RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN2	YDL204W	SSA2	P10592	639 aa	Known RBP	11.48	□□□□□ -0.57
RTN2	YDL204W	RER2	P35196	286 aa		11.48	□□□□□ -0.57
RTN2	YDL204W	UFD2	P54860	961 aa		11.48	□□□□□ -0.57
RTN2	YDL204W	CTR9	P89105	1077 aa		11.48	□□□□□ -0.57
RTN2	YDL204W	SAS4	Q04003	481 aa		11.48	□□□□□ -0.57
RTN2	YDL204W	RIX7	Q07844	837 aa	Known RBP	11.48	□□□□□ -0.57
RTN2	YDL204W	TRS33	Q99394	268 aa		11.48	□□□□□ -0.57
RTN2	YDL204W	GRX7	P38068	203 aa		11.47	□□□□□ -0.57
RTN2	YDL204W	RPN1	P38764	993 aa	Known RBP	11.47	□□□□□ -0.57
RTN2	YDL204W	LYS4	P49367	693 aa	Predicted RBP	11.47	□□□□□ -0.57
RTN2	YDL204W	PPM2	Q08282	695 aa		11.47	□□□□□ -0.57
RTN2	YDL204W	HSP82	P02829	709 aa	Known RBP	11.46	□□□□□ -0.57
RTN2	YDL204W	BOI1	P38041	980 aa	Known RBP	11.46	□□□□□ -0.57
RTN2	YDL204W	AAD16	Q02895	342 aa		11.46	□□□□□ -0.57
RTN2	YDL204W	SES1	P07284	462 aa	Known RBP	11.45	□□□□□ -0.58
RTN2	YDL204W	ATE1	P16639	503 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	COQ1	P18900	473 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	HCA4	P20448	770 aa	Known RBP	11.45	□□□□□ -0.58
RTN2	YDL204W	FRD1	P32614	470 aa	Known RBP	11.45	□□□□□ -0.58
RTN2	YDL204W	YKT6	P36015	200 aa	Known RBP	11.45	□□□□□ -0.58
RTN2	YDL204W	RRM3	P38766	723 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	YER130C	P39959	443 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	RPT4	P53549	437 aa	Known RBP	11.45	□□□□□ -0.58
RTN2	YDL204W	FAR11	P53917	953 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	UBX2	Q04228	584 aa		11.45	□□□□□ -0.58
RTN2	YDL204W	CBP3	P21560	335 aa		11.44	□□□□□ -0.58
RTN2	YDL204W	RFT1	P38206	574 aa	Predicted RBP	11.44	□□□□□ -0.58
RTN2	YDL204W	YPT11	P48559	417 aa		11.44	□□□□□ -0.58
RTN2	YDL204W	MRD1	Q06106	887 aa	Known RBP	11.44	□□□□□ -0.58
RTN2	YDL204W	ISW2	Q08773	1120 aa		11.44	□□□□□ -0.58
RTN2	YDL204W	PSF3	Q12146	194 aa		11.44	□□□□□ -0.58
RTN2	YDL204W	HXK1	P04806	485 aa	Known RBP	11.43	□□□□□ -0.58
RTN2	YDL204W	GPA1	P08539	472 aa		11.43	□□□□□ -0.58
RTN2	YDL204W	RGP1	P16664	663 aa		11.43	□□□□□ -0.58
RTN2	YDL204W	MPE1	P35728	441 aa	Known RBP	11.43	□□□□□ -0.58
RTN2	YDL204W	PTK1	P36002	662 aa	Predicted RBP	11.43	□□□□□ -0.58
RTN2	YDL204W	RPN10	P38886	268 aa	Known RBP	11.43	□□□□□ -0.58
RTN2	YDL204W	ALD2	P47771	506 aa		11.43	□□□□□ -0.58
RTN2	YDL204W	RPS15	Q01855	142 aa	Known RBP	11.43	□□□□□ -0.58
RTN2	YDL204W	IRC4	Q03036	179 aa		11.43	□□□□□ -0.58
RTN2	YDL204W	HKR1	P41809	1802 aa		11.43	□□□□□ -0.58
RTN2	YDL204W	MDL2	P33311	773 aa		11.42	□□□□□ -0.58
RTN2	YDL204W	BMH2	P34730	273 aa	Known RBP	11.42	□□□□□ -0.58
RTN2	YDL204W	TOS1	P38288	455 aa		11.42	□□□□□ -0.58
RTN2	YDL204W	AKR1	P39010	764 aa		11.42	□□□□□ -0.58
RTN2	YDL204W	VMS1	Q04311	632 aa	Known RBP	11.42	□□□□□ -0.58
RTN2	YDL204W	PRI1	P10363	409 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	CYC8	P14922	966 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	GLN1	P32288	370 aa	Known RBP	11.41	□□□□□ -0.58
RTN2	YDL204W	RPT3	P33298	428 aa	Known RBP	11.41	□□□□□ -0.58
RTN2	YDL204W	SPL2	P38839	148 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	YCK3	P39962	524 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	SSL2	Q00578	843 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	TFC6	Q06339	672 aa		11.41	□□□□□ -0.58
RTN2	YDL204W	KRE2	P27809	442 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	ASF1	P32447	279 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	JJJ2	P46997	583 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	CTH1	P47976	325 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	TCB2	P48231	1178 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	PIP2	P52960	996 aa		11.4	□□□□□ -0.58
RTN2	YDL204W	CHO2	P05374	869 aa	Known RBP	11.39	□□□□□ -0.59
RTN2	YDL204W	ANP1	P32629	500 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	PFF1	P38244	976 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	RTS1	P38903	757 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	YFH7	P43591	353 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	ALG2	P43636	503 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	TIM50	Q02776	476 aa		11.39	□□□□□ -0.59
RTN2	YDL204W	SIT4	P20604	311 aa		11.38	□□□□□ -0.59
RTN2	YDL204W	SWI4	P25302	1093 aa	Known RBP	11.38	□□□□□ -0.59
RTN2	YDL204W	MSH4	P40965	878 aa	Predicted RBP	11.38	□□□□□ -0.59
RTN2	YDL204W	GDE1	Q02979	1223 aa		11.38	□□□□□ -0.59
RTN2	YDL204W	RPL22A	P05749	121 aa	Known RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	CAF20	P12962	161 aa	Known RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	LCB1	P25045	558 aa	Known RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	MAL31	P38156	614 aa		11.37	□□□□□ -0.59
RTN2	YDL204W	NOC2	P39744	710 aa	Known RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	TFG2	P41896	400 aa	Predicted RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	STU2	P46675	888 aa		11.37	□□□□□ -0.59
RTN2	YDL204W	GET3	Q12154	354 aa	Known RBP	11.37	□□□□□ -0.59
RTN2	YDL204W	NBL1	Q3E7Y6	73 aa		11.37	□□□□□ -0.59
RTN2	YDL204W	GSY2	P27472	705 aa		11.36	□□□□□ -0.59
RTN2	YDL204W	MFT1	P33441	392 aa	Known RBP	11.36	□□□□□ -0.59
RTN2	YDL204W	YPL260W	Q08977	551 aa		11.36	□□□□□ -0.59
RTN2	YDL204W	FLO1	P32768	1537 aa		11.35	□□□□□ -0.59
RTN2	YDL204W	MYO3	P36006	1272 aa		11.35	□□□□□ -0.59
RTN2	YDL204W	GTT3	P39996	337 aa		11.35	□□□□□ -0.59
RTN2	YDL204W	CSC1	Q06538	782 aa		11.35	□□□□□ -0.59
RTN2	YDL204W	DCS2	Q12123	353 aa		11.35	□□□□□ -0.59
RTN2	YDL204W	NOP58	Q12499	511 aa	Known RBP	11.35	□□□□□ -0.59
RTN2	YDL204W	RNR3	P21672	869 aa	Known RBP	11.34	□□□□□ -0.59
RTN2	YDL204W	RIT1	P23796	513 aa		11.34	□□□□□ -0.59
RTN2	YDL204W	SRP40	P32583	406 aa	Predicted RBP	11.34	□□□□□ -0.59
RTN2	YDL204W	RXT2	P38255	430 aa		11.34	□□□□□ -0.59
RTN2	YDL204W	YHL050C	P38721	697 aa		11.34	□□□□□ -0.59
RTN2	YDL204W	FYV10	P40492	516 aa		11.34	□□□□□ -0.59
RTN2	YDL204W	ERO1	Q03103	563 aa		11.34	□□□□□ -0.59
RTN2	YDL204W	MAK31	P23059	88 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	MCM4	P30665	933 aa	Known RBP	11.33	□□□□□ -0.6
RTN2	YDL204W	YBL086C	P38177	466 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	TPM2	P40414	161 aa		11.33	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms