RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C THI5P43534 340 aa5.17□□□□□ -1.58
PAN1YIR006C THI11P47183 340 aa5.17□□□□□ -1.58
PAN1YIR006C HAP5Q02516 242 aa5.17□□□□□ -1.58
PAN1YIR006C HRQ1Q05549 1077 aa5.17□□□□□ -1.58
PAN1YIR006C THI13Q07748 340 aa5.17□□□□□ -1.58
PAN1YIR006C MDM38Q08179 573 aa5.17□□□□□ -1.58
PAN1YIR006C CPA2P03965 1118 aaKnown RBP5.17□□□□□ -1.58
PAN1YIR006C PIF1P07271 859 aa5.17□□□□□ -1.58
PAN1YIR006C JJJ2P46997 583 aa5.17□□□□□ -1.58
PAN1YIR006C RCR1P38212 213 aa5.17□□□□□ -1.58
PAN1YIR006C UFD2P54860 961 aa5.17□□□□□ -1.58
PAN1YIR006C FRK1Q03002 865 aaPredicted RBP5.17□□□□□ -1.58
PAN1YIR006C CSR1Q06705 408 aaKnown RBP5.17□□□□□ -1.58
PAN1YIR006C MRE11P32829 692 aa5.16□□□□□ -1.58
PAN1YIR006C SPT21P35209 758 aa5.16□□□□□ -1.58
PAN1YIR006C RTT107P38850 1070 aa5.16□□□□□ -1.58
PAN1YIR006C BNI5P53890 448 aaKnown RBP5.16□□□□□ -1.58
PAN1YIR006C PDC1P06169 563 aaKnown RBP5.16□□□□□ -1.58
PAN1YIR006C GSY1P23337 708 aa5.16□□□□□ -1.58
PAN1YIR006C ADE17P38009 592 aaKnown RBP5.16□□□□□ -1.58
PAN1YIR006C HOP2P53187 214 aa5.16□□□□□ -1.58
PAN1YIR006C YNL144CP53907 740 aa5.16□□□□□ -1.58
PAN1YIR006C GDE1Q02979 1223 aa5.16□□□□□ -1.58
PAN1YIR006C SLM3Q12093 417 aa5.16□□□□□ -1.58
PAN1YIR006C UBP12P39538 1254 aa5.16□□□□□ -1.58
PAN1YIR006C ATG36P46983 293 aa5.16□□□□□ -1.58
PAN1YIR006C CWC22P53333 577 aaKnown RBP5.16□□□□□ -1.58
PAN1YIR006C PRP3Q03338 469 aaPredicted RBP5.16□□□□□ -1.58
PAN1YIR006C YRF1-4O13559 1382 aa5.16□□□□□ -1.58
PAN1YIR006C SEC65P29478 273 aa5.15□□□□□ -1.58
PAN1YIR006C CCT4P39078 528 aaKnown RBP5.15□□□□□ -1.58
PAN1YIR006C RKM4Q12504 494 aa5.15□□□□□ -1.58
PAN1YIR006C RDS1P25611 832 aa5.15□□□□□ -1.58
PAN1YIR006C SEC20P28791 383 aa5.15□□□□□ -1.58
PAN1YIR006C APL2P36000 726 aaPredicted RBP5.15□□□□□ -1.58
PAN1YIR006C SET1P38827 1080 aaKnown RBP5.15□□□□□ -1.58
PAN1YIR006C IES2P40154 320 aa5.15□□□□□ -1.58
PAN1YIR006C VPS75P53853 264 aa5.15□□□□□ -1.58
PAN1YIR006C ATG23Q06671 453 aa5.15□□□□□ -1.58
PAN1YIR006C ROM2P51862 1356 aaKnown RBP5.15□□□□□ -1.58
PAN1YIR006C GPA1P08539 472 aa5.15□□□□□ -1.59
PAN1YIR006C SPO16P17122 198 aa5.15□□□□□ -1.59
PAN1YIR006C CBF2P32504 956 aa5.15□□□□□ -1.59
PAN1YIR006C YKL091CP33324 310 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C SET2P46995 733 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C CHC1P22137 1653 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C RRP14P36080 434 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C VPS41P38959 992 aa5.15□□□□□ -1.59
PAN1YIR006C PRP43P53131 767 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C YMR114CQ04471 368 aaKnown RBP5.15□□□□□ -1.59
PAN1YIR006C SPO75Q07798 868 aa5.15□□□□□ -1.59
PAN1YIR006C NKP1Q12493 238 aa5.15□□□□□ -1.59
PAN1YIR006C XRS2P33301 854 aa5.14□□□□□ -1.59
PAN1YIR006C RPN10P38886 268 aaKnown RBP5.14□□□□□ -1.59
PAN1YIR006C SEC9P40357 651 aa5.14□□□□□ -1.59
PAN1YIR006C MSB3P48566 633 aaPredicted RBP5.14□□□□□ -1.59
PAN1YIR006C CPR6P53691 371 aaKnown RBP5.14□□□□□ -1.59
PAN1YIR006C SFB2P53953 876 aa5.14□□□□□ -1.59
PAN1YIR006C VPS9P54787 451 aa5.14□□□□□ -1.59
PAN1YIR006C NTE1Q04958 1679 aa5.14□□□□□ -1.59
PAN1YIR006C CTI6Q08923 506 aa5.14□□□□□ -1.59
PAN1YIR006C RUP1Q12242 671 aa5.14□□□□□ -1.59
PAN1YIR006C YAP5P40574 245 aa5.14□□□□□ -1.59
PAN1YIR006C VPS38Q05919 439 aa5.14□□□□□ -1.59
PAN1YIR006C SPN1Q06505 410 aaPredicted RBP5.14□□□□□ -1.59
PAN1YIR006C RTP1Q12751 981 aa5.14□□□□□ -1.59
PAN1YIR006C TOA1P32773 286 aa5.14□□□□□ -1.59
PAN1YIR006C YNL193WP53870 558 aa5.14□□□□□ -1.59
PAN1YIR006C TIP41Q12199 356 aa5.14□□□□□ -1.59
PAN1YIR006C ARD1P07347 238 aaPredicted RBP5.13□□□□□ -1.59
PAN1YIR006C RRP1P35178 278 aaPredicted RBP5.13□□□□□ -1.59
PAN1YIR006C MAL31P38156 614 aa5.13□□□□□ -1.59
PAN1YIR006C RPG1P38249 964 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C UBX2Q04228 584 aa5.13□□□□□ -1.59
PAN1YIR006C PUS1Q12211 544 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C ENT1Q12518 454 aa5.13□□□□□ -1.59
PAN1YIR006C MLP1Q02455 1875 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C LPD1P09624 499 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C TRL1P09880 827 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C PGI1P12709 554 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C ATE1P16639 503 aa5.13□□□□□ -1.59
PAN1YIR006C GRX1P25373 110 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C HOS4P40480 1083 aa5.13□□□□□ -1.59
PAN1YIR006C PDR11P40550 1411 aa5.13□□□□□ -1.59
PAN1YIR006C SSK22P25390 1331 aaPredicted RBP5.13□□□□□ -1.59
PAN1YIR006C COS5P47187 383 aa5.13□□□□□ -1.59
PAN1YIR006C LSB1P53281 241 aa5.13□□□□□ -1.59
PAN1YIR006C YPL260WQ08977 551 aa5.13□□□□□ -1.59
PAN1YIR006C SPT2P06843 333 aaPredicted RBP5.13□□□□□ -1.59
PAN1YIR006C CDC60P26637 1090 aaKnown RBP5.13□□□□□ -1.59
PAN1YIR006C DNF3Q12674 1656 aa5.12□□□□□ -1.59
PAN1YIR006C HIS4P00815 799 aaKnown RBP5.12□□□□□ -1.59
PAN1YIR006C OSM1P21375 501 aaKnown RBP5.12□□□□□ -1.59
PAN1YIR006C RPC53P25441 422 aa5.12□□□□□ -1.59
PAN1YIR006C SPC72P39723 622 aa5.12□□□□□ -1.59
PAN1YIR006C VPS72Q03388 795 aa5.12□□□□□ -1.59
PAN1YIR006C YDR341CQ05506 607 aaKnown RBP5.12□□□□□ -1.59
PAN1YIR006C AFT2Q08957 416 aa5.12□□□□□ -1.59
PAN1YIR006C ADE6P38972 1358 aaKnown RBP5.12□□□□□ -1.59
PAN1YIR006C CDC48P25694 835 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms