RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A PLP1Q04004 230 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A GRX8Q05926 109 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A SMD2Q06217 110 aaKnown RBP0.94□□□□□ -2.26
YHL009W-AYHL009W-A GGA1Q06336 557 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A YLR031WQ07978 186 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A AKR2Q12013 749 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A EMC6Q12431 108 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A MHT1Q12525 324 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A TSC3Q3E790 80 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A YPR014CQ6B0W2 109 aa0.94□□□□□ -2.26
YHL009W-AYHL009W-A FKS1P38631 1876 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A YHR139C-AO13536 103 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YLR156WP0CE96 114 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YLR159WP0CE97 114 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YLR161WP0CE98 114 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A CCA1P21269 546 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A UTP30P36144 274 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A MAK5P38112 773 aaPredicted RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A FES1P38260 290 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A AME1P38313 324 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YHL026CP38740 315 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A NVJ1P38881 321 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A AVT2P39981 480 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YER076CP40049 302 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A SNX4P47057 423 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YNL247WP53852 767 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A AIM34Q03673 198 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A YDR249CQ03787 373 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A HPT1Q04178 221 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A SHH4Q06236 168 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A RIO1Q12196 484 aaKnown RBP0.93□□□□□ -2.26
YHL009W-AYHL009W-A PEX11Q12462 236 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A PSF1Q12488 208 aa0.93□□□□□ -2.26
YHL009W-AYHL009W-A REP2P03872 296 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A CMD1P06787 147 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A RPB3P16370 318 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A GRX2P17695 143 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A MRPS28P21771 286 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A CNB1P25296 175 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A YCR090CP25654 182 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A SCM4P32564 187 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A SEC17P32602 292 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A FIG1P38224 298 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A PGD1P40356 397 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A YKE4P40544 346 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A CIS3P47001 227 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A UBC12P52491 188 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A ARO8P53090 500 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A YNL140CP53910 189 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A NUP49Q02199 472 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A SWP1Q02795 286 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A MAK3Q03503 176 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A ARO80Q04052 950 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A TRM12Q04235 462 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A HNT1Q04344 158 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A YMR315WQ04869 349 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A DGA1Q08650 418 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A YLR050CQ12155 161 aaKnown RBP0.92□□□□□ -2.26
YHL009W-AYHL009W-A YFR032C-BQ8TGU2 87 aa0.92□□□□□ -2.26
YHL009W-AYHL009W-A CPA1P07258 411 aaKnown RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A PET9P18239 318 aaKnown RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A ARO7P32178 256 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A UBC6P33296 250 aaPredicted RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A SNC2P33328 115 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A PAN3P36102 679 aaPredicted RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A TVP38P36164 337 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A MRPL17P36528 281 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A OPY1P38271 328 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A YER121WP40076 114 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A YER134CP40081 178 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A ICE2P40499 491 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A SMD3P43321 101 aaKnown RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A YFH7P43591 353 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A SKI6P46948 246 aaPredicted RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A ARP3P47117 449 aaKnown RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A SBH2P52871 88 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A YGR219WP53307 113 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A TMA20P89886 181 aaPredicted RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A YDR476CQ03362 224 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A RRP17Q04031 235 aaPredicted RBP0.91□□□□□ -2.26
YHL009W-AYHL009W-A DYN3Q04949 312 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A NEJ1Q06148 342 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A YLR053CQ12026 108 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A MCP1Q12106 302 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A YOR342CQ12182 319 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A ATO3Q12359 275 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A PET20Q99373 253 aa0.91□□□□□ -2.26
YHL009W-AYHL009W-A TIM9O74700 87 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A RPS28BP0C0X0 67 aaKnown RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A AHC2P25649 128 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A PEX4P29340 183 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A MEI4P29467 408 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A OCH1P31755 480 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A MDH3P32419 343 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
YHL009W-AYHL009W-A YKL102CP34249 101 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A CLG1P35190 452 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A YET1P35723 206 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A SRP102P36057 244 aaPredicted RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A YKR041WP36134 250 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 100.2 ms