RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W HST2P53686 357 aa4.67□□□□□ -1.66
TRS85YDR108W ADE12P80210 433 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W RRP9Q06506 573 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W SNQ2P32568 1501 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W GEA2P39993 1459 aaKnown RBP4.67□□□□□ -1.66
TRS85YDR108W RTC1Q08281 1341 aa4.67□□□□□ -1.66
TRS85YDR108W ARD1P07347 238 aaPredicted RBP4.66□□□□□ -1.66
TRS85YDR108W MOD5P07884 428 aa4.66□□□□□ -1.66
TRS85YDR108W SEC20P28791 383 aa4.66□□□□□ -1.66
TRS85YDR108W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
TRS85YDR108W RFC5P38251 354 aa4.66□□□□□ -1.66
TRS85YDR108W INP2Q03824 705 aa4.66□□□□□ -1.66
TRS85YDR108W HED1Q03937 162 aa4.66□□□□□ -1.66
TRS85YDR108W AGE1Q04412 482 aa4.66□□□□□ -1.66
TRS85YDR108W YDR341CQ05506 607 aaKnown RBP4.66□□□□□ -1.66
TRS85YDR108W CIR2Q08822 631 aa4.66□□□□□ -1.66
TRS85YDR108W IQG1Q12280 1495 aa4.66□□□□□ -1.66
TRS85YDR108W ESP1Q03018 1630 aa4.66□□□□□ -1.66
TRS85YDR108W PAT1P25644 796 aaKnown RBP4.66□□□□□ -1.66
TRS85YDR108W ERC1P38767 581 aa4.66□□□□□ -1.66
TRS85YDR108W YJR142WP47173 342 aa4.66□□□□□ -1.66
TRS85YDR108W BTN2P53286 410 aa4.66□□□□□ -1.66
TRS85YDR108W CEF1Q03654 590 aaPredicted RBP4.66□□□□□ -1.66
TRS85YDR108W LCB5Q06147 687 aaKnown RBP4.66□□□□□ -1.66
TRS85YDR108W ATG26Q06321 1198 aa4.66□□□□□ -1.66
TRS85YDR108W SLX4Q12098 748 aa4.66□□□□□ -1.66
TRS85YDR108W CLF1Q12309 687 aaPredicted RBP4.66□□□□□ -1.66
TRS85YDR108W YEL1P34225 687 aa4.65□□□□□ -1.66
TRS85YDR108W HEL1P36113 551 aa4.65□□□□□ -1.66
TRS85YDR108W PET100P38958 111 aa4.65□□□□□ -1.66
TRS85YDR108W MRX12P47084 519 aa4.65□□□□□ -1.66
TRS85YDR108W POL32P47110 350 aa4.65□□□□□ -1.66
TRS85YDR108W TPO2P53283 614 aa4.65□□□□□ -1.66
TRS85YDR108W HST1P53685 503 aa4.65□□□□□ -1.66
TRS85YDR108W SYH1Q02875 849 aaKnown RBP4.65□□□□□ -1.66
TRS85YDR108W YML119WQ03208 357 aa4.65□□□□□ -1.66
TRS85YDR108W KRE28Q04431 385 aa4.65□□□□□ -1.66
TRS85YDR108W CMS1Q07897 291 aaKnown RBP4.65□□□□□ -1.66
TRS85YDR108W MET22P32179 357 aa4.65□□□□□ -1.67
TRS85YDR108W RPC37P36121 282 aa4.65□□□□□ -1.67
TRS85YDR108W NPA3P47122 385 aa4.65□□□□□ -1.67
TRS85YDR108W RTF1P53064 558 aa4.65□□□□□ -1.67
TRS85YDR108W PKH1Q03407 766 aa4.65□□□□□ -1.67
TRS85YDR108W APC11Q12157 165 aa4.65□□□□□ -1.67
TRS85YDR108W MAM3Q12296 706 aa4.65□□□□□ -1.67
TRS85YDR108W SMC6Q12749 1114 aa4.65□□□□□ -1.67
TRS85YDR108W RPO31P04051 1460 aa4.64□□□□□ -1.67
TRS85YDR108W CAT8P39113 1433 aa4.64□□□□□ -1.67
TRS85YDR108W PBS2P08018 668 aa4.64□□□□□ -1.67
TRS85YDR108W CDC48P25694 835 aaKnown RBP4.64□□□□□ -1.67
TRS85YDR108W KAR9P32526 644 aa4.64□□□□□ -1.67
TRS85YDR108W SEC66P33754 206 aa4.64□□□□□ -1.67
TRS85YDR108W RGD1P38339 666 aa4.64□□□□□ -1.67
TRS85YDR108W SHC1P39000 512 aa4.64□□□□□ -1.67
TRS85YDR108W SEC27P41811 889 aaKnown RBP4.64□□□□□ -1.67
TRS85YDR108W TAF1P46677 1066 aa4.64□□□□□ -1.67
TRS85YDR108W CTK3P46963 296 aaPredicted RBP4.64□□□□□ -1.67
TRS85YDR108W YDR338CQ05497 695 aa4.64□□□□□ -1.67
TRS85YDR108W MET32Q12041 191 aa4.64□□□□□ -1.67
TRS85YDR108W AUS1Q08409 1394 aa4.64□□□□□ -1.67
TRS85YDR108W PDR18P53756 1333 aa4.64□□□□□ -1.67
TRS85YDR108W CDC60P26637 1090 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W TPD3P31383 635 aa4.63□□□□□ -1.67
TRS85YDR108W DID4P36108 232 aa4.63□□□□□ -1.67
TRS85YDR108W HGH1P48362 394 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W CWH41P53008 833 aa4.63□□□□□ -1.67
TRS85YDR108W YNL247WP53852 767 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W HIR3P47171 1648 aa4.63□□□□□ -1.67
TRS85YDR108W SES1P07284 462 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W FAR1P21268 830 aa4.63□□□□□ -1.67
TRS85YDR108W PAM1P37304 830 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W YIR042CP40586 236 aa4.63□□□□□ -1.67
TRS85YDR108W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
TRS85YDR108W TUB4P53378 473 aa4.63□□□□□ -1.67
TRS85YDR108W DSL1P53847 754 aa4.63□□□□□ -1.67
TRS85YDR108W SSL2Q00578 843 aa4.63□□□□□ -1.67
TRS85YDR108W PUF6Q04373 656 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W YLR257WQ06146 321 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W TSR1Q07381 788 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W SUB2Q07478 446 aaKnown RBP4.63□□□□□ -1.67
TRS85YDR108W TY4A-HQ6Q5P6 413 aa4.63□□□□□ -1.67
TRS85YDR108W BRR1Q99177 341 aaPredicted RBP4.63□□□□□ -1.67
TRS85YDR108W VPS15P22219 1454 aa4.62□□□□□ -1.67
TRS85YDR108W SWC3P31376 625 aa4.62□□□□□ -1.67
TRS85YDR108W ASF1P32447 279 aa4.62□□□□□ -1.67
TRS85YDR108W PTH2P34222 208 aa4.62□□□□□ -1.67
TRS85YDR108W KDX1P36005 433 aa4.62□□□□□ -1.67
TRS85YDR108W YLF2P38746 405 aa4.62□□□□□ -1.67
TRS85YDR108W ALD4P46367 519 aaKnown RBP4.62□□□□□ -1.67
TRS85YDR108W ASI1P54074 624 aa4.62□□□□□ -1.67
TRS85YDR108W RSA3Q05942 220 aaKnown RBP4.62□□□□□ -1.67
TRS85YDR108W RIX7Q07844 837 aaKnown RBP4.62□□□□□ -1.67
TRS85YDR108W NOC3Q07896 663 aaPredicted RBP4.62□□□□□ -1.67
TRS85YDR108W CHS5Q12114 671 aaKnown RBP4.62□□□□□ -1.67
TRS85YDR108W APC2Q12440 853 aa4.62□□□□□ -1.67
TRS85YDR108W PDR15Q04182 1529 aaKnown RBP4.62□□□□□ -1.67
TRS85YDR108W GDB1Q06625 1536 aa4.62□□□□□ -1.67
TRS85YDR108W DNF1P32660 1571 aa4.62□□□□□ -1.67
TRS85YDR108W UBP1P25037 809 aa4.61□□□□□ -1.67
TRS85YDR108W RME1P32338 300 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms