RNA–Protein interactions for RNA: YLR437C

DIF1, Transcript of Protein that regulates nuclear localization of Rnr2p and Rnr4p, yeastyeast

Gene DIF1, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DIF1YLR437C SGS1P35187 1447 aa17.68■□□□□ 0.42
DIF1YLR437C INO80P53115 1489 aa17.39■□□□□ 0.37
DIF1YLR437C TCB3Q03640 1545 aaKnown RBP17.27■□□□□ 0.36
DIF1YLR437C MON2P48563 1636 aaPredicted RBP17.23■□□□□ 0.35
DIF1YLR437C TY1B-DR4Q07793 1604 aa17.14■□□□□ 0.33
DIF1YLR437C SWR1Q05471 1514 aa16.82■□□□□ 0.28
DIF1YLR437C SPA2P23201 1466 aaKnown RBP16.8■□□□□ 0.28
DIF1YLR437C SSN2P38931 1420 aa16.79■□□□□ 0.28
DIF1YLR437C HSL1P34244 1518 aa16.75■□□□□ 0.27
DIF1YLR437C SPT6P23615 1451 aaKnown RBP16.7■□□□□ 0.26
DIF1YLR437C HIR3P47171 1648 aa16.45■□□□□ 0.22
DIF1YLR437C DNA2P38859 1522 aa16.4■□□□□ 0.22
DIF1YLR437C KOG1P38873 1557 aa16.33■□□□□ 0.2
DIF1YLR437C XRN1P22147 1528 aaKnown RBP16.29■□□□□ 0.2
DIF1YLR437C DRS1P32892 752 aaKnown RBP16.26■□□□□ 0.19
DIF1YLR437C REV3P14284 1504 aa16.08■□□□□ 0.16
DIF1YLR437C THO2P53552 1597 aaKnown RBP15.96■□□□□ 0.15
DIF1YLR437C SIN3P22579 1536 aa15.94■□□□□ 0.14
DIF1YLR437C BUD4P47136 1447 aa15.91■□□□□ 0.14
DIF1YLR437C ECM5Q03214 1411 aa15.88■□□□□ 0.13
DIF1YLR437C TAF2P23255 1407 aa15.86■□□□□ 0.13
DIF1YLR437C SSK2P53599 1579 aa15.86■□□□□ 0.13
DIF1YLR437C ATG2P53855 1592 aa15.78■□□□□ 0.12
DIF1YLR437C ESP1Q03018 1630 aa15.77■□□□□ 0.12
DIF1YLR437C MDS3P53094 1487 aa15.68■□□□□ 0.1
DIF1YLR437C MYO2P19524 1574 aaKnown RBP15.66■□□□□ 0.1
DIF1YLR437C PEP1P32319 1579 aa15.65■□□□□ 0.1
DIF1YLR437C SKI3P17883 1432 aaKnown RBP15.63■□□□□ 0.09
DIF1YLR437C YPK9Q12697 1472 aa15.46■□□□□ 0.07
DIF1YLR437C SCC2Q04002 1493 aa15.37■□□□□ 0.05
DIF1YLR437C POL1P13382 1468 aa15.32■□□□□ 0.04
DIF1YLR437C STU1P38198 1513 aa15.27■□□□□ 0.03
DIF1YLR437C UFD4P33202 1483 aa15.27■□□□□ 0.03
DIF1YLR437C RKR1Q04781 1562 aa15.26■□□□□ 0.03
DIF1YLR437C RPO31P04051 1460 aa15.26■□□□□ 0.03
DIF1YLR437C BPT1P14772 1559 aa15.22■□□□□ 0.03
DIF1YLR437C RSE1Q04693 1361 aaKnown RBP15.22■□□□□ 0.03
DIF1YLR437C TY2B-LR1P0C2J3 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-FP0CX63 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-GR2P0CX64 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-CP25384 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-DR2Q03494 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY1B-DR1Q03855 1755 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-DR3Q07791 1770 aaKnown RBP15.21■□□□□ 0.03
DIF1YLR437C TY2B-OR1Q12113 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-DR1Q12472 1770 aa15.21■□□□□ 0.03
DIF1YLR437C TY2B-OR2Q12501 1770 aa15.21■□□□□ 0.03
DIF1YLR437C YCF1P39109 1515 aaKnown RBP15.16■□□□□ 0.02
DIF1YLR437C YOR1P53049 1477 aa15.13■□□□□ 0.01
DIF1YLR437C TOP2P06786 1428 aaKnown RBP15.12■□□□□ 0.01
DIF1YLR437C TY1B-DR3Q99231 1755 aa15.11■□□□□ 0.01
DIF1YLR437C TY2B-BQ12491 1770 aa15.06■□□□□ 0
DIF1YLR437C YTA7P40340 1379 aa15.04■□□□□ -0
DIF1YLR437C SMC4Q12267 1418 aa15.02■□□□□ -0
DIF1YLR437C CHD1P32657 1468 aa15.01□□□□□ -0.01
DIF1YLR437C TY1B-BRQ12193 1756 aa15.01□□□□□ -0.01
DIF1YLR437C TY1B-GR3Q12316 1755 aa15.01□□□□□ -0.01
DIF1YLR437C TY1B-ORQ92393 1755 aa15.01□□□□□ -0.01
DIF1YLR437C MMS22Q06164 1454 aa14.99□□□□□ -0.01
DIF1YLR437C TY1B-HO13535 1793 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-DR5P0C2I2 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-DR6P0C2I3 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-LR2P0C2I5 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-LR3P0C2I6 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C TY1B-PR1P0C2I9 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C TY1B-PR2P0C2J0 1756 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-PR3P0C2J1 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C TY1B-JR1P47098 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-ML2Q03434 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C TY1B-ER1Q03612 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-ML1Q04711 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C TY1B-GR2Q12269 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-OLQ12273 1755 aa14.97□□□□□ -0.01
DIF1YLR437C TY1B-PLQ12414 1755 aaKnown RBP14.97□□□□□ -0.01
DIF1YLR437C MYO4P32492 1471 aa14.95□□□□□ -0.02
DIF1YLR437C MTC1P47018 478 aaKnown RBP14.93□□□□□ -0.02
DIF1YLR437C CDC25P04821 1589 aa14.93□□□□□ -0.02
DIF1YLR437C RQC2Q12532 1038 aaKnown RBP14.92□□□□□ -0.02
DIF1YLR437C ESC1Q03661 1658 aaKnown RBP14.85□□□□□ -0.03
DIF1YLR437C SAS10Q12136 610 aaPredicted RBP14.82□□□□□ -0.04
DIF1YLR437C SPP41P38904 1435 aa14.81□□□□□ -0.04
DIF1YLR437C PAN1P32521 1480 aa14.8□□□□□ -0.04
DIF1YLR437C SNQ2P32568 1501 aaKnown RBP14.76□□□□□ -0.05
DIF1YLR437C MLP2P40457 1679 aa14.75□□□□□ -0.05
DIF1YLR437C TY1B-JR2P47100 1755 aaKnown RBP14.72□□□□□ -0.05
DIF1YLR437C TY1B-ER2Q03619 1755 aa14.72□□□□□ -0.05
DIF1YLR437C TY1B-MR1Q04214 1755 aa14.72□□□□□ -0.05
DIF1YLR437C TY1B-MR2Q04670 1755 aaKnown RBP14.72□□□□□ -0.05
DIF1YLR437C TY1B-LR1Q12088 1755 aaKnown RBP14.72□□□□□ -0.05
DIF1YLR437C TY1B-NL1Q12112 1755 aa14.72□□□□□ -0.05
DIF1YLR437C TY1B-GR1Q12141 1755 aa14.72□□□□□ -0.05
DIF1YLR437C TY1B-BLQ12490 1755 aa14.72□□□□□ -0.05
DIF1YLR437C VTH1P40438 1549 aa14.71□□□□□ -0.05
DIF1YLR437C VTH2P40890 1549 aa14.71□□□□□ -0.05
DIF1YLR437C RPA190P10964 1664 aaKnown RBP14.71□□□□□ -0.06
DIF1YLR437C DNF1P32660 1571 aa14.68□□□□□ -0.06
DIF1YLR437C TSC11P40061 1430 aa14.68□□□□□ -0.06
DIF1YLR437C STH1P32597 1359 aa14.68□□□□□ -0.06
DIF1YLR437C PDR15Q04182 1529 aaKnown RBP14.62□□□□□ -0.07
DIF1YLR437C TRM732Q03496 1420 aa14.62□□□□□ -0.07
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms