RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C AIM9P40053 627 aaKnown RBP15.7■□□□□ 0.1
SSA1YAL005C SKI2P35207 1287 aaKnown RBP RIP-Chip data15.69■□□□□ 0.1not detected
SSA1YAL005C RRP8P38961 392 aaKnown RBP15.69■□□□□ 0.1
SSA1YAL005C SLN1P39928 1220 aaPredicted RBP15.69■□□□□ 0.1
SSA1YAL005C SSF2Q12153 453 aaPredicted RBP15.69■□□□□ 0.1
SSA1YAL005C CBP1P07252 654 aa15.68■□□□□ 0.1
SSA1YAL005C TPM1P17536 199 aaKnown RBP15.68■□□□□ 0.1
SSA1YAL005C RTS1P38903 757 aa15.68■□□□□ 0.1
SSA1YAL005C YPL260WQ08977 551 aa15.68■□□□□ 0.1
SSA1YAL005C RLF2Q12495 606 aa15.68■□□□□ 0.1
SSA1YAL005C KEL3Q08979 651 aaPredicted RBP15.67■□□□□ 0.1
SSA1YAL005C IMP2'P32351 346 aa15.66■□□□□ 0.1
SSA1YAL005C KRI1P42846 591 aaKnown RBP15.66■□□□□ 0.1
SSA1YAL005C RPS15Q01855 142 aaKnown RBP15.66■□□□□ 0.1
SSA1YAL005C UFD2P54860 961 aa15.66■□□□□ 0.1
SSA1YAL005C MRD1Q06106 887 aaKnown RBP15.65■□□□□ 0.1
SSA1YAL005C SPN1Q06505 410 aaPredicted RBP15.65■□□□□ 0.1
SSA1YAL005C PEP3P27801 918 aa15.64■□□□□ 0.09
SSA1YAL005C CRG1P38892 291 aaRIP-Chip data15.64■□□□□ 0.09not detected
SSA1YAL005C PCL8Q08966 492 aa15.64■□□□□ 0.09
SSA1YAL005C HDA1P53973 706 aa15.64■□□□□ 0.09
SSA1YAL005C ADP1P25371 1049 aa15.63■□□□□ 0.09
SSA1YAL005C RER2P35196 286 aa15.63■□□□□ 0.09
SSA1YAL005C VID27P40157 782 aa15.63■□□□□ 0.09
SSA1YAL005C SPO22P40511 975 aa15.63■□□□□ 0.09
SSA1YAL005C RAD61Q99359 647 aa15.62■□□□□ 0.09
SSA1YAL005C RNR2P09938 399 aaKnown RBP15.62■□□□□ 0.09
SSA1YAL005C KEL1P38853 1164 aaKnown RBP15.62■□□□□ 0.09
SSA1YAL005C SSA4P22202 642 aaKnown RBP15.61■□□□□ 0.09
SSA1YAL005C NIT1P40447 199 aa15.61■□□□□ 0.09
SSA1YAL005C PTK2P47116 818 aaKnown RBP15.61■□□□□ 0.09
SSA1YAL005C RAD53P22216 821 aa15.6■□□□□ 0.09
SSA1YAL005C MYO3P36006 1272 aa15.6■□□□□ 0.09
SSA1YAL005C OPY1P38271 328 aa15.6■□□□□ 0.09
SSA1YAL005C VID28P40547 921 aa15.6■□□□□ 0.09
SSA1YAL005C MSH4P40965 878 aaPredicted RBP15.6■□□□□ 0.09
SSA1YAL005C AAD16Q02895 342 aa15.6■□□□□ 0.09
SSA1YAL005C ESF1Q06344 628 aaKnown RBP15.6■□□□□ 0.09
SSA1YAL005C PMA1P05030 918 aaKnown RBP15.6■□□□□ 0.09
SSA1YAL005C CAB3P36076 571 aa15.6■□□□□ 0.09
SSA1YAL005C VHR2P40041 505 aa15.6■□□□□ 0.09
SSA1YAL005C PEA2P40091 420 aa15.6■□□□□ 0.09
SSA1YAL005C PEX21P50091 288 aa15.6■□□□□ 0.09
SSA1YAL005C PRO3P32263 286 aaKnown RBP15.59■□□□□ 0.09
SSA1YAL005C ANP1P32629 500 aa15.59■□□□□ 0.09
SSA1YAL005C YBL028CP38202 106 aa15.59■□□□□ 0.09
SSA1YAL005C ECM23Q02710 187 aa15.58■□□□□ 0.09
SSA1YAL005C PCT1P13259 424 aa15.58■□□□□ 0.08
SSA1YAL005C YDL124WQ07551 312 aaKnown RBP15.58■□□□□ 0.08
SSA1YAL005C KIN1P13185 1064 aa15.57■□□□□ 0.08
SSA1YAL005C PRE8P23639 250 aa15.57■□□□□ 0.08
SSA1YAL005C SRS2P12954 1174 aa15.56■□□□□ 0.08
SSA1YAL005C TSR3Q12094 313 aaKnown RBP15.56■□□□□ 0.08
SSA1YAL005C CSR2Q12734 1121 aa15.56■□□□□ 0.08
SSA1YAL005C RIT1P23796 513 aa15.56■□□□□ 0.08
SSA1YAL005C EST2Q06163 884 aa15.56■□□□□ 0.08
SSA1YAL005C TOM1Q03280 3268 aa15.55■□□□□ 0.08
SSA1YAL005C TUB2P02557 457 aaKnown RBP15.55■□□□□ 0.08
SSA1YAL005C SRM1P21827 482 aa15.55■□□□□ 0.08
SSA1YAL005C FBP26P32604 452 aa15.54■□□□□ 0.08
SSA1YAL005C CWC15Q03772 175 aaKnown RBP15.54■□□□□ 0.08
SSA1YAL005C TFC6Q06339 672 aa15.54■□□□□ 0.08
SSA1YAL005C PNT1P38969 423 aa15.53■□□□□ 0.08
SSA1YAL005C VPS8P39702 1274 aa15.53■□□□□ 0.08
SSA1YAL005C ARP5P53946 755 aa15.53■□□□□ 0.08
SSA1YAL005C MPH3P0CE00 602 aa15.53■□□□□ 0.08
SSA1YAL005C VPS20Q04272 221 aa15.53■□□□□ 0.08
SSA1YAL005C SKG3Q06315 1026 aa15.53■□□□□ 0.08
SSA1YAL005C CHS3P29465 1165 aa15.52■□□□□ 0.07
SSA1YAL005C RPS0BP46654 252 aaKnown RBP15.52■□□□□ 0.07
SSA1YAL005C ACE2P21192 770 aa15.51■□□□□ 0.07
SSA1YAL005C CSM2P40465 213 aa15.51■□□□□ 0.07
SSA1YAL005C YIL089WP40500 205 aa15.51■□□□□ 0.07
SSA1YAL005C NPA3P47122 385 aa15.51■□□□□ 0.07
SSA1YAL005C MAK31P23059 88 aa15.51■□□□□ 0.07
SSA1YAL005C SPT21P35209 758 aa15.51■□□□□ 0.07
SSA1YAL005C CST26P38226 397 aa15.51■□□□□ 0.07
SSA1YAL005C MATALPHA2P0CY08 210 aa15.5■□□□□ 0.07
SSA1YAL005C HMLALPHA2P0CY09 210 aa15.5■□□□□ 0.07
SSA1YAL005C GAL2P13181 574 aa15.5■□□□□ 0.07
SSA1YAL005C TPS3P38426 1054 aaKnown RBP15.5■□□□□ 0.07
SSA1YAL005C PFK2P16862 959 aaKnown RBP RIP-Chip data15.49■□□□□ 0.07not detected
SSA1YAL005C CTF18P49956 741 aa15.49■□□□□ 0.07
SSA1YAL005C SNU71P53207 620 aaKnown RBP15.49■□□□□ 0.07
SSA1YAL005C MYO5Q04439 1219 aaKnown RBP15.49■□□□□ 0.07
SSA1YAL005C LAP2Q10740 671 aa15.49■□□□□ 0.07
SSA1YAL005C YKE2P52553 114 aa15.49■□□□□ 0.07
SSA1YAL005C AVT3P36062 692 aa15.48■□□□□ 0.07
SSA1YAL005C AKR1P39010 764 aa15.48■□□□□ 0.07
SSA1YAL005C EPL1P43572 832 aa15.48■□□□□ 0.07
SSA1YAL005C ENT3P47160 408 aa15.47■□□□□ 0.07
SSA1YAL005C RPT6Q01939 405 aaKnown RBP15.47■□□□□ 0.07
SSA1YAL005C RPL19AP0CX82 189 aaKnown RBP15.46■□□□□ 0.07
SSA1YAL005C RPL19BP0CX83 189 aaPredicted RBP15.46■□□□□ 0.07
SSA1YAL005C YOR111WQ99210 232 aa15.46■□□□□ 0.07
SSA1YAL005C ACA1P39970 489 aa15.45■□□□□ 0.06
SSA1YAL005C YLR407WQ06070 228 aa15.45■□□□□ 0.06
SSA1YAL005C TUS1Q06412 1307 aa15.44■□□□□ 0.06
SSA1YAL005C KRS1P15180 591 aaKnown RBP15.44■□□□□ 0.06
SSA1YAL005C SAM2P19358 384 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms