RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GFD2	YCL036W	MSN5	P52918	1224 aa		14	□□□□□ -0.17
GFD2	YCL036W	KRE33	P53914	1056 aa	Known RBP	14	□□□□□ -0.17
GFD2	YCL036W	YLR407W	Q06070	228 aa		14	□□□□□ -0.17
GFD2	YCL036W	APC11	Q12157	165 aa		14	□□□□□ -0.17
GFD2	YCL036W	EPL1	P43572	832 aa		13.99	□□□□□ -0.17
GFD2	YCL036W	RET1	P22276	1149 aa	Known RBP	13.98	□□□□□ -0.17
GFD2	YCL036W	MDL2	P33311	773 aa		13.98	□□□□□ -0.17
GFD2	YCL036W	RSM25	P40496	264 aa		13.98	□□□□□ -0.17
GFD2	YCL036W	BUD6	P41697	788 aa		13.98	□□□□□ -0.17
GFD2	YCL036W	UFD2	P54860	961 aa		13.98	□□□□□ -0.17
GFD2	YCL036W	EST2	Q06163	884 aa		13.98	□□□□□ -0.17
GFD2	YCL036W	FRS2	P15625	503 aa	Known RBP	13.97	□□□□□ -0.17
GFD2	YCL036W	RDS1	P25611	832 aa		13.97	□□□□□ -0.17
GFD2	YCL036W	SIS2	P36024	562 aa		13.97	□□□□□ -0.17
GFD2	YCL036W	JJJ2	P46997	583 aa		13.97	□□□□□ -0.17
GFD2	YCL036W	PSF3	Q12146	194 aa		13.97	□□□□□ -0.17
GFD2	YCL036W	SNF3	P10870	884 aa		13.96	□□□□□ -0.17
GFD2	YCL036W	DID4	P36108	232 aa		13.96	□□□□□ -0.17
GFD2	YCL036W	RKM3	P38222	552 aa		13.96	□□□□□ -0.17
GFD2	YCL036W	RSC1	P53236	928 aa		13.96	□□□□□ -0.17
GFD2	YCL036W	RPS15	Q01855	142 aa	Known RBP	13.96	□□□□□ -0.17
GFD2	YCL036W	ELM1	P32801	640 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	MAL33	P38157	468 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	RFC5	P38251	354 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	UBP10	P53874	792 aa	Predicted RBP	13.95	□□□□□ -0.18
GFD2	YCL036W	HDA1	P53973	706 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	WRS1	Q12109	432 aa	Known RBP	13.95	□□□□□ -0.18
GFD2	YCL036W	YKL222C	P35995	705 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	YHL050C	P38721	697 aa		13.95	□□□□□ -0.18
GFD2	YCL036W	CCT5	P40413	562 aa	Known RBP	13.95	□□□□□ -0.18
GFD2	YCL036W	EAF6	P47128	113 aa		13.94	□□□□□ -0.18
GFD2	YCL036W	YPR148C	Q06523	435 aa		13.94	□□□□□ -0.18
GFD2	YCL036W	GRX6	Q12438	231 aa		13.93	□□□□□ -0.18
GFD2	YCL036W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.93	□□□□□ -0.18	not detected
GFD2	YCL036W	AKR1	P39010	764 aa		13.93	□□□□□ -0.18
GFD2	YCL036W	GSM1	P42950	618 aa		13.93	□□□□□ -0.18
GFD2	YCL036W	PTK2	P47116	818 aa	Known RBP	13.93	□□□□□ -0.18
GFD2	YCL036W	LCD1	Q04377	747 aa		13.93	□□□□□ -0.18
GFD2	YCL036W	TFC6	Q06339	672 aa		13.93	□□□□□ -0.18
GFD2	YCL036W	MPH3	P0CE00	602 aa		13.92	□□□□□ -0.18
GFD2	YCL036W	RTS1	P38903	757 aa		13.92	□□□□□ -0.18
GFD2	YCL036W	PIP2	P52960	996 aa		13.92	□□□□□ -0.18
GFD2	YCL036W	PIL1	P53252	339 aa	Known RBP	13.92	□□□□□ -0.18
GFD2	YCL036W	NSG2	P53898	299 aa		13.92	□□□□□ -0.18
GFD2	YCL036W	MRD1	Q06106	887 aa	Known RBP	13.92	□□□□□ -0.18
GFD2	YCL036W	GAS5	Q08193	484 aa		13.92	□□□□□ -0.18
GFD2	YCL036W	ARG82	P07250	355 aa		13.91	□□□□□ -0.18
GFD2	YCL036W	DIT2	P21595	489 aa		13.9	□□□□□ -0.18
GFD2	YCL036W	ANP1	P32629	500 aa		13.9	□□□□□ -0.18
GFD2	YCL036W	MYO3	P36006	1272 aa		13.9	□□□□□ -0.18
GFD2	YCL036W	KIN4	Q01919	800 aa		13.9	□□□□□ -0.18
GFD2	YCL036W	HCA4	P20448	770 aa	Known RBP	13.9	□□□□□ -0.18
GFD2	YCL036W	GSC2	P40989	1895 aa		13.89	□□□□□ -0.19
GFD2	YCL036W	RPN10	P38886	268 aa	Known RBP	13.89	□□□□□ -0.19
GFD2	YCL036W	PRP42	Q03776	544 aa	Known RBP	13.89	□□□□□ -0.19
GFD2	YCL036W	ISW2	Q08773	1120 aa		13.89	□□□□□ -0.19
GFD2	YCL036W	HSP82	P02829	709 aa	Known RBP	13.88	□□□□□ -0.19
GFD2	YCL036W	APL6	P46682	809 aa		13.88	□□□□□ -0.19
GFD2	YCL036W	DDP1	Q99321	188 aa	Known RBP	13.88	□□□□□ -0.19
GFD2	YCL036W	CTT1	P06115	562 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	CBP3	P21560	335 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	ICL1	P28240	557 aa	Predicted RBP	13.87	□□□□□ -0.19
GFD2	YCL036W	SWI4	P25302	1093 aa	Known RBP	13.87	□□□□□ -0.19
GFD2	YCL036W	NPR3	P38742	1146 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	ETT1	Q08421	412 aa	Known RBP	13.87	□□□□□ -0.19
GFD2	YCL036W	YPL260W	Q08977	551 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	TRS33	Q99394	268 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	FLO11	P08640	1367 aa		13.87	□□□□□ -0.19
GFD2	YCL036W	PGI1	P12709	554 aa	Known RBP	13.86	□□□□□ -0.19
GFD2	YCL036W	VID27	P40157	782 aa		13.86	□□□□□ -0.19
GFD2	YCL036W	CSM2	P40465	213 aa		13.86	□□□□□ -0.19
GFD2	YCL036W	RAD61	Q99359	647 aa		13.86	□□□□□ -0.19
GFD2	YCL036W	RIT1	P23796	513 aa		13.85	□□□□□ -0.19
GFD2	YCL036W	RPS7A	P26786	190 aa	Known RBP	13.85	□□□□□ -0.19
GFD2	YCL036W	PRO3	P32263	286 aa	Known RBP	13.85	□□□□□ -0.19
GFD2	YCL036W	YKU70	P32807	602 aa		13.85	□□□□□ -0.19
GFD2	YCL036W	BMH2	P34730	273 aa	Known RBP	13.85	□□□□□ -0.19
GFD2	YCL036W	TIF4632	P39936	914 aa	Known RBP	13.85	□□□□□ -0.19
GFD2	YCL036W	MSH4	P40965	878 aa	Predicted RBP	13.85	□□□□□ -0.19
GFD2	YCL036W	PUS6	P53294	404 aa		13.85	□□□□□ -0.19
GFD2	YCL036W	YOR111W	Q99210	232 aa		13.84	□□□□□ -0.19
GFD2	YCL036W	MAK31	P23059	88 aa		13.84	□□□□□ -0.19
GFD2	YCL036W	GPA1	P08539	472 aa		13.83	□□□□□ -0.2
GFD2	YCL036W	CDC6	P09119	513 aa		13.83	□□□□□ -0.2
GFD2	YCL036W	SSL2	Q00578	843 aa		13.83	□□□□□ -0.2
GFD2	YCL036W	DPL1	Q05567	589 aa		13.83	□□□□□ -0.2
GFD2	YCL036W	DCS2	Q12123	353 aa		13.83	□□□□□ -0.2
GFD2	YCL036W	YER130C	P39959	443 aa		13.82	□□□□□ -0.2
GFD2	YCL036W	YER156C	P40093	338 aa	Known RBP	13.82	□□□□□ -0.2
GFD2	YCL036W	RRG1	Q12167	365 aa	Predicted RBP	13.82	□□□□□ -0.2
GFD2	YCL036W	VPS1	P21576	704 aa	Known RBP	13.81	□□□□□ -0.2
GFD2	YCL036W	RFT1	P38206	574 aa	Predicted RBP	13.81	□□□□□ -0.2
GFD2	YCL036W	MYO5	Q04439	1219 aa	Known RBP	13.81	□□□□□ -0.2
GFD2	YCL036W	SGD1	Q06132	899 aa		13.81	□□□□□ -0.2
GFD2	YCL036W	MAL31	P38156	614 aa		13.81	□□□□□ -0.2
GFD2	YCL036W	YPT11	P48559	417 aa		13.81	□□□□□ -0.2
GFD2	YCL036W	KEL3	Q08979	651 aa	Predicted RBP	13.81	□□□□□ -0.2
GFD2	YCL036W	RGP1	P16664	663 aa		13.8	□□□□□ -0.2
GFD2	YCL036W	RNR3	P21672	869 aa	Known RBP	13.8	□□□□□ -0.2
GFD2	YCL036W	VMS1	Q04311	632 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms