RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W MMR1Q06324 491 aa2.77□□□□□ -1.97
NUP170YBL079W FAA3P39002 694 aa2.76□□□□□ -1.97
NUP170YBL079W YGR125WP53273 1036 aa2.76□□□□□ -1.97
NUP170YBL079W WRS1Q12109 432 aaKnown RBP2.76□□□□□ -1.97
NUP170YBL079W BMS1Q08965 1183 aaKnown RBP2.76□□□□□ -1.97
NUP170YBL079W RGD1P38339 666 aa2.76□□□□□ -1.97
NUP170YBL079W YJL007CP47080 104 aa2.76□□□□□ -1.97
NUP170YBL079W YDR341CQ05506 607 aaKnown RBP2.76□□□□□ -1.97
NUP170YBL079W ASH1P34233 588 aa2.75□□□□□ -1.97
NUP170YBL079W FPR3P38911 411 aaKnown RBP2.75□□□□□ -1.97
NUP170YBL079W RRP8P38961 392 aaKnown RBP2.75□□□□□ -1.97
NUP170YBL079W HMF1P40037 129 aaKnown RBP2.75□□□□□ -1.97
NUP170YBL079W HIM1Q06674 414 aa2.75□□□□□ -1.97
NUP170YBL079W FUB1P25659 250 aa2.75□□□□□ -1.97
NUP170YBL079W MRF1P30775 413 aaPredicted RBP2.75□□□□□ -1.97
NUP170YBL079W LSB1P53281 241 aa2.75□□□□□ -1.97
NUP170YBL079W FAR11P53917 953 aa2.75□□□□□ -1.97
NUP170YBL079W HFI1Q12060 488 aa2.75□□□□□ -1.97
NUP170YBL079W KGD2P19262 463 aaPredicted RBP2.74□□□□□ -1.97
NUP170YBL079W PWP2P25635 923 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W MDR1P53258 950 aa2.74□□□□□ -1.97
NUP170YBL079W MDM20Q12387 796 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W SPB4P25808 606 aaPredicted RBP2.74□□□□□ -1.97
NUP170YBL079W IRE1P32361 1115 aa2.74□□□□□ -1.97
NUP170YBL079W TFA1P36100 482 aa2.74□□□□□ -1.97
NUP170YBL079W BOI1P38041 980 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W ACA1P39970 489 aa2.74□□□□□ -1.97
NUP170YBL079W SSF2Q12153 453 aaPredicted RBP2.74□□□□□ -1.97
NUP170YBL079W MAM3Q12296 706 aa2.74□□□□□ -1.97
NUP170YBL079W TRP5P00931 707 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W SWI6P09959 803 aa2.74□□□□□ -1.97
NUP170YBL079W TIF1P10081 395 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W SRS2P12954 1174 aa2.74□□□□□ -1.97
NUP170YBL079W MGM1P32266 881 aa2.74□□□□□ -1.97
NUP170YBL079W EUG1P32474 517 aa2.74□□□□□ -1.97
NUP170YBL079W NUP133P36161 1157 aa2.74□□□□□ -1.97
NUP170YBL079W VPS27P40343 622 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W ITC1P53125 1264 aa2.74□□□□□ -1.97
NUP170YBL079W MLC1P53141 149 aa2.74□□□□□ -1.97
NUP170YBL079W CNM67P53865 581 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
NUP170YBL079W RAD2P07276 1031 aa2.74□□□□□ -1.97
NUP170YBL079W VMA2P16140 517 aaKnown RBP2.74□□□□□ -1.97
NUP170YBL079W PRD1P25375 712 aa2.74□□□□□ -1.97
NUP170YBL079W YDR306CQ06640 478 aa2.74□□□□□ -1.97
NUP170YBL079W RTP1Q12751 981 aa2.74□□□□□ -1.97
NUP170YBL079W NGR1P32831 672 aaKnown RBP2.73□□□□□ -1.97
NUP170YBL079W SPO74P45819 413 aa2.73□□□□□ -1.97
NUP170YBL079W YPL260WQ08977 551 aa2.73□□□□□ -1.97
NUP170YBL079W LDB19Q12502 818 aa2.73□□□□□ -1.97
NUP170YBL079W SWI1P09547 1314 aa2.73□□□□□ -1.97
NUP170YBL079W RAD53P22216 821 aa2.73□□□□□ -1.97
NUP170YBL079W ADP1P25371 1049 aa2.73□□□□□ -1.97
NUP170YBL079W ASF1P32447 279 aa2.73□□□□□ -1.97
NUP170YBL079W YBL028CP38202 106 aa2.73□□□□□ -1.97
NUP170YBL079W RPT4P53549 437 aaKnown RBP2.73□□□□□ -1.97
NUP170YBL079W ALD6P54115 500 aaKnown RBP2.73□□□□□ -1.97
NUP170YBL079W HEH2Q03281 663 aa2.73□□□□□ -1.97
NUP170YBL079W YOR131CQ12486 218 aa2.73□□□□□ -1.97
NUP170YBL079W MAL31P38156 614 aa2.73□□□□□ -1.97
NUP170YBL079W MDM1Q01846 1127 aa2.73□□□□□ -1.97
NUP170YBL079W GUD1Q07729 489 aa2.73□□□□□ -1.97
NUP170YBL079W COQ4O13525 335 aa2.72□□□□□ -1.97
NUP170YBL079W PRE10P21242 288 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
NUP170YBL079W MCM4P30665 933 aaKnown RBP2.72□□□□□ -1.97
NUP170YBL079W ULP1Q02724 621 aa2.72□□□□□ -1.97
NUP170YBL079W THI3Q07471 609 aa2.72□□□□□ -1.97
NUP170YBL079W RPP2BP02400 110 aaKnown RBP2.72□□□□□ -1.97
NUP170YBL079W BRL1P38770 471 aa2.72□□□□□ -1.97
NUP170YBL079W BUD16P39988 312 aa2.72□□□□□ -1.97
NUP170YBL079W RSM26P47141 266 aa2.72□□□□□ -1.97
NUP170YBL079W LIF1P53150 421 aa2.72□□□□□ -1.97
NUP170YBL079W YNL035CP53962 389 aaKnown RBP2.72□□□□□ -1.97
NUP170YBL079W RAD59Q12223 238 aa2.72□□□□□ -1.97
NUP170YBL079W MDL2P33311 773 aa2.72□□□□□ -1.97
NUP170YBL079W VPS35P34110 944 aa2.72□□□□□ -1.97
NUP170YBL079W FAA4P47912 694 aaKnown RBP2.72□□□□□ -1.97
NUP170YBL079W PHR1P05066 565 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
NUP170YBL079W KIN1P13185 1064 aa2.72□□□□□ -1.97
NUP170YBL079W DLD1P32891 587 aa2.72□□□□□ -1.97
NUP170YBL079W RXT2P38255 430 aa2.72□□□□□ -1.97
NUP170YBL079W VPS45P38932 577 aa2.72□□□□□ -1.97
NUP170YBL079W ISA1Q07821 250 aaPredicted RBP2.72□□□□□ -1.97
NUP170YBL079W YPR204WQ08995 1032 aa2.72□□□□□ -1.97
NUP170YBL079W DYN1P36022 4092 aa2.72□□□□□ -1.97
NUP170YBL079W SES1P07284 462 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W ARG8P18544 423 aa2.71□□□□□ -1.98
NUP170YBL079W KSP1P38691 1029 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W VPS29P38759 282 aa2.71□□□□□ -1.98
NUP170YBL079W HAL5P38970 855 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W LSB6P42951 607 aa2.71□□□□□ -1.98
NUP170YBL079W YJL171CP46992 396 aa2.71□□□□□ -1.98
NUP170YBL079W FLO1P32768 1537 aa2.71□□□□□ -1.98
NUP170YBL079W RME1P32338 300 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W RTS1P38903 757 aa2.71□□□□□ -1.98
NUP170YBL079W JJJ3P47138 172 aa2.71□□□□□ -1.98
NUP170YBL079W ART5P53244 586 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W GYP5Q12344 894 aa2.71□□□□□ -1.98
NUP170YBL079W MSD1P15179 658 aaKnown RBP2.71□□□□□ -1.98
NUP170YBL079W GRS1P38088 690 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms