RNA–Protein interactions for RNA: YLR437C

DIF1, Transcript of Protein that regulates nuclear localization of Rnr2p and Rnr4p, yeast

Gene DIF1, Length 402 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DIF1	YLR437C	MSN5	P52918	1224 aa		11.43	□□□□□ -0.58
DIF1	YLR437C	RPT4	P53549	437 aa	Known RBP	11.43	□□□□□ -0.58
DIF1	YLR437C	TRL1	P09880	827 aa	Known RBP	11.42	□□□□□ -0.58
DIF1	YLR437C	RNR2	P09938	399 aa	Known RBP	11.42	□□□□□ -0.58
DIF1	YLR437C	SIT4	P20604	311 aa		11.42	□□□□□ -0.58
DIF1	YLR437C	GLO3	P38682	493 aa	Known RBP	11.42	□□□□□ -0.58
DIF1	YLR437C	NUG1	P40010	520 aa	Known RBP	11.42	□□□□□ -0.58
DIF1	YLR437C	EAF7	P53911	425 aa	Known RBP	11.42	□□□□□ -0.58
DIF1	YLR437C	KRE2	P27809	442 aa		11.4	□□□□□ -0.58
DIF1	YLR437C	YIR042C	P40586	236 aa		11.4	□□□□□ -0.58
DIF1	YLR437C	ERO1	Q03103	563 aa		11.4	□□□□□ -0.58
DIF1	YLR437C	INM2	Q05533	292 aa		11.4	□□□□□ -0.58
DIF1	YLR437C	IRC4	Q03036	179 aa		11.39	□□□□□ -0.59
DIF1	YLR437C	TPM1	P17536	199 aa	Known RBP	11.38	□□□□□ -0.59
DIF1	YLR437C	OPI1	P21957	404 aa		11.38	□□□□□ -0.59
DIF1	YLR437C	VPS24	P36095	224 aa	Known RBP	11.38	□□□□□ -0.59
DIF1	YLR437C	AIM9	P40053	627 aa	Known RBP	11.38	□□□□□ -0.59
DIF1	YLR437C	DJP1	P40564	432 aa		11.38	□□□□□ -0.59
DIF1	YLR437C	EAF6	P47128	113 aa		11.38	□□□□□ -0.59
DIF1	YLR437C	LAM4	P38800	1345 aa		11.37	□□□□□ -0.59
DIF1	YLR437C	LCB1	P25045	558 aa	Known RBP	11.37	□□□□□ -0.59
DIF1	YLR437C	YKL222C	P35995	705 aa		11.37	□□□□□ -0.59
DIF1	YLR437C	ERT1	P38140	529 aa		11.37	□□□□□ -0.59
DIF1	YLR437C	BBC1	P47068	1157 aa		11.37	□□□□□ -0.59
DIF1	YLR437C	ENP2	P48234	707 aa	Known RBP	11.37	□□□□□ -0.59
DIF1	YLR437C	PGA3	Q12746	312 aa	Known RBP	11.37	□□□□□ -0.59
DIF1	YLR437C	RPT3	P33298	428 aa	Known RBP	11.36	□□□□□ -0.59
DIF1	YLR437C	CIC1	P38779	376 aa	Known RBP	11.36	□□□□□ -0.59
DIF1	YLR437C	PKH3	Q03306	898 aa	Predicted RBP	11.36	□□□□□ -0.59
DIF1	YLR437C	VPS20	Q04272	221 aa		11.36	□□□□□ -0.59
DIF1	YLR437C	LSP1	Q12230	341 aa	Known RBP	11.36	□□□□□ -0.59
DIF1	YLR437C	GRX7	P38068	203 aa		11.35	□□□□□ -0.59
DIF1	YLR437C	NPA3	P47122	385 aa		11.35	□□□□□ -0.59
DIF1	YLR437C	TAH18	Q12181	623 aa		11.35	□□□□□ -0.59
DIF1	YLR437C	RET1	P22276	1149 aa	Known RBP	11.34	□□□□□ -0.59
DIF1	YLR437C	IRC8	P47046	822 aa		11.34	□□□□□ -0.59
DIF1	YLR437C	UBX2	Q04228	584 aa		11.34	□□□□□ -0.59
DIF1	YLR437C	KAR5	Q04746	504 aa		11.34	□□□□□ -0.59
DIF1	YLR437C	PTK1	P36002	662 aa	Predicted RBP	11.33	□□□□□ -0.6
DIF1	YLR437C	SPO22	P40511	975 aa		11.33	□□□□□ -0.6
DIF1	YLR437C	TOS4	Q06266	489 aa		11.33	□□□□□ -0.6
DIF1	YLR437C	CYB2	P00175	591 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	CTT1	P06115	562 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	IMP2'	P32351	346 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	MET1	P36150	593 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	SET4	P42948	560 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	JJJ2	P46997	583 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	TSR3	Q12094	313 aa	Known RBP	11.32	□□□□□ -0.6
DIF1	YLR437C	GRX6	Q12438	231 aa		11.32	□□□□□ -0.6
DIF1	YLR437C	MDL2	P33311	773 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	BOI1	P38041	980 aa	Known RBP	11.31	□□□□□ -0.6
DIF1	YLR437C	VID28	P40547	921 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	GSM1	P42950	618 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	YFH7	P43591	353 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	YGL081W	P53156	320 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	KIN4	Q01919	800 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	ESF1	Q06344	628 aa	Known RBP	11.31	□□□□□ -0.6
DIF1	YLR437C	PPM2	Q08282	695 aa		11.31	□□□□□ -0.6
DIF1	YLR437C	ICL1	P28240	557 aa	Predicted RBP	11.3	□□□□□ -0.6
DIF1	YLR437C	ARP5	P53946	755 aa		11.3	□□□□□ -0.6
DIF1	YLR437C	PSF3	Q12146	194 aa		11.3	□□□□□ -0.6
DIF1	YLR437C	SSF2	Q12153	453 aa	Predicted RBP	11.3	□□□□□ -0.6
DIF1	YLR437C	PEP3	P27801	918 aa		11.29	□□□□□ -0.6
DIF1	YLR437C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.29	□□□□□ -0.6	not detected
DIF1	YLR437C	RRP8	P38961	392 aa	Known RBP	11.29	□□□□□ -0.6
DIF1	YLR437C	YER156C	P40093	338 aa	Known RBP	11.29	□□□□□ -0.6
DIF1	YLR437C	IOC3	P43596	787 aa		11.29	□□□□□ -0.6
DIF1	YLR437C	RPL19A	P0CX82	189 aa	Known RBP	11.28	□□□□□ -0.6
DIF1	YLR437C	RPL19B	P0CX83	189 aa	Predicted RBP	11.28	□□□□□ -0.6
DIF1	YLR437C	BIK1	P11709	440 aa		11.28	□□□□□ -0.6
DIF1	YLR437C	COQ1	P18900	473 aa		11.28	□□□□□ -0.6
DIF1	YLR437C	YKU70	P32807	602 aa		11.28	□□□□□ -0.6
DIF1	YLR437C	NPL4	P33755	580 aa		11.28	□□□□□ -0.6
DIF1	YLR437C	GEF1	P37020	779 aa		11.28	□□□□□ -0.6
DIF1	YLR437C	SNF7	P39929	240 aa	Known RBP	11.28	□□□□□ -0.6
DIF1	YLR437C	WRS1	Q12109	432 aa	Known RBP	11.28	□□□□□ -0.6
DIF1	YLR437C	MSP1	P28737	362 aa		11.27	□□□□□ -0.61
DIF1	YLR437C	TIF4632	P39936	914 aa	Known RBP	11.27	□□□□□ -0.61
DIF1	YLR437C	ENT3	P47160	408 aa		11.27	□□□□□ -0.61
DIF1	YLR437C	CTF18	P49956	741 aa		11.27	□□□□□ -0.61
DIF1	YLR437C	GAS5	Q08193	484 aa		11.27	□□□□□ -0.61
DIF1	YLR437C	ROX1	P25042	368 aa		11.26	□□□□□ -0.61
DIF1	YLR437C	SLN1	P39928	1220 aa	Predicted RBP	11.26	□□□□□ -0.61
DIF1	YLR437C	SPN1	Q06505	410 aa	Predicted RBP	11.26	□□□□□ -0.61
DIF1	YLR437C	FLO1	P32768	1537 aa		11.25	□□□□□ -0.61
DIF1	YLR437C	TOP1	P04786	769 aa		11.25	□□□□□ -0.61
DIF1	YLR437C	CHO2	P05374	869 aa	Known RBP	11.25	□□□□□ -0.61
DIF1	YLR437C	ARG82	P07250	355 aa		11.25	□□□□□ -0.61
DIF1	YLR437C	CRG1	P38892	291 aa	RIP-Chip data	11.25	□□□□□ -0.61	not detected
DIF1	YLR437C	PRP42	Q03776	544 aa	Known RBP	11.25	□□□□□ -0.61
DIF1	YLR437C	HRQ1	Q05549	1077 aa		11.25	□□□□□ -0.61
DIF1	YLR437C	GSC2	P40989	1895 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	SNF3	P10870	884 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	FBP26	P32604	452 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	RER2	P35196	286 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	BDH2	P39713	417 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	YKE2	P52553	114 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	PIP2	P52960	996 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	FAP1	P53971	965 aa		11.24	□□□□□ -0.61
DIF1	YLR437C	UFD2	P54860	961 aa		11.24	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms