Protein–RNA interactions for Protein: P38248

ECM33, Cell wall protein ECM33, yeastyeast

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM33P38248 YML009W-BYML009W-B 477 nt15.65■□□□□ 0.1
ECM33P38248 NSR1YGR159C 1245 nt15.64■□□□□ 0.09
ECM33P38248 NOP1YDL014W 984 nt15.34■□□□□ 0.05
ECM33P38248 YKL036CYKL036C 393 nt14.16□□□□□ -0.14
ECM33P38248 MDJ1YFL016C 1536 nt13.7□□□□□ -0.22
ECM33P38248 Q0297Q0297 156 nt13.44□□□□□ -0.26
ECM33P38248 SRX1YKL086W 384 nt13.39□□□□□ -0.27
ECM33P38248 YJL027CYJL027C 417 nt13.19□□□□□ -0.3
ECM33P38248 SCS3YGL126W 1143 nt12.85□□□□□ -0.35
ECM33P38248 YCR051WYCR051W 669 nt12.65□□□□□ -0.38
ECM33P38248 SSA3YBL075C 1950 nt12.45□□□□□ -0.42
ECM33P38248 YOL085CYOL085C 342 nt12.25□□□□□ -0.45
ECM33P38248 DBP2YNL112W 1641 nt12.19□□□□□ -0.46
ECM33P38248 RPP1BYDL130W 321 nt12.04□□□□□ -0.48
ECM33P38248 TRN1tP(UGG)A 72 nt12.04□□□□□ -0.48
ECM33P38248 SUF9tP(UGG)F 72 nt12.04□□□□□ -0.48
ECM33P38248 SUF8tP(UGG)H 72 nt12.04□□□□□ -0.48
ECM33P38248 tP(UGG)LtP(UGG)L 72 nt12.04□□□□□ -0.48
ECM33P38248 SUF7tP(UGG)M 72 nt12.04□□□□□ -0.48
ECM33P38248 tP(UGG)N1tP(UGG)N1 72 nt12.04□□□□□ -0.48
ECM33P38248 tP(UGG)N2tP(UGG)N2 72 nt12.04□□□□□ -0.48
ECM33P38248 tP(UGG)O1tP(UGG)O1 72 nt12.04□□□□□ -0.48
ECM33P38248 SUF11tP(UGG)O2 72 nt12.04□□□□□ -0.48
ECM33P38248 PKP1YIL042C 1185 nt11.99□□□□□ -0.49
ECM33P38248 CCC1YLR220W 969 nt11.89□□□□□ -0.51
ECM33P38248 YBR190WYBR190W 312 nt11.79□□□□□ -0.52
ECM33P38248 SCJ1YMR214W 1134 nt11.56□□□□□ -0.56
ECM33P38248 ATS1YAL020C 1002 nt11.55□□□□□ -0.56
ECM33P38248 RVS167YDR388W 1449 nt11.51□□□□□ -0.57
ECM33P38248 RTC3YHR087W 336 nt11.47□□□□□ -0.57
ECM33P38248 PET122YER153C 765 nt11.44□□□□□ -0.58
ECM33P38248 tP(UGG)O3tP(UGG)O3 72 nt11.42□□□□□ -0.58
ECM33P38248 SCR1SCR1 522 nt11.4□□□□□ -0.58
ECM33P38248 RRN5YLR141W 1092 nt11.16□□□□□ -0.62
ECM33P38248 SHR5YOL110W 714 nt11.11□□□□□ -0.63
ECM33P38248 YDJ1YNL064C 1230 nt11.09□□□□□ -0.63
ECM33P38248 YER088W-BYER088W-B 147 nt10.93□□□□□ -0.66
ECM33P38248 RSB1YOR049C 1065 nt10.9□□□□□ -0.66
ECM33P38248 PUT4YOR348C 1884 nt10.87□□□□□ -0.67
ECM33P38248 GAR1YHR089C 618 nt10.76□□□□□ -0.69
ECM33P38248 URN1YPR152C 1398 nt10.76□□□□□ -0.69
ECM33P38248 PST2YDR032C 597 nt10.71□□□□□ -0.69
ECM33P38248 SSA4YER103W 1929 nt10.71□□□□□ -0.69
ECM33P38248 DEP1YAL013W 1218 nt10.71□□□□□ -0.69
ECM33P38248 RPN10YHR200W 807 nt10.65□□□□□ -0.7
ECM33P38248 OPI9YLR338W 858 nt10.63□□□□□ -0.71
ECM33P38248 YNL208WYNL208W 600 nt10.63□□□□□ -0.71
ECM33P38248 SPT5YML010W 3192 nt10.61□□□□□ -0.71
ECM33P38248 PAC11YDR488C 1602 nt10.51□□□□□ -0.73
ECM33P38248 SAH1YER043C 1350 nt10.5□□□□□ -0.73
ECM33P38248 POA1YBR022W 534 nt10.44□□□□□ -0.74
ECM33P38248 TIR1YER011W 765 nt10.43□□□□□ -0.74
ECM33P38248 ARE1YCR048W 1833 nt10.42□□□□□ -0.74
ECM33P38248 BSC6YOL137W 1494 nt10.41□□□□□ -0.74
ECM33P38248 BDF1YLR399C 2061 nt10.4□□□□□ -0.75
ECM33P38248 PUN1YLR414C 792 nt10.32□□□□□ -0.76
ECM33P38248 NVJ2YPR091C 2313 nt10.3□□□□□ -0.76
ECM33P38248 YHR049C-AYHR049C-A 297 nt10.3□□□□□ -0.76
ECM33P38248 YJR018WYJR018W 363 nt10.29□□□□□ -0.76
ECM33P38248 YKL097CYKL097C 411 nt10.27□□□□□ -0.77
ECM33P38248 SSA1YAL005C 1929 nt10.27□□□□□ -0.77
ECM33P38248 TAT1YBR069C 1860 nt10.24□□□□□ -0.77
ECM33P38248 SHU1YHL006C 453 nt10.22□□□□□ -0.77
ECM33P38248 PTC2YER089C 1395 nt10.14□□□□□ -0.79
ECM33P38248 RPP2BYDR382W 333 nt10.11□□□□□ -0.79
ECM33P38248 YJR120WYJR120W 351 nt10.07□□□□□ -0.8
ECM33P38248 NAB2YGL122C 1578 nt10.05□□□□□ -0.8
ECM33P38248 BUD23YCR047C 828 nt10.03□□□□□ -0.8
ECM33P38248 SRB2YHR041C 633 nt10.03□□□□□ -0.8
ECM33P38248 YAL037C-BYAL037C-B 975 nt10.02□□□□□ -0.81
ECM33P38248 Q0182Q0182 405 nt10□□□□□ -0.81
ECM33P38248 INM2YDR287W 879 nt9.97□□□□□ -0.81
ECM33P38248 YGR021WYGR021W 873 nt9.96□□□□□ -0.82
ECM33P38248 WWM1YFL010C 636 nt9.95□□□□□ -0.82
ECM33P38248 FPS1YLL043W 2010 nt9.92□□□□□ -0.82
ECM33P38248 BDH2YAL061W 1254 nt9.92□□□□□ -0.82
ECM33P38248 DAL1YIR027C 1383 nt9.9□□□□□ -0.82
ECM33P38248 HOM6YJR139C 1080 nt9.89□□□□□ -0.83
ECM33P38248 MEP2YNL142W 1500 nt9.87□□□□□ -0.83
ECM33P38248 LSM3YLR438C-A 270 nt9.85□□□□□ -0.83
ECM33P38248 YFL021C-AYFL021C-A 855 nt9.84□□□□□ -0.83
ECM33P38248 FPR4YLR449W 1179 nt9.84□□□□□ -0.83
ECM33P38248 YOR139CYOR139C 393 nt9.84□□□□□ -0.83
ECM33P38248 FIS1YIL065C 468 nt9.83□□□□□ -0.84
ECM33P38248 YBL100CYBL100C 315 nt9.81□□□□□ -0.84
ECM33P38248 PHO4YFR034C 939 nt9.78□□□□□ -0.84
ECM33P38248 MNP1YGL068W 585 nt9.77□□□□□ -0.85
ECM33P38248 NPL3YDR432W 1245 nt9.76□□□□□ -0.85
ECM33P38248 RKM5YLR137W 1104 nt9.74□□□□□ -0.85
ECM33P38248 TRM9YML014W 840 nt9.74□□□□□ -0.85
ECM33P38248 YJL225CYJL225C 5277 nt9.73□□□□□ -0.85
ECM33P38248 YOL037CYOL037C 354 nt9.71□□□□□ -0.86
ECM33P38248 FUN26YAL022C 1554 nt9.71□□□□□ -0.86
ECM33P38248 DCW1YKL046C 1350 nt9.69□□□□□ -0.86
ECM33P38248 YBR220CYBR220C 1683 nt9.67□□□□□ -0.86
ECM33P38248 CCT6YDR188W 1641 nt9.62□□□□□ -0.87
ECM33P38248 RDN37-1RDN37-1 5354 nt9.61□□□□□ -0.87
ECM33P38248 RDN37-2RDN37-2 5354 nt9.61□□□□□ -0.87
ECM33P38248 YPS1YLR120C 1710 nt9.6□□□□□ -0.87
ECM33P38248 PCH2YBR186W 1695 nt9.58□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms