RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Nhsl1Q8CAF4 1587 aa17.83■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Plekhg1F6S200 1446 aa17.83■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Ifit1bl1D3Z6F0 470 aa17.83■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Puf60Q3UEB3 564 aaKnown RBP17.83■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Fan1Q69ZT1 1020 aa17.83■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Bcl2l12Q9D3J3 255 aa17.83■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Rreb1Q3UH06 1700 aaKnown RBP17.83■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Kdm2aP59997 1161 aa17.82■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Usp47Q8BY87 1376 aa17.81■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Wnk3Q80XP9 1757 aa17.81■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Cep152A2AUM9 1736 aaKnown RBP17.81■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Rgl3Q3UYI5 709 aa17.8■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Farp2Q91VS8 1065 aa17.8■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Sipa1l2Q80TE4 1722 aa17.8■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Pik3c2bE9QAN8 1632 aa17.8■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 MypopQ8R4U1 393 aa17.79■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Usp32F8VPZ3 1604 aa17.79■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 NinlQ6ZQ12 1394 aa17.79■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 D430041D05RikF6ZGR6 1678 aa17.78■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Gm20521D3Z5F7 333 aa17.78■□□□□ 0.44
Ccdc28b-202ENSMUST00000106035 Lrrc7Q80TE7 1490 aa17.76■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Cep170bQ80U49 1574 aa17.76■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 GnpatP98192 678 aa17.76■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Os9Q8K2C7 672 aa17.76■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Camta1A2A891 1682 aa17.75■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Cdk5rap2Q8K389 1822 aa17.75■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Abcc10Q8R4P9 1501 aa17.74■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Ggt6Q6PDE7 497 aa17.74■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Tmem2Q5FWI3 1383 aa17.74■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Lrp6O88572 1613 aa17.73■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Ddx17Q501J6 650 aaKnown RBP17.73■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 C5P06684 1680 aa17.73■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Als2Q920R0 1651 aa17.73■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 IqubQ8CDK3 788 aa17.71■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Marf1Q8BJ34 1730 aaKnown RBP17.71■□□□□ 0.43
Ccdc28b-202ENSMUST00000106035 Idi1P58044 227 aa17.7■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Dmrt2Q8BG36 561 aa17.7■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Emilin2Q8K482 1074 aa17.7■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Sirt1Q923E4 737 aa17.7■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Mier1Q5UAK0 511 aa17.69■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Atp2b2Q9R0K7 1198 aa17.69■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 N4bp2F8VQG7 1678 aaKnown RBP17.68■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Grwd1Q810D6 446 aaKnown RBP17.68■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Cpsf1Q9EPU4 1441 aaKnown RBP17.68■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Kif1aP33173 1695 aa17.67■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Eid3Q3V124 375 aa17.67■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Fam135bQ9DAI6 1403 aa17.66■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Atp7bQ64446 1462 aa17.66■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Sipa1l1Q8C0T5 1782 aa17.66■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Arhgef1Q61210 920 aaKnown RBP17.65■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Usp40Q8BWR4 1235 aa17.65■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Polr3aB2RXC6 1390 aa17.65■□□□□ 0.42
Ccdc28b-202ENSMUST00000106035 Atp10bB1AWN4 1474 aa17.64■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Tex14Q7M6U3 1450 aa17.64■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Stag3O70576 1240 aa17.64■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Hspa5P20029 655 aaKnown RBP17.64■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Lrrc59Q922Q8 307 aaKnown RBP17.64■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Cadps2Q8BYR5 1297 aa17.63■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Abca14E9Q8F8 1683 aa17.62■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Zranb1Q7M760 708 aa17.62■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Ap3b2Q9JME5 1082 aa17.61■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Wdr17E9Q271 1322 aa17.61■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Mink1Q9JM52 1308 aa17.61■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Sox12Q04890 314 aa17.6■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Smim5Q8BT42 78 aa17.6■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Stard8Q8K031 1019 aa17.6■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Acin1Q9JIX8 1338 aaKnown RBP17.6■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 RalgapbQ8BQZ4 1484 aa17.59■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Nphp4P59240 1425 aa17.59■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 Gm16486A0A1D5RMD1 1434 aa17.58■□□□□ 0.41
Ccdc28b-202ENSMUST00000106035 InhbeO08717 350 aa17.57■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 Ddx54Q8K4L0 874 aaKnown RBP17.55■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 PtpruB1AUH1 1446 aa17.55■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 Cdk19Q8BWD8 501 aa17.54■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 Gtf2e1Q9D0D5 440 aa17.54■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 NktrP30415 1453 aa17.54■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 NgefQ8CHT1 710 aa17.53■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 Acsbg1Q99PU5 721 aa17.52■□□□□ 0.4
Ccdc28b-202ENSMUST00000106035 Dixdc1Q80Y83 711 aa17.51■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Tnrc6bQ8BKI2 1810 aaKnown RBP17.51■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Nrxn1Q9CS84 1514 aa17.51■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Mon2Q80TL7 1715 aa17.5■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 CenpjQ569L8 1344 aa17.49■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Zmym3Q9JLM4 1370 aa17.49■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Fyb1O35601 819 aa17.48■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Neurod1Q60867 357 aa17.48■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Slc35g1Q8BY79 368 aa17.48■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Rgs17Q9QZB0 210 aa17.48■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Abca15E9PWH4 1668 aa17.48■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Gsto1O09131 240 aa17.47■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 ZgpatQ8VDM1 511 aa17.47■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Srcin1Q9QWI6 1250 aa17.47■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Mug2P28666 1451 aa17.47■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Col22a1E9Q7P1 1613 aa17.47■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Znf316Q6PGE4 1016 aa17.46■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Eno4Q8C042 619 aa17.46■□□□□ 0.39
Ccdc28b-202ENSMUST00000106035 Cdhr2E9Q7P9 1308 aa17.46■□□□□ 0.38
Ccdc28b-202ENSMUST00000106035 Col16a1Q8BLX7 1580 aa17.45■□□□□ 0.38
Ccdc28b-202ENSMUST00000106035 MpndQ3TV65 487 aa17.45■□□□□ 0.38
Ccdc28b-202ENSMUST00000106035 Idi2Q8BFZ6 227 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms