Protein–RNA interactions for Protein: P19812

UBR1, E3 ubiquitin-protein ligase UBR1, yeastyeast

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBR1P19812 YML009W-BYML009W-B 477 nt20.74■□□□□ 0.91
UBR1P19812 NSR1YGR159C 1245 nt20.08■□□□□ 0.81
UBR1P19812 NOP1YDL014W 984 nt19.61■□□□□ 0.73
UBR1P19812 YKL036CYKL036C 393 nt18.61■□□□□ 0.57
UBR1P19812 MDJ1YFL016C 1536 nt18.08■□□□□ 0.49
UBR1P19812 SRX1YKL086W 384 nt17.75■□□□□ 0.43
UBR1P19812 Q0297Q0297 156 nt17.55■□□□□ 0.4
UBR1P19812 YJL027CYJL027C 417 nt17.31■□□□□ 0.36
UBR1P19812 SCS3YGL126W 1143 nt17.17■□□□□ 0.34
UBR1P19812 YCR051WYCR051W 669 nt16.69■□□□□ 0.26
UBR1P19812 DBP2YNL112W 1641 nt16.1■□□□□ 0.17
UBR1P19812 PKP1YIL042C 1185 nt15.96■□□□□ 0.15
UBR1P19812 TRN1tP(UGG)A 72 nt15.93■□□□□ 0.14
UBR1P19812 SUF9tP(UGG)F 72 nt15.93■□□□□ 0.14
UBR1P19812 SUF8tP(UGG)H 72 nt15.93■□□□□ 0.14
UBR1P19812 tP(UGG)LtP(UGG)L 72 nt15.93■□□□□ 0.14
UBR1P19812 SUF7tP(UGG)M 72 nt15.93■□□□□ 0.14
UBR1P19812 tP(UGG)N1tP(UGG)N1 72 nt15.93■□□□□ 0.14
UBR1P19812 tP(UGG)N2tP(UGG)N2 72 nt15.93■□□□□ 0.14
UBR1P19812 tP(UGG)O1tP(UGG)O1 72 nt15.93■□□□□ 0.14
UBR1P19812 SUF11tP(UGG)O2 72 nt15.93■□□□□ 0.14
UBR1P19812 YOL085CYOL085C 342 nt15.93■□□□□ 0.14
UBR1P19812 CCC1YLR220W 969 nt15.62■□□□□ 0.09
UBR1P19812 RPP1BYDL130W 321 nt15.6■□□□□ 0.09
UBR1P19812 SCJ1YMR214W 1134 nt15.24■□□□□ 0.03
UBR1P19812 ATS1YAL020C 1002 nt15.15■□□□□ 0.02
UBR1P19812 YBR190WYBR190W 312 nt15.11■□□□□ 0.01
UBR1P19812 PET122YER153C 765 nt15.1■□□□□ 0.01
UBR1P19812 tP(UGG)O3tP(UGG)O3 72 nt14.97□□□□□ -0.01
UBR1P19812 RVS167YDR388W 1449 nt14.93□□□□□ -0.02
UBR1P19812 SCR1SCR1 522 nt14.87□□□□□ -0.03
UBR1P19812 RTC3YHR087W 336 nt14.72□□□□□ -0.05
UBR1P19812 RRN5YLR141W 1092 nt14.66□□□□□ -0.06
UBR1P19812 RSB1YOR049C 1065 nt14.48□□□□□ -0.09
UBR1P19812 SHR5YOL110W 714 nt14.46□□□□□ -0.09
UBR1P19812 YER088W-BYER088W-B 147 nt14.34□□□□□ -0.11
UBR1P19812 YDJ1YNL064C 1230 nt14.31□□□□□ -0.12
UBR1P19812 DEP1YAL013W 1218 nt14.25□□□□□ -0.13
UBR1P19812 GAR1YHR089C 618 nt14.15□□□□□ -0.14
UBR1P19812 URN1YPR152C 1398 nt14.15□□□□□ -0.14
UBR1P19812 PST2YDR032C 597 nt14.04□□□□□ -0.16
UBR1P19812 SSA3YBL075C 1950 nt13.99□□□□□ -0.17
UBR1P19812 SAH1YER043C 1350 nt13.81□□□□□ -0.2
UBR1P19812 OPI9YLR338W 858 nt13.77□□□□□ -0.21
UBR1P19812 PUT4YOR348C 1884 nt13.75□□□□□ -0.21
UBR1P19812 ARE1YCR048W 1833 nt13.74□□□□□ -0.21
UBR1P19812 YNL208WYNL208W 600 nt13.66□□□□□ -0.22
UBR1P19812 YKL097CYKL097C 411 nt13.63□□□□□ -0.23
UBR1P19812 YHR049C-AYHR049C-A 297 nt13.6□□□□□ -0.23
UBR1P19812 RPN10YHR200W 807 nt13.6□□□□□ -0.23
UBR1P19812 YAL037C-BYAL037C-B 975 nt13.57□□□□□ -0.24
UBR1P19812 TIR1YER011W 765 nt13.56□□□□□ -0.24
UBR1P19812 SHU1YHL006C 453 nt13.56□□□□□ -0.24
UBR1P19812 SRB2YHR041C 633 nt13.54□□□□□ -0.24
UBR1P19812 SSA1YAL005C 1929 nt13.53□□□□□ -0.24
UBR1P19812 YJR120WYJR120W 351 nt13.47□□□□□ -0.25
UBR1P19812 YJR018WYJR018W 363 nt13.43□□□□□ -0.26
UBR1P19812 POA1YBR022W 534 nt13.39□□□□□ -0.27
UBR1P19812 PUN1YLR414C 792 nt13.31□□□□□ -0.28
UBR1P19812 WWM1YFL010C 636 nt13.28□□□□□ -0.28
UBR1P19812 YOR139CYOR139C 393 nt13.27□□□□□ -0.28
UBR1P19812 BUD23YCR047C 828 nt13.25□□□□□ -0.29
UBR1P19812 MNP1YGL068W 585 nt13.16□□□□□ -0.3
UBR1P19812 PTC2YER089C 1395 nt13.15□□□□□ -0.31
UBR1P19812 BSC6YOL137W 1494 nt13.11□□□□□ -0.31
UBR1P19812 HOM6YJR139C 1080 nt13.04□□□□□ -0.32
UBR1P19812 NAB2YGL122C 1578 nt13□□□□□ -0.33
UBR1P19812 RPP2BYDR382W 333 nt13□□□□□ -0.33
UBR1P19812 FIS1YIL065C 468 nt12.96□□□□□ -0.33
UBR1P19812 BDH2YAL061W 1254 nt12.94□□□□□ -0.34
UBR1P19812 YGR021WYGR021W 873 nt12.94□□□□□ -0.34
UBR1P19812 NPL3YDR432W 1245 nt12.91□□□□□ -0.34
UBR1P19812 YFL021C-AYFL021C-A 855 nt12.87□□□□□ -0.35
UBR1P19812 PHO4YFR034C 939 nt12.83□□□□□ -0.35
UBR1P19812 YBL100CYBL100C 315 nt12.78□□□□□ -0.36
UBR1P19812 YOL037CYOL037C 354 nt12.77□□□□□ -0.37
UBR1P19812 FPR4YLR449W 1179 nt12.72□□□□□ -0.37
UBR1P19812 SPT5YML010W 3192 nt12.7□□□□□ -0.38
UBR1P19812 DAL1YIR027C 1383 nt12.69□□□□□ -0.38
UBR1P19812 INM2YDR287W 879 nt12.68□□□□□ -0.38
UBR1P19812 RKM5YLR137W 1104 nt12.66□□□□□ -0.38
UBR1P19812 TRM9YML014W 840 nt12.63□□□□□ -0.39
UBR1P19812 LSM3YLR438C-A 270 nt12.54□□□□□ -0.4
UBR1P19812 YPS1YLR120C 1710 nt12.54□□□□□ -0.4
UBR1P19812 SSA4YER103W 1929 nt12.5□□□□□ -0.41
UBR1P19812 WHI5YOR083W 888 nt12.5□□□□□ -0.41
UBR1P19812 YDR095CYDR095C 411 nt12.49□□□□□ -0.41
UBR1P19812 FUN26YAL022C 1554 nt12.47□□□□□ -0.41
UBR1P19812 YLR281CYLR281C 468 nt12.45□□□□□ -0.42
UBR1P19812 PUS2YGL063W 1113 nt12.45□□□□□ -0.42
UBR1P19812 CCT6YDR188W 1641 nt12.44□□□□□ -0.42
UBR1P19812 tM(CAU)CtM(CAU)C 72 nt12.43□□□□□ -0.42
UBR1P19812 IMT4tM(CAU)E 72 nt12.43□□□□□ -0.42
UBR1P19812 IMT3tM(CAU)J3 72 nt12.43□□□□□ -0.42
UBR1P19812 IMT1tM(CAU)O1 72 nt12.43□□□□□ -0.42
UBR1P19812 IMT2tM(CAU)P 72 nt12.43□□□□□ -0.42
UBR1P19812 YLR154C-GYLR154C-G 150 nt12.43□□□□□ -0.42
UBR1P19812 YPR011CYPR011C 981 nt12.38□□□□□ -0.43
UBR1P19812 ALF1YNL148C 765 nt12.36□□□□□ -0.43
UBR1P19812 SUF2tP(AGG)C 72 nt12.34□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms