RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C NPL4P33755 580 aa13.61□□□□□ -0.23
SCC4YER147C NOC2P39744 710 aaKnown RBP13.61□□□□□ -0.23
SCC4YER147C RPN11P43588 306 aaKnown RBP13.61□□□□□ -0.23
SCC4YER147C IOC3P43596 787 aa13.61□□□□□ -0.23
SCC4YER147C WAR1Q03631 944 aa13.61□□□□□ -0.23
SCC4YER147C HXK1P04806 485 aaKnown RBP13.6□□□□□ -0.23
SCC4YER147C RGP1P16664 663 aa13.6□□□□□ -0.23
SCC4YER147C COQ1P18900 473 aa13.6□□□□□ -0.23
SCC4YER147C HCA4P20448 770 aaKnown RBP13.6□□□□□ -0.23
SCC4YER147C RRP8P38961 392 aaKnown RBP13.6□□□□□ -0.23
SCC4YER147C NUG1P40010 520 aaKnown RBP13.6□□□□□ -0.23
SCC4YER147C MGM1P32266 881 aa13.59□□□□□ -0.23
SCC4YER147C GRX7P38068 203 aa13.59□□□□□ -0.23
SCC4YER147C RPN10P38886 268 aaKnown RBP13.59□□□□□ -0.23
SCC4YER147C MCM4P30665 933 aaKnown RBP13.59□□□□□ -0.23
SCC4YER147C AKR1P39010 764 aa13.59□□□□□ -0.23
SCC4YER147C TFC8Q12308 588 aa13.59□□□□□ -0.23
SCC4YER147C FAS2P19097 1887 aaKnown RBP13.59□□□□□ -0.23
SCC4YER147C GEF1P37020 779 aa13.58□□□□□ -0.24
SCC4YER147C YIR042CP40586 236 aa13.58□□□□□ -0.24
SCC4YER147C INM2Q05533 292 aa13.58□□□□□ -0.24
SCC4YER147C FAR11P53917 953 aa13.57□□□□□ -0.24
SCC4YER147C DPH6Q12429 685 aa13.57□□□□□ -0.24
SCC4YER147C CYB2P00175 591 aa13.57□□□□□ -0.24
SCC4YER147C TCD1P38756 429 aa13.57□□□□□ -0.24
SCC4YER147C DCS2Q12123 353 aa13.57□□□□□ -0.24
SCC4YER147C BMH2P34730 273 aaKnown RBP13.56□□□□□ -0.24
SCC4YER147C CEP3P40969 608 aa13.56□□□□□ -0.24
SCC4YER147C CTH1P47976 325 aa13.56□□□□□ -0.24
SCC4YER147C SFI1Q12369 946 aa13.56□□□□□ -0.24
SCC4YER147C CHO2P05374 869 aaKnown RBP13.55□□□□□ -0.24
SCC4YER147C RPL22AP05749 121 aaKnown RBP13.55□□□□□ -0.24
SCC4YER147C SWI4P25302 1093 aaKnown RBP13.55□□□□□ -0.24
SCC4YER147C YIL055CP40523 627 aaKnown RBP13.55□□□□□ -0.24
SCC4YER147C UFD2P54860 961 aa13.55□□□□□ -0.24
SCC4YER147C DIB1Q06819 143 aaPredicted RBP13.55□□□□□ -0.24
SCC4YER147C SSA2P10592 639 aaKnown RBP13.55□□□□□ -0.24
SCC4YER147C ICP55P40051 511 aa13.55□□□□□ -0.24
SCC4YER147C CTI6Q08923 506 aa13.55□□□□□ -0.24
SCC4YER147C BUG1Q12191 341 aa13.55□□□□□ -0.24
SCC4YER147C NPR2P39923 615 aa13.54□□□□□ -0.24
SCC4YER147C YFR006WP43590 535 aa13.54□□□□□ -0.24
SCC4YER147C RPS15Q01855 142 aaKnown RBP13.54□□□□□ -0.24
SCC4YER147C JSN1P47135 1091 aaKnown RBP RIP-Chip data13.53□□□□□ -0.24not detected
SCC4YER147C TFC6Q06339 672 aa13.53□□□□□ -0.24
SCC4YER147C CDC6P09119 513 aa13.53□□□□□ -0.24
SCC4YER147C SPC110P32380 944 aa13.53□□□□□ -0.24
SCC4YER147C PSY4P38193 441 aa13.53□□□□□ -0.24
SCC4YER147C SYF1Q04048 859 aaPredicted RBP13.53□□□□□ -0.24
SCC4YER147C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.53□□□□□ -0.24not detected
SCC4YER147C CUE3P53137 624 aaKnown RBP13.52□□□□□ -0.25
SCC4YER147C HDA1P53973 706 aa13.52□□□□□ -0.25
SCC4YER147C GET3Q12154 354 aaKnown RBP13.52□□□□□ -0.25
SCC4YER147C URA1P28272 314 aaPredicted RBP13.51□□□□□ -0.25
SCC4YER147C VPS1P21576 704 aaKnown RBP13.5□□□□□ -0.25
SCC4YER147C BOI1P38041 980 aaKnown RBP13.5□□□□□ -0.25
SCC4YER147C VPS75P53853 264 aa13.5□□□□□ -0.25
SCC4YER147C LTV1P34078 463 aa13.49□□□□□ -0.25
SCC4YER147C PTK2P47116 818 aaKnown RBP13.49□□□□□ -0.25
SCC4YER147C UTP22P53254 1237 aaPredicted RBP13.49□□□□□ -0.25
SCC4YER147C TMA16Q08687 178 aa13.49□□□□□ -0.25
SCC4YER147C ASF1P32447 279 aa13.48□□□□□ -0.25
SCC4YER147C ANP1P32629 500 aa13.48□□□□□ -0.25
SCC4YER147C SPL2P38839 148 aa13.48□□□□□ -0.25
SCC4YER147C CSC1Q06538 782 aa13.48□□□□□ -0.25
SCC4YER147C BDF2Q07442 638 aa13.48□□□□□ -0.25
SCC4YER147C HCR1Q05775 265 aaKnown RBP13.48□□□□□ -0.25
SCC4YER147C CDC15P27636 974 aa13.47□□□□□ -0.25
SCC4YER147C SAC6P32599 642 aaKnown RBP13.47□□□□□ -0.25
SCC4YER147C MAL31P38156 614 aa13.47□□□□□ -0.25
SCC4YER147C OSW7P43611 510 aa13.47□□□□□ -0.25
SCC4YER147C GDE1Q02979 1223 aa13.47□□□□□ -0.25
SCC4YER147C VPS60Q03390 229 aa13.47□□□□□ -0.25
SCC4YER147C YCG1Q06680 1035 aa13.47□□□□□ -0.25
SCC4YER147C MCM3P24279 971 aaKnown RBP13.46□□□□□ -0.25
SCC4YER147C PTK1P36002 662 aaPredicted RBP13.46□□□□□ -0.25
SCC4YER147C MYO3P36006 1272 aa13.46□□□□□ -0.25
SCC4YER147C ADE17P38009 592 aaKnown RBP13.46□□□□□ -0.25
SCC4YER147C RXT2P38255 430 aa13.46□□□□□ -0.25
SCC4YER147C STR2P47164 639 aa13.46□□□□□ -0.25
SCC4YER147C RPT4P53549 437 aaKnown RBP13.46□□□□□ -0.25
SCC4YER147C COG4Q06096 861 aa13.46□□□□□ -0.25
SCC4YER147C MRD1Q06106 887 aaKnown RBP13.46□□□□□ -0.25
SCC4YER147C QCR6P00127 147 aa13.46□□□□□ -0.26
SCC4YER147C BMH1P29311 267 aaKnown RBP13.46□□□□□ -0.26
SCC4YER147C RTS1P38903 757 aa13.46□□□□□ -0.26
SCC4YER147C MSH4P40965 878 aaPredicted RBP13.46□□□□□ -0.26
SCC4YER147C ALD2P47771 506 aa13.46□□□□□ -0.26
SCC4YER147C GFD1Q04839 188 aaKnown RBP13.46□□□□□ -0.26
SCC4YER147C APL4Q12028 832 aa13.46□□□□□ -0.26
SCC4YER147C PET111P08468 800 aa13.45□□□□□ -0.26
SCC4YER147C RPT3P33298 428 aaKnown RBP13.45□□□□□ -0.26
SCC4YER147C IRC4Q03036 179 aa13.45□□□□□ -0.26
SCC4YER147C NBL1Q3E7Y6 73 aa13.45□□□□□ -0.26
SCC4YER147C FIG2P25653 1609 aa13.45□□□□□ -0.26
SCC4YER147C PHO13P19881 312 aa13.44□□□□□ -0.26
SCC4YER147C PCI8P40512 444 aa13.44□□□□□ -0.26
SCC4YER147C AFT2Q08957 416 aa13.44□□□□□ -0.26
SCC4YER147C PDC1P06169 563 aaKnown RBP13.44□□□□□ -0.26
SCC4YER147C MAK31P23059 88 aa13.44□□□□□ -0.26
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms