Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 NSR1YGR159C 1245 nt14.3□□□□□ -0.12
RPF1P38805 YML009W-BYML009W-B 477 nt13.71□□□□□ -0.21
RPF1P38805 NOP1YDL014W 984 nt13.35□□□□□ -0.27
RPF1P38805 MDJ1YFL016C 1536 nt13.2□□□□□ -0.3
RPF1P38805 SSA3YBL075C 1950 nt12.83□□□□□ -0.36
RPF1P38805 YJL027CYJL027C 417 nt12.17□□□□□ -0.46
RPF1P38805 YKL036CYKL036C 393 nt12□□□□□ -0.49
RPF1P38805 SRX1YKL086W 384 nt11.56□□□□□ -0.56
RPF1P38805 YBR190WYBR190W 312 nt11.53□□□□□ -0.56
RPF1P38805 Q0297Q0297 156 nt11.51□□□□□ -0.57
RPF1P38805 DBP2YNL112W 1641 nt11.46□□□□□ -0.58
RPF1P38805 RTC3YHR087W 336 nt11.15□□□□□ -0.62
RPF1P38805 PUT4YOR348C 1884 nt11.1□□□□□ -0.63
RPF1P38805 SSA4YER103W 1929 nt11□□□□□ -0.65
RPF1P38805 SPT5YML010W 3192 nt10.92□□□□□ -0.66
RPF1P38805 YCR051WYCR051W 669 nt10.9□□□□□ -0.66
RPF1P38805 PAC11YDR488C 1602 nt10.87□□□□□ -0.67
RPF1P38805 NVJ2YPR091C 2313 nt10.83□□□□□ -0.68
RPF1P38805 TRN1tP(UGG)A 72 nt10.76□□□□□ -0.69
RPF1P38805 SUF9tP(UGG)F 72 nt10.76□□□□□ -0.69
RPF1P38805 SUF8tP(UGG)H 72 nt10.76□□□□□ -0.69
RPF1P38805 tP(UGG)LtP(UGG)L 72 nt10.76□□□□□ -0.69
RPF1P38805 SUF7tP(UGG)M 72 nt10.76□□□□□ -0.69
RPF1P38805 tP(UGG)N1tP(UGG)N1 72 nt10.76□□□□□ -0.69
RPF1P38805 tP(UGG)N2tP(UGG)N2 72 nt10.76□□□□□ -0.69
RPF1P38805 tP(UGG)O1tP(UGG)O1 72 nt10.76□□□□□ -0.69
RPF1P38805 SUF11tP(UGG)O2 72 nt10.76□□□□□ -0.69
RPF1P38805 BDF1YLR399C 2061 nt10.71□□□□□ -0.69
RPF1P38805 FPS1YLL043W 2010 nt10.69□□□□□ -0.7
RPF1P38805 SCS3YGL126W 1143 nt10.68□□□□□ -0.7
RPF1P38805 RVS167YDR388W 1449 nt10.67□□□□□ -0.7
RPF1P38805 POA1YBR022W 534 nt10.63□□□□□ -0.71
RPF1P38805 BSC6YOL137W 1494 nt10.6□□□□□ -0.71
RPF1P38805 ARE1YCR048W 1833 nt10.58□□□□□ -0.72
RPF1P38805 CCC1YLR220W 969 nt10.55□□□□□ -0.72
RPF1P38805 TAT1YBR069C 1860 nt10.55□□□□□ -0.72
RPF1P38805 SSA1YAL005C 1929 nt10.46□□□□□ -0.73
RPF1P38805 YHR049C-AYHR049C-A 297 nt10.42□□□□□ -0.74
RPF1P38805 SCJ1YMR214W 1134 nt10.41□□□□□ -0.74
RPF1P38805 RPP1BYDL130W 321 nt10.32□□□□□ -0.76
RPF1P38805 YOL085CYOL085C 342 nt10.32□□□□□ -0.76
RPF1P38805 SAH1YER043C 1350 nt10.29□□□□□ -0.76
RPF1P38805 OPI9YLR338W 858 nt10.25□□□□□ -0.77
RPF1P38805 URN1YPR152C 1398 nt10.25□□□□□ -0.77
RPF1P38805 YJL225CYJL225C 5277 nt10.16□□□□□ -0.78
RPF1P38805 SHR5YOL110W 714 nt10.14□□□□□ -0.79
RPF1P38805 MEP2YNL142W 1500 nt10.09□□□□□ -0.79
RPF1P38805 BUD23YCR047C 828 nt10.08□□□□□ -0.8
RPF1P38805 PKP1YIL042C 1185 nt10.08□□□□□ -0.8
RPF1P38805 RPN10YHR200W 807 nt9.98□□□□□ -0.81
RPF1P38805 UME6YDR207C 2511 nt9.97□□□□□ -0.81
RPF1P38805 DEP1YAL013W 1218 nt9.96□□□□□ -0.82
RPF1P38805 PUN1YLR414C 792 nt9.96□□□□□ -0.82
RPF1P38805 tP(UGG)O3tP(UGG)O3 72 nt9.94□□□□□ -0.82
RPF1P38805 YBR220CYBR220C 1683 nt9.9□□□□□ -0.82
RPF1P38805 NAB2YGL122C 1578 nt9.9□□□□□ -0.82
RPF1P38805 PTC2YER089C 1395 nt9.89□□□□□ -0.83
RPF1P38805 DCW1YKL046C 1350 nt9.84□□□□□ -0.83
RPF1P38805 YNL208WYNL208W 600 nt9.83□□□□□ -0.84
RPF1P38805 PCH2YBR186W 1695 nt9.82□□□□□ -0.84
RPF1P38805 GUT2YIL155C 1950 nt9.81□□□□□ -0.84
RPF1P38805 SCR1SCR1 522 nt9.81□□□□□ -0.84
RPF1P38805 YMR090WYMR090W 684 nt9.8□□□□□ -0.84
RPF1P38805 RDN37-1RDN37-1 5354 nt9.8□□□□□ -0.84
RPF1P38805 RDN37-2RDN37-2 5354 nt9.8□□□□□ -0.84
RPF1P38805 PET122YER153C 765 nt9.77□□□□□ -0.85
RPF1P38805 SEC11YIR022W 504 nt9.75□□□□□ -0.85
RPF1P38805 EMI2YDR516C 1503 nt9.72□□□□□ -0.85
RPF1P38805 YJR018WYJR018W 363 nt9.72□□□□□ -0.85
RPF1P38805 YDJ1YNL064C 1230 nt9.68□□□□□ -0.86
RPF1P38805 FIS1YIL065C 468 nt9.67□□□□□ -0.86
RPF1P38805 SDH1YKL148C 1923 nt9.66□□□□□ -0.86
RPF1P38805 DAL1YIR027C 1383 nt9.63□□□□□ -0.87
RPF1P38805 PIB2YGL023C 1908 nt9.62□□□□□ -0.87
RPF1P38805 YPS1YLR120C 1710 nt9.6□□□□□ -0.87
RPF1P38805 BOR1YNL275W 1731 nt9.6□□□□□ -0.87
RPF1P38805 YDL221WYDL221W 552 nt9.57□□□□□ -0.88
RPF1P38805 PHO4YFR034C 939 nt9.53□□□□□ -0.88
RPF1P38805 ATS1YAL020C 1002 nt9.53□□□□□ -0.88
RPF1P38805 YHR165W-AYHR165W-A 312 nt9.52□□□□□ -0.89
RPF1P38805 INM2YDR287W 879 nt9.51□□□□□ -0.89
RPF1P38805 FPR4YLR449W 1179 nt9.51□□□□□ -0.89
RPF1P38805 RRN5YLR141W 1092 nt9.5□□□□□ -0.89
RPF1P38805 GAR1YHR089C 618 nt9.47□□□□□ -0.89
RPF1P38805 RTF1YGL244W 1677 nt9.47□□□□□ -0.89
RPF1P38805 YDR095CYDR095C 411 nt9.44□□□□□ -0.9
RPF1P38805 SCC4YER147C 1875 nt9.43□□□□□ -0.9
RPF1P38805 MCH5YOR306C 1566 nt9.41□□□□□ -0.9
RPF1P38805 YJR120WYJR120W 351 nt9.41□□□□□ -0.9
RPF1P38805 Q0182Q0182 405 nt9.4□□□□□ -0.9
RPF1P38805 RPP2BYDR382W 333 nt9.37□□□□□ -0.91
RPF1P38805 PTK1YKL198C 1989 nt9.33□□□□□ -0.92
RPF1P38805 CAC2YML102W 1407 nt9.33□□□□□ -0.92
RPF1P38805 BOP3YNL042W 1191 nt9.33□□□□□ -0.92
RPF1P38805 YSC84YHR016C 1407 nt9.31□□□□□ -0.92
RPF1P38805 YER088W-BYER088W-B 147 nt9.31□□□□□ -0.92
RPF1P38805 ALG12YNR030W 1656 nt9.27□□□□□ -0.93
RPF1P38805 PTP1YDL230W 1008 nt9.27□□□□□ -0.93
RPF1P38805 YBL100CYBL100C 315 nt9.27□□□□□ -0.93
RPF1P38805 RSB1YOR049C 1065 nt9.27□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms