Protein–RNA interactions for Protein: P40552

TIR3, Cell wall protein TIR3, yeastyeast

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIR3P40552 NSR1YGR159C 1245 nt17.94■□□□□ 0.46
TIR3P40552 YML009W-BYML009W-B 477 nt17.76■□□□□ 0.43
TIR3P40552 NOP1YDL014W 984 nt17.26■□□□□ 0.35
TIR3P40552 MDJ1YFL016C 1536 nt16.01■□□□□ 0.15
TIR3P40552 YKL036CYKL036C 393 nt15.72■□□□□ 0.11
TIR3P40552 Q0297Q0297 156 nt15.09■□□□□ 0.01
TIR3P40552 SRX1YKL086W 384 nt15.09■□□□□ 0.01
TIR3P40552 YJL027CYJL027C 417 nt14.79□□□□□ -0.04
TIR3P40552 YCR051WYCR051W 669 nt14.22□□□□□ -0.13
TIR3P40552 SCS3YGL126W 1143 nt14.19□□□□□ -0.14
TIR3P40552 DBP2YNL112W 1641 nt14.17□□□□□ -0.14
TIR3P40552 SSA3YBL075C 1950 nt14.12□□□□□ -0.15
TIR3P40552 YBR190WYBR190W 312 nt13.79□□□□□ -0.2
TIR3P40552 TRN1tP(UGG)A 72 nt13.77□□□□□ -0.21
TIR3P40552 SUF9tP(UGG)F 72 nt13.77□□□□□ -0.21
TIR3P40552 SUF8tP(UGG)H 72 nt13.77□□□□□ -0.21
TIR3P40552 tP(UGG)LtP(UGG)L 72 nt13.77□□□□□ -0.21
TIR3P40552 SUF7tP(UGG)M 72 nt13.77□□□□□ -0.21
TIR3P40552 tP(UGG)N1tP(UGG)N1 72 nt13.77□□□□□ -0.21
TIR3P40552 tP(UGG)N2tP(UGG)N2 72 nt13.77□□□□□ -0.21
TIR3P40552 tP(UGG)O1tP(UGG)O1 72 nt13.77□□□□□ -0.21
TIR3P40552 SUF11tP(UGG)O2 72 nt13.77□□□□□ -0.21
TIR3P40552 YOL085CYOL085C 342 nt13.64□□□□□ -0.23
TIR3P40552 RPP1BYDL130W 321 nt13.51□□□□□ -0.25
TIR3P40552 CCC1YLR220W 969 nt13.51□□□□□ -0.25
TIR3P40552 PKP1YIL042C 1185 nt13.37□□□□□ -0.27
TIR3P40552 RTC3YHR087W 336 nt13.36□□□□□ -0.27
TIR3P40552 RVS167YDR388W 1449 nt13.23□□□□□ -0.29
TIR3P40552 SCJ1YMR214W 1134 nt13.13□□□□□ -0.31
TIR3P40552 PUT4YOR348C 1884 nt12.93□□□□□ -0.34
TIR3P40552 tP(UGG)O3tP(UGG)O3 72 nt12.93□□□□□ -0.34
TIR3P40552 PET122YER153C 765 nt12.89□□□□□ -0.35
TIR3P40552 SHR5YOL110W 714 nt12.76□□□□□ -0.37
TIR3P40552 SCR1SCR1 522 nt12.69□□□□□ -0.38
TIR3P40552 ATS1YAL020C 1002 nt12.66□□□□□ -0.38
TIR3P40552 YDJ1YNL064C 1230 nt12.56□□□□□ -0.4
TIR3P40552 SPT5YML010W 3192 nt12.52□□□□□ -0.41
TIR3P40552 RRN5YLR141W 1092 nt12.5□□□□□ -0.41
TIR3P40552 URN1YPR152C 1398 nt12.48□□□□□ -0.41
TIR3P40552 ARE1YCR048W 1833 nt12.44□□□□□ -0.42
TIR3P40552 OPI9YLR338W 858 nt12.4□□□□□ -0.42
TIR3P40552 POA1YBR022W 534 nt12.39□□□□□ -0.43
TIR3P40552 SSA4YER103W 1929 nt12.37□□□□□ -0.43
TIR3P40552 DEP1YAL013W 1218 nt12.36□□□□□ -0.43
TIR3P40552 SAH1YER043C 1350 nt12.31□□□□□ -0.44
TIR3P40552 BSC6YOL137W 1494 nt12.3□□□□□ -0.44
TIR3P40552 RPN10YHR200W 807 nt12.27□□□□□ -0.45
TIR3P40552 YER088W-BYER088W-B 147 nt12.26□□□□□ -0.45
TIR3P40552 YHR049C-AYHR049C-A 297 nt12.23□□□□□ -0.45
TIR3P40552 YNL208WYNL208W 600 nt12.23□□□□□ -0.45
TIR3P40552 GAR1YHR089C 618 nt12.22□□□□□ -0.45
TIR3P40552 RSB1YOR049C 1065 nt12.14□□□□□ -0.47
TIR3P40552 BDF1YLR399C 2061 nt12.04□□□□□ -0.48
TIR3P40552 PUN1YLR414C 792 nt12.02□□□□□ -0.49
TIR3P40552 YJR018WYJR018W 363 nt11.91□□□□□ -0.5
TIR3P40552 PTC2YER089C 1395 nt11.87□□□□□ -0.51
TIR3P40552 TIR1YER011W 765 nt11.86□□□□□ -0.51
TIR3P40552 TAT1YBR069C 1860 nt11.86□□□□□ -0.51
TIR3P40552 BUD23YCR047C 828 nt11.82□□□□□ -0.52
TIR3P40552 PST2YDR032C 597 nt11.79□□□□□ -0.52
TIR3P40552 NAB2YGL122C 1578 nt11.78□□□□□ -0.52
TIR3P40552 SSA1YAL005C 1929 nt11.76□□□□□ -0.53
TIR3P40552 YJR120WYJR120W 351 nt11.73□□□□□ -0.53
TIR3P40552 PAC11YDR488C 1602 nt11.71□□□□□ -0.54
TIR3P40552 MEP2YNL142W 1500 nt11.65□□□□□ -0.54
TIR3P40552 RPP2BYDR382W 333 nt11.6□□□□□ -0.55
TIR3P40552 FIS1YIL065C 468 nt11.59□□□□□ -0.55
TIR3P40552 DAL1YIR027C 1383 nt11.58□□□□□ -0.56
TIR3P40552 INM2YDR287W 879 nt11.55□□□□□ -0.56
TIR3P40552 SRB2YHR041C 633 nt11.52□□□□□ -0.57
TIR3P40552 NVJ2YPR091C 2313 nt11.5□□□□□ -0.57
TIR3P40552 PHO4YFR034C 939 nt11.46□□□□□ -0.57
TIR3P40552 DCW1YKL046C 1350 nt11.45□□□□□ -0.58
TIR3P40552 FPR4YLR449W 1179 nt11.44□□□□□ -0.58
TIR3P40552 YBR220CYBR220C 1683 nt11.38□□□□□ -0.59
TIR3P40552 BDH2YAL061W 1254 nt11.37□□□□□ -0.59
TIR3P40552 YBL100CYBL100C 315 nt11.36□□□□□ -0.59
TIR3P40552 YPS1YLR120C 1710 nt11.34□□□□□ -0.59
TIR3P40552 SHU1YHL006C 453 nt11.31□□□□□ -0.6
TIR3P40552 WWM1YFL010C 636 nt11.28□□□□□ -0.6
TIR3P40552 EMI2YDR516C 1503 nt11.25□□□□□ -0.61
TIR3P40552 YDR095CYDR095C 411 nt11.25□□□□□ -0.61
TIR3P40552 FUN26YAL022C 1554 nt11.23□□□□□ -0.61
TIR3P40552 LSM3YLR438C-A 270 nt11.22□□□□□ -0.61
TIR3P40552 YGR021WYGR021W 873 nt11.2□□□□□ -0.62
TIR3P40552 YMR090WYMR090W 684 nt11.18□□□□□ -0.62
TIR3P40552 TRM9YML014W 840 nt11.17□□□□□ -0.62
TIR3P40552 YHR165W-AYHR165W-A 312 nt11.16□□□□□ -0.62
TIR3P40552 YKL097CYKL097C 411 nt11.16□□□□□ -0.62
TIR3P40552 SDH1YKL148C 1923 nt11.15□□□□□ -0.62
TIR3P40552 PCH2YBR186W 1695 nt11.15□□□□□ -0.62
TIR3P40552 YFL021C-AYFL021C-A 855 nt11.15□□□□□ -0.62
TIR3P40552 HOM6YJR139C 1080 nt11.15□□□□□ -0.62
TIR3P40552 GUT2YIL155C 1950 nt11.14□□□□□ -0.63
TIR3P40552 YAL037C-BYAL037C-B 975 nt11.14□□□□□ -0.63
TIR3P40552 YDL221WYDL221W 552 nt11.13□□□□□ -0.63
TIR3P40552 CCT6YDR188W 1641 nt11.12□□□□□ -0.63
TIR3P40552 ALF1YNL148C 765 nt11.07□□□□□ -0.64
TIR3P40552 SEC11YIR022W 504 nt11.04□□□□□ -0.64
TIR3P40552 PIB2YGL023C 1908 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms