	ENO2	P00925	437 aa	Known RBP	3.91	□□□□□ -1.78
PEX1	YKL197C	CDC4	P07834	779 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	MFT1	P33441	392 aa	Known RBP	3.91	□□□□□ -1.78
PEX1	YKL197C	PAF1	P38351	445 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	BEM4	P39011	633 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	BIM1	P40013	344 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	EMW1	P42842	904 aa	Known RBP	3.91	□□□□□ -1.78
PEX1	YKL197C	RIM21	P48565	533 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	MRX10	Q05648	414 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	YOL057W	Q08225	711 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	YOR093C	Q12275	1648 aa		3.91	□□□□□ -1.78
PEX1	YKL197C	RRN6	P32786	894 aa		3.9	□□□□□ -1.78
PEX1	YKL197C	ATG19	P35193	415 aa		3.9	□□□□□ -1.78
PEX1	YKL197C	APC2	Q12440	853 aa		3.9	□□□□□ -1.78
PEX1	YKL197C	DRS2	P39524	1355 aa		3.9	□□□□□ -1.78
PEX1	YKL197C	PET123	P17558	318 aa		3.9	□□□□□ -1.79
PEX1	YKL197C	MAM1	P40065	302 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms