RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W ARR2Q06597 130 aa1.8□□□□□ -2.12
LSM12YHR121W HEM25Q07534 307 aa1.8□□□□□ -2.12
LSM12YHR121W CSI2Q08054 341 aa1.8□□□□□ -2.12
LSM12YHR121W YPL229WQ99395 206 aa1.8□□□□□ -2.12
LSM12YHR121W ERD2P18414 219 aa1.79□□□□□ -2.12
LSM12YHR121W YAR068WP39564 161 aa1.79□□□□□ -2.12
LSM12YHR121W GAT4P40569 121 aa1.79□□□□□ -2.12
LSM12YHR121W CAT5P41735 233 aa1.79□□□□□ -2.12
LSM12YHR121W YFL051CP43552 160 aa1.79□□□□□ -2.12
LSM12YHR121W RRT8Q08219 342 aa1.79□□□□□ -2.12
LSM12YHR121W UBR1P19812 1950 aa1.79□□□□□ -2.12
LSM12YHR121W FCY2P17064 533 aa1.78□□□□□ -2.12
LSM12YHR121W AUA1P32450 94 aa1.78□□□□□ -2.12
LSM12YHR121W RPF1P38805 295 aaKnown RBP1.78□□□□□ -2.12
LSM12YHR121W BNA6P43619 295 aa1.78□□□□□ -2.12
LSM12YHR121W FMN1Q03778 218 aa1.78□□□□□ -2.12
LSM12YHR121W YLR126CQ12288 251 aa1.78□□□□□ -2.12
LSM12YHR121W SLH1P53327 1967 aaKnown RBP1.78□□□□□ -2.13
LSM12YHR121W RTC4P53850 401 aa1.77□□□□□ -2.13
LSM12YHR121W TIM8P57744 87 aa1.77□□□□□ -2.13
LSM12YHR121W MIX14Q04341 121 aa1.77□□□□□ -2.13
LSM12YHR121W RAF1Q06891 181 aa1.77□□□□□ -2.13
LSM12YHR121W YOR020W-AQ3E824 90 aa1.77□□□□□ -2.13
LSM12YHR121W YHR139C-AO13536 103 aa1.76□□□□□ -2.13
LSM12YHR121W YUH1P35127 236 aa1.76□□□□□ -2.13
LSM12YHR121W YKL075CP36083 450 aa1.76□□□□□ -2.13
LSM12YHR121W ECM33P38248 429 aaKnown RBP1.76□□□□□ -2.13
LSM12YHR121W SVP26P38869 228 aa1.76□□□□□ -2.13
LSM12YHR121W YJR056CP47115 236 aa1.76□□□□□ -2.13
LSM12YHR121W SML1Q04964 104 aa1.76□□□□□ -2.13
LSM12YHR121W RPL2AP0CX45 254 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W RPL2BP0CX46 254 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W PET9P18239 318 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W SEC14P24280 304 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W RPL13BP40212 199 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W SOK1P40317 901 aa1.75□□□□□ -2.13
LSM12YHR121W HAM1P47119 197 aaKnown RBP1.75□□□□□ -2.13
LSM12YHR121W YLR162WQ06235 118 aa1.75□□□□□ -2.13
LSM12YHR121W PAM18Q07914 168 aa1.75□□□□□ -2.13
LSM12YHR121W GTT2Q12390 233 aa1.75□□□□□ -2.13
LSM12YHR121W RPL13AQ12690 199 aaPredicted RBP1.75□□□□□ -2.13
LSM12YHR121W MEI4P29467 408 aa1.74□□□□□ -2.13
LSM12YHR121W PRP18P33411 251 aaPredicted RBP1.74□□□□□ -2.13
LSM12YHR121W YBR063CP38083 404 aa1.74□□□□□ -2.13
LSM12YHR121W ILM1P47155 203 aa1.74□□□□□ -2.13
LSM12YHR121W HOP2P53187 214 aa1.74□□□□□ -2.13
LSM12YHR121W LDB18Q07887 179 aa1.74□□□□□ -2.13
LSM12YHR121W ATG31Q12421 196 aa1.74□□□□□ -2.13
LSM12YHR121W YEL028WP39989 153 aa1.73□□□□□ -2.13
LSM12YHR121W ADO1P47143 340 aaKnown RBP1.73□□□□□ -2.13
LSM12YHR121W ERV29P53337 310 aa1.73□□□□□ -2.13
LSM12YHR121W YLR173WQ06247 608 aa1.73□□□□□ -2.13
LSM12YHR121W SWC7Q06707 132 aa1.73□□□□□ -2.13
LSM12YHR121W STP22P25604 385 aa1.72□□□□□ -2.13
LSM12YHR121W TAH1P25638 111 aaPredicted RBP1.72□□□□□ -2.13
LSM12YHR121W ADE1P27616 306 aa1.72□□□□□ -2.13
LSM12YHR121W MGM101P32787 269 aaKnown RBP1.72□□□□□ -2.13
LSM12YHR121W RIB1P38066 345 aa1.72□□□□□ -2.13
LSM12YHR121W TOS8P53147 276 aa1.72□□□□□ -2.13
LSM12YHR121W MRPL50P53724 139 aa1.72□□□□□ -2.13
LSM12YHR121W SSQ1Q05931 657 aaPredicted RBP1.72□□□□□ -2.13
LSM12YHR121W RIO1Q12196 484 aaKnown RBP1.72□□□□□ -2.13
LSM12YHR121W SEY1Q99287 776 aa1.72□□□□□ -2.13
LSM12YHR121W CDC8P00572 216 aa1.71□□□□□ -2.14
LSM12YHR121W YHR214C-DP0CX93 97 aa1.71□□□□□ -2.14
LSM12YHR121W APA2P22108 325 aa1.71□□□□□ -2.14
LSM12YHR121W YPR174CQ06616 221 aaPredicted RBP1.71□□□□□ -2.14
LSM12YHR121W OCA6Q12454 224 aa1.71□□□□□ -2.14
LSM12YHR121W EFG1Q3E705 233 aaKnown RBP1.71□□□□□ -2.14
LSM12YHR121W YSF3P0C074 85 aaPredicted RBP1.7□□□□□ -2.14
LSM12YHR121W YER121WP40076 114 aa1.7□□□□□ -2.14
LSM12YHR121W RPL33BP41056 107 aaKnown RBP1.7□□□□□ -2.14
LSM12YHR121W YFR035CP43608 114 aa1.7□□□□□ -2.14
LSM12YHR121W UPS2P35200 230 aa1.69□□□□□ -2.14
LSM12YHR121W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
LSM12YHR121W KRE28Q04431 385 aa1.69□□□□□ -2.14
LSM12YHR121W YPR170W-BP0C5R9 85 aa1.68□□□□□ -2.14
LSM12YHR121W CLG1P35190 452 aa1.68□□□□□ -2.14
LSM12YHR121W LDB7P38210 180 aa1.68□□□□□ -2.14
LSM12YHR121W ABF2Q02486 183 aa1.68□□□□□ -2.14
LSM12YHR121W GPA2P10823 449 aa1.67□□□□□ -2.14
LSM12YHR121W PEX17P40155 199 aa1.67□□□□□ -2.14
LSM12YHR121W RFC4P40339 323 aaKnown RBP1.67□□□□□ -2.14
LSM12YHR121W TIR3P40552 269 aa1.67□□□□□ -2.14
LSM12YHR121W YJR149WP47177 404 aa1.67□□□□□ -2.14
LSM12YHR121W YLR460CP54007 376 aa1.67□□□□□ -2.14
LSM12YHR121W SED1Q01589 338 aa1.67□□□□□ -2.14
LSM12YHR121W MRPL25P23369 157 aa1.66□□□□□ -2.14
LSM12YHR121W SUI1P32911 108 aaKnown RBP1.66□□□□□ -2.14
LSM12YHR121W SOL1P50278 321 aa1.66□□□□□ -2.14
LSM12YHR121W TIM13P53299 105 aa1.66□□□□□ -2.14
LSM12YHR121W PRP11Q07350 266 aaPredicted RBP1.66□□□□□ -2.14
LSM12YHR121W PSF1Q12488 208 aa1.66□□□□□ -2.14
LSM12YHR121W RPL35AP0CX84 120 aaKnown RBP1.65□□□□□ -2.15
LSM12YHR121W RPL35BP0CX85 120 aaKnown RBP1.65□□□□□ -2.15
LSM12YHR121W MATALPHA2P0CY08 210 aa1.65□□□□□ -2.15
LSM12YHR121W HMLALPHA2P0CY09 210 aa1.65□□□□□ -2.15
LSM12YHR121W TRS20P38334 175 aa1.65□□□□□ -2.15
LSM12YHR121W CUE1P38428 203 aa1.65□□□□□ -2.15
LSM12YHR121W PGD1P40356 397 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms