RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W MTC1P47018 478 aaKnown RBP20.07■□□□□ 0.8
LSM12YHR121W DRS1P32892 752 aaKnown RBP19.34■□□□□ 0.69
LSM12YHR121W FAP1P53971 965 aa17.44■□□□□ 0.38
LSM12YHR121W DIP2Q12220 943 aaPredicted RBP16.73■□□□□ 0.27
LSM12YHR121W PRI1P10363 409 aa16.57■□□□□ 0.24
LSM12YHR121W ISW2Q08773 1120 aa16.57■□□□□ 0.24
LSM12YHR121W AAD16Q02895 342 aa16.43■□□□□ 0.22
LSM12YHR121W BFR2Q06631 534 aaKnown RBP16.37■□□□□ 0.21
LSM12YHR121W PRY3P47033 881 aa16.34■□□□□ 0.21
LSM12YHR121W RPG1P38249 964 aaKnown RBP16.3■□□□□ 0.2
LSM12YHR121W AVT3P36062 692 aa16.25■□□□□ 0.19
LSM12YHR121W RSE1Q04693 1361 aaKnown RBP16.05■□□□□ 0.16
LSM12YHR121W TSR3Q12094 313 aaKnown RBP15.69■□□□□ 0.1
LSM12YHR121W RPL17AP05740 184 aaKnown RBP15.47■□□□□ 0.07
LSM12YHR121W RPL17BP46990 184 aaKnown RBP15.47■□□□□ 0.07
LSM12YHR121W REB1P21538 810 aa15.4■□□□□ 0.06
LSM12YHR121W HAA1Q12753 694 aaKnown RBP15.4■□□□□ 0.06
LSM12YHR121W YCK3P39962 524 aa15.3■□□□□ 0.04
LSM12YHR121W MRPL32P25348 183 aa15.14■□□□□ 0.01
LSM12YHR121W SPT21P35209 758 aa14.81□□□□□ -0.04
LSM12YHR121W TFA1P36100 482 aa14.81□□□□□ -0.04
LSM12YHR121W YKR023WP36119 530 aaKnown RBP14.5□□□□□ -0.09
LSM12YHR121W RIM101P33400 625 aa14.43□□□□□ -0.1
LSM12YHR121W CDC27P38042 758 aa14.39□□□□□ -0.11
LSM12YHR121W YGL015CP33199 130 aa14.35□□□□□ -0.11
LSM12YHR121W TFC8Q12308 588 aa14.24□□□□□ -0.13
LSM12YHR121W HOP09932 586 aa14.22□□□□□ -0.13
LSM12YHR121W DCD1P06773 312 aa14.12□□□□□ -0.15
LSM12YHR121W UBP10P53874 792 aaPredicted RBP14□□□□□ -0.17
LSM12YHR121W OXP1P28273 1286 aa13.92□□□□□ -0.18
LSM12YHR121W MAP2P38174 421 aaKnown RBP13.91□□□□□ -0.18
LSM12YHR121W YIL055CP40523 627 aaKnown RBP13.84□□□□□ -0.19
LSM12YHR121W PTP3P40048 928 aa13.8□□□□□ -0.2
LSM12YHR121W BCH2P36122 765 aa13.78□□□□□ -0.2
LSM12YHR121W SCY1P53009 804 aa13.76□□□□□ -0.21
LSM12YHR121W YAH1Q12184 172 aaKnown RBP13.67□□□□□ -0.22
LSM12YHR121W RSM7P47150 247 aa13.59□□□□□ -0.23
LSM12YHR121W SLX5P32828 619 aaKnown RBP13.58□□□□□ -0.24
LSM12YHR121W EPS1P40557 701 aa13.5□□□□□ -0.25
LSM12YHR121W TIF4632P39936 914 aaKnown RBP13.47□□□□□ -0.25
LSM12YHR121W SSP1P38871 571 aa13.45□□□□□ -0.26
LSM12YHR121W BBC1P47068 1157 aa13.45□□□□□ -0.26
LSM12YHR121W YLR271WQ06152 274 aa13.43□□□□□ -0.26
LSM12YHR121W BDF1P35817 686 aa13.42□□□□□ -0.26
LSM12YHR121W AI2P03876 854 aa13.41□□□□□ -0.26
LSM12YHR121W ARP8Q12386 881 aaKnown RBP RIP-Chip data13.39□□□□□ -0.27not detected
LSM12YHR121W TGL3P40308 642 aa13.34□□□□□ -0.27
LSM12YHR121W PSD2P53037 1138 aaKnown RBP13.18□□□□□ -0.3
LSM12YHR121W MGA2P40578 1113 aa13.08□□□□□ -0.32
LSM12YHR121W CST9Q06032 482 aa12.98□□□□□ -0.33
LSM12YHR121W MRM1P25270 412 aa12.96□□□□□ -0.33
LSM12YHR121W NSR1P27476 414 aaKnown RBP RIP-Chip data12.95□□□□□ -0.34 RIP-Chip
LSM12YHR121W YAP5P40574 245 aa12.88□□□□□ -0.35
LSM12YHR121W YOR238WQ08634 303 aa12.87□□□□□ -0.35
LSM12YHR121W BUD31P25337 157 aaPredicted RBP12.86□□□□□ -0.35
LSM12YHR121W MST1P07236 462 aa12.81□□□□□ -0.36
LSM12YHR121W UBP9P39967 754 aa12.81□□□□□ -0.36
LSM12YHR121W RTG3P38165 486 aa12.75□□□□□ -0.37
LSM12YHR121W YMR1P47147 688 aaKnown RBP RIP-Chip data12.63□□□□□ -0.39not detected
LSM12YHR121W VPS29P38759 282 aa12.62□□□□□ -0.39
LSM12YHR121W RCR1P38212 213 aa12.6□□□□□ -0.39
LSM12YHR121W GTT3P39996 337 aa12.6□□□□□ -0.39
LSM12YHR121W PIB1Q06651 286 aa12.58□□□□□ -0.4
LSM12YHR121W DBP1P24784 617 aaKnown RBP12.54□□□□□ -0.4
LSM12YHR121W YBL029C-AQ3E756 94 aa12.52□□□□□ -0.41
LSM12YHR121W STS1P38637 319 aa12.48□□□□□ -0.41
LSM12YHR121W YFR006WP43590 535 aa12.48□□□□□ -0.41
LSM12YHR121W WSC3Q12215 556 aa12.46□□□□□ -0.41
LSM12YHR121W VNX1P42839 908 aa12.42□□□□□ -0.42
LSM12YHR121W RAM2P29703 316 aa12.39□□□□□ -0.43
LSM12YHR121W VMA1P17255 1071 aaKnown RBP12.36□□□□□ -0.43
LSM12YHR121W SPP1Q03012 353 aa12.36□□□□□ -0.43
LSM12YHR121W SIS1P25294 352 aaKnown RBP12.35□□□□□ -0.43
LSM12YHR121W MAK11P20484 414 aaKnown RBP12.34□□□□□ -0.43
LSM12YHR121W MSB4Q12317 492 aa12.31□□□□□ -0.44
LSM12YHR121W TIF11P38912 153 aaKnown RBP12.29□□□□□ -0.44
LSM12YHR121W YOL036WQ08206 761 aa12.26□□□□□ -0.45
LSM12YHR121W SAM3Q08986 587 aa12.26□□□□□ -0.45
LSM12YHR121W SET4P42948 560 aa12.24□□□□□ -0.45
LSM12YHR121W EAP1P36041 632 aaKnown RBP12.22□□□□□ -0.45
LSM12YHR121W MIF2P35201 549 aa12.21□□□□□ -0.45
LSM12YHR121W ULI1P43604 169 aa12.19□□□□□ -0.46
LSM12YHR121W ABP1P15891 592 aaKnown RBP12.15□□□□□ -0.46
LSM12YHR121W COQ8P27697 501 aa12.15□□□□□ -0.46
LSM12YHR121W GYP5Q12344 894 aa12.15□□□□□ -0.46
LSM12YHR121W EDS1P38073 919 aa12.09□□□□□ -0.47
LSM12YHR121W GRE2Q12068 342 aaKnown RBP12.09□□□□□ -0.47
LSM12YHR121W IOC2Q12072 812 aa12.08□□□□□ -0.48
LSM12YHR121W LDB19Q12502 818 aa12.08□□□□□ -0.48
LSM12YHR121W TRP5P00931 707 aaKnown RBP12.07□□□□□ -0.48
LSM12YHR121W PTC3P34221 468 aaKnown RBP12.06□□□□□ -0.48
LSM12YHR121W NOP53Q12080 455 aaKnown RBP12.04□□□□□ -0.48
LSM12YHR121W HTA1P04911 132 aaKnown RBP12.03□□□□□ -0.48
LSM12YHR121W HTA2P04912 132 aa12.03□□□□□ -0.48
LSM12YHR121W ATH1P48016 1211 aa12.03□□□□□ -0.48
LSM12YHR121W DCW1P36091 449 aa12.02□□□□□ -0.49
LSM12YHR121W FKH1P40466 484 aa12□□□□□ -0.49
LSM12YHR121W GUT1P32190 709 aa11.98□□□□□ -0.49
LSM12YHR121W SET1P38827 1080 aaKnown RBP11.98□□□□□ -0.49
LSM12YHR121W YNL035CP53962 389 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms