Protein–RNA interactions for Protein: E9Q7P9

Cdhr2, Cadherin-related family member 2, mousemouse

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr2E9Q7P9 Gm25239-201ENSMUST00000174915 86 ntBASIC53.52■■■■■ 6.16
Cdhr2E9Q7P9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC49.79■■■■■ 5.56
Cdhr2E9Q7P9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC48.97■■■■■ 5.43
Cdhr2E9Q7P9 Gm24109-201ENSMUST00000175489 103 ntBASIC46.69■■■■■ 5.06
Cdhr2E9Q7P9 Gm15042-201ENSMUST00000120212 883 ntBASIC46.16■■■■■ 4.98
Cdhr2E9Q7P9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45.24■■■■■ 4.83
Cdhr2E9Q7P9 Gm15045-201ENSMUST00000117359 883 ntBASIC45.08■■■■■ 4.81
Cdhr2E9Q7P9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.08■■■■■ 4.81
Cdhr2E9Q7P9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC44.99■■■■■ 4.79
Cdhr2E9Q7P9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.73
Cdhr2E9Q7P9 Gm23366-201ENSMUST00000175022 89 ntBASIC44.59■■■■■ 4.73
Cdhr2E9Q7P9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC43.75■■■■■ 4.59
Cdhr2E9Q7P9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC43.34■■■■■ 4.53
Cdhr2E9Q7P9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC43.32■■■■■ 4.53
Cdhr2E9Q7P9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
Cdhr2E9Q7P9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Cdhr2E9Q7P9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC43.03■■■■■ 4.48
Cdhr2E9Q7P9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC42.73■■■■■ 4.43
Cdhr2E9Q7P9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC42.64■■■■■ 4.42
Cdhr2E9Q7P9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Cdhr2E9Q7P9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC42.47■■■■■ 4.39
Cdhr2E9Q7P9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC42.46■■■■■ 4.39
Cdhr2E9Q7P9 Gm25238-201ENSMUST00000174914 89 ntBASIC42.46■■■■■ 4.39
Cdhr2E9Q7P9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.17■■■■■ 4.34
Cdhr2E9Q7P9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.79■■■■■ 4.28
Cdhr2E9Q7P9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC41.61■■■■■ 4.25
Cdhr2E9Q7P9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
Cdhr2E9Q7P9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC41.43■■■■■ 4.22
Cdhr2E9Q7P9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Cdhr2E9Q7P9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41.28■■■■■ 4.2
Cdhr2E9Q7P9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.25■■■■■ 4.19
Cdhr2E9Q7P9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.18■■■■■ 4.18
Cdhr2E9Q7P9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.02■■■■■ 4.16
Cdhr2E9Q7P9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC40.98■■■■■ 4.15
Cdhr2E9Q7P9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.96■■■■■ 4.15
Cdhr2E9Q7P9 Gm25262-201ENSMUST00000174934 133 ntBASIC40.93■■■■■ 4.14
Cdhr2E9Q7P9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.92■■■■■ 4.14
Cdhr2E9Q7P9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Cdhr2E9Q7P9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Cdhr2E9Q7P9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.64■■■■■ 4.1
Cdhr2E9Q7P9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC40.53■■■■■ 4.08
Cdhr2E9Q7P9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC40.42■■■■■ 4.06
Cdhr2E9Q7P9 Gm27325-201ENSMUST00000175467 74 ntBASIC40.36■■■■■ 4.05
Cdhr2E9Q7P9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40.26■■■■■ 4.04
Cdhr2E9Q7P9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Cdhr2E9Q7P9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC40.2■■■■■ 4.03
Cdhr2E9Q7P9 Gm26115-201ENSMUST00000175605 87 ntBASIC40.16■■■■■ 4.02
Cdhr2E9Q7P9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40.07■■■■■ 4
Cdhr2E9Q7P9 Rab21-202ENSMUST00000218831 843 ntBASIC40.02■■■■■ 4
Cdhr2E9Q7P9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Cdhr2E9Q7P9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC39.97■■■■□ 3.99
Cdhr2E9Q7P9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
Cdhr2E9Q7P9 Gm8109-201ENSMUST00000194076 746 ntBASIC39.89■■■■□ 3.98
Cdhr2E9Q7P9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
Cdhr2E9Q7P9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Cdhr2E9Q7P9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Cdhr2E9Q7P9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.72■■■■□ 3.95
Cdhr2E9Q7P9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.68■■■■□ 3.94
Cdhr2E9Q7P9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
Cdhr2E9Q7P9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Cdhr2E9Q7P9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.57■■■■□ 3.92
Cdhr2E9Q7P9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC39.53■■■■□ 3.92
Cdhr2E9Q7P9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.48■■■■□ 3.91
Cdhr2E9Q7P9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.32■■■■□ 3.88
Cdhr2E9Q7P9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.27■■■■□ 3.88
Cdhr2E9Q7P9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Cdhr2E9Q7P9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.03■■■■□ 3.84
Cdhr2E9Q7P9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.96■■■■□ 3.83
Cdhr2E9Q7P9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
Cdhr2E9Q7P9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC38.93■■■■□ 3.82
Cdhr2E9Q7P9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.93■■■■□ 3.82
Cdhr2E9Q7P9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Cdhr2E9Q7P9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
Cdhr2E9Q7P9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38.86■■■■□ 3.81
Cdhr2E9Q7P9 Psd-208ENSMUST00000224556 2034 ntBASIC38.83■■■■□ 3.81
Cdhr2E9Q7P9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.82■■■■□ 3.8
Cdhr2E9Q7P9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC38.81■■■■□ 3.8
Cdhr2E9Q7P9 Gm17082-201ENSMUST00000166043 1091 ntBASIC38.77■■■■□ 3.8
Cdhr2E9Q7P9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Cdhr2E9Q7P9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Cdhr2E9Q7P9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.63■■■■□ 3.77
Cdhr2E9Q7P9 Gm24804-201ENSMUST00000174982 85 ntBASIC38.57■■■■□ 3.76
Cdhr2E9Q7P9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.55■■■■□ 3.76
Cdhr2E9Q7P9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.43■■■■□ 3.74
Cdhr2E9Q7P9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.35■■■■□ 3.73
Cdhr2E9Q7P9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.34■■■■□ 3.73
Cdhr2E9Q7P9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Cdhr2E9Q7P9 Gm27322-201ENSMUST00000184007 104 ntBASIC38.28■■■■□ 3.72
Cdhr2E9Q7P9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.27■■■■□ 3.72
Cdhr2E9Q7P9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.27■■■■□ 3.72
Cdhr2E9Q7P9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
Cdhr2E9Q7P9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC38.21■■■■□ 3.71
Cdhr2E9Q7P9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.17■■■■□ 3.7
Cdhr2E9Q7P9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.12■■■■□ 3.69
Cdhr2E9Q7P9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Cdhr2E9Q7P9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC38.07■■■■□ 3.68
Cdhr2E9Q7P9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Cdhr2E9Q7P9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
Cdhr2E9Q7P9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Cdhr2E9Q7P9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms