RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeastyeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD2YCL036W SGS1P35187 1447 aa21.94■■□□□ 1.1
GFD2YCL036W INO80P53115 1489 aa21.56■■□□□ 1.04
GFD2YCL036W TCB3Q03640 1545 aaKnown RBP21.33■■□□□ 1
GFD2YCL036W TY1B-DR4Q07793 1604 aa21.16■□□□□ 0.98
GFD2YCL036W MON2P48563 1636 aaPredicted RBP21.12■□□□□ 0.97
GFD2YCL036W SPA2P23201 1466 aaKnown RBP21■□□□□ 0.95
GFD2YCL036W SSN2P38931 1420 aa20.95■□□□□ 0.94
GFD2YCL036W HSL1P34244 1518 aa20.73■□□□□ 0.91
GFD2YCL036W SWR1Q05471 1514 aa20.68■□□□□ 0.9
GFD2YCL036W SPT6P23615 1451 aaKnown RBP20.63■□□□□ 0.89
GFD2YCL036W HIR3P47171 1648 aa20.34■□□□□ 0.85
GFD2YCL036W DRS1P32892 752 aaKnown RBP20.2■□□□□ 0.82
GFD2YCL036W XRN1P22147 1528 aaKnown RBP20.16■□□□□ 0.82
GFD2YCL036W DNA2P38859 1522 aa20.07■□□□□ 0.8
GFD2YCL036W KOG1P38873 1557 aa19.98■□□□□ 0.79
GFD2YCL036W REV3P14284 1504 aa19.92■□□□□ 0.78
GFD2YCL036W SIN3P22579 1536 aa19.79■□□□□ 0.76
GFD2YCL036W THO2P53552 1597 aaKnown RBP19.75■□□□□ 0.75
GFD2YCL036W SSK2P53599 1579 aa19.68■□□□□ 0.74
GFD2YCL036W BUD4P47136 1447 aa19.61■□□□□ 0.73
GFD2YCL036W TAF2P23255 1407 aa19.59■□□□□ 0.73
GFD2YCL036W ECM5Q03214 1411 aa19.52■□□□□ 0.72
GFD2YCL036W ESP1Q03018 1630 aa19.51■□□□□ 0.71
GFD2YCL036W ATG2P53855 1592 aa19.49■□□□□ 0.71
GFD2YCL036W MYO2P19524 1574 aaKnown RBP19.4■□□□□ 0.7
GFD2YCL036W PEP1P32319 1579 aa19.32■□□□□ 0.68
GFD2YCL036W MDS3P53094 1487 aa19.31■□□□□ 0.68
GFD2YCL036W SKI3P17883 1432 aaKnown RBP19.28■□□□□ 0.68
GFD2YCL036W YPK9Q12697 1472 aa19.17■□□□□ 0.66
GFD2YCL036W POL1P13382 1468 aa19.06■□□□□ 0.64
GFD2YCL036W SCC2Q04002 1493 aa19.03■□□□□ 0.64
GFD2YCL036W STU1P38198 1513 aa18.97■□□□□ 0.63
GFD2YCL036W RPO31P04051 1460 aa18.91■□□□□ 0.62
GFD2YCL036W RKR1Q04781 1562 aa18.9■□□□□ 0.62
GFD2YCL036W UFD4P33202 1483 aa18.85■□□□□ 0.61
GFD2YCL036W CHD1P32657 1468 aa18.83■□□□□ 0.6
GFD2YCL036W TY2B-LR1P0C2J3 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-FP0CX63 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-GR2P0CX64 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-CP25384 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-DR2Q03494 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY1B-DR1Q03855 1755 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-DR3Q07791 1770 aaKnown RBP18.8■□□□□ 0.6
GFD2YCL036W TY2B-OR1Q12113 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-DR1Q12472 1770 aa18.8■□□□□ 0.6
GFD2YCL036W TY2B-OR2Q12501 1770 aa18.8■□□□□ 0.6
GFD2YCL036W YOR1P53049 1477 aa18.79■□□□□ 0.6
GFD2YCL036W YCF1P39109 1515 aaKnown RBP18.78■□□□□ 0.6
GFD2YCL036W BPT1P14772 1559 aa18.78■□□□□ 0.6
GFD2YCL036W MMS22Q06164 1454 aa18.77■□□□□ 0.6
GFD2YCL036W TOP2P06786 1428 aaKnown RBP18.75■□□□□ 0.59
GFD2YCL036W YTA7P40340 1379 aa18.71■□□□□ 0.59
GFD2YCL036W TY1B-DR3Q99231 1755 aa18.69■□□□□ 0.58
GFD2YCL036W SMC4Q12267 1418 aa18.65■□□□□ 0.58
GFD2YCL036W TY2B-BQ12491 1770 aa18.63■□□□□ 0.57
GFD2YCL036W MYO4P32492 1471 aa18.61■□□□□ 0.57
GFD2YCL036W TY1B-BRQ12193 1756 aa18.52■□□□□ 0.56
GFD2YCL036W TY1B-GR3Q12316 1755 aa18.52■□□□□ 0.56
GFD2YCL036W TY1B-ORQ92393 1755 aa18.52■□□□□ 0.56
GFD2YCL036W TY1B-HO13535 1793 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-DR5P0C2I2 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-DR6P0C2I3 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-LR2P0C2I5 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-LR3P0C2I6 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W TY1B-PR1P0C2I9 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W TY1B-PR2P0C2J0 1756 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-PR3P0C2J1 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W TY1B-JR1P47098 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-ML2Q03434 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W TY1B-ER1Q03612 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-ML1Q04711 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W TY1B-GR2Q12269 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-OLQ12273 1755 aa18.5■□□□□ 0.55
GFD2YCL036W TY1B-PLQ12414 1755 aaKnown RBP18.5■□□□□ 0.55
GFD2YCL036W RSE1Q04693 1361 aaKnown RBP18.45■□□□□ 0.54
GFD2YCL036W CDC25P04821 1589 aa18.41■□□□□ 0.54
GFD2YCL036W SAS10Q12136 610 aaPredicted RBP18.39■□□□□ 0.53
GFD2YCL036W SNQ2P32568 1501 aaKnown RBP18.35■□□□□ 0.53
GFD2YCL036W SPP41P38904 1435 aa18.33■□□□□ 0.53
GFD2YCL036W MLP2P40457 1679 aa18.29■□□□□ 0.52
GFD2YCL036W RQC2Q12532 1038 aaKnown RBP18.29■□□□□ 0.52
GFD2YCL036W PAN1P32521 1480 aa18.26■□□□□ 0.51
GFD2YCL036W ESC1Q03661 1658 aaKnown RBP18.23■□□□□ 0.51
GFD2YCL036W STH1P32597 1359 aa18.23■□□□□ 0.51
GFD2YCL036W VTH1P40438 1549 aa18.23■□□□□ 0.51
GFD2YCL036W VTH2P40890 1549 aa18.23■□□□□ 0.51
GFD2YCL036W TY1B-JR2P47100 1755 aaKnown RBP18.19■□□□□ 0.5
GFD2YCL036W TY1B-ER2Q03619 1755 aa18.19■□□□□ 0.5
GFD2YCL036W TY1B-MR1Q04214 1755 aa18.19■□□□□ 0.5
GFD2YCL036W TY1B-MR2Q04670 1755 aaKnown RBP18.19■□□□□ 0.5
GFD2YCL036W TY1B-LR1Q12088 1755 aaKnown RBP18.19■□□□□ 0.5
GFD2YCL036W TY1B-NL1Q12112 1755 aa18.19■□□□□ 0.5
GFD2YCL036W TY1B-GR1Q12141 1755 aa18.19■□□□□ 0.5
GFD2YCL036W TY1B-BLQ12490 1755 aa18.19■□□□□ 0.5
GFD2YCL036W TSC11P40061 1430 aa18.19■□□□□ 0.5
GFD2YCL036W PDR15Q04182 1529 aaKnown RBP18.18■□□□□ 0.5
GFD2YCL036W ULS1Q08562 1619 aa18.17■□□□□ 0.5
GFD2YCL036W RPA190P10964 1664 aaKnown RBP18.12■□□□□ 0.49
GFD2YCL036W DNF1P32660 1571 aa18.11■□□□□ 0.49
GFD2YCL036W MTC1P47018 478 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms