Protein–RNA interactions for Protein: P38881

NVJ1, Nucleus-vacuole junction protein 1, yeastyeast

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NVJ1P38881 NSR1YGR159C 1245 nt18.24■□□□□ 0.51
NVJ1P38881 YML009W-BYML009W-B 477 nt17.94■□□□□ 0.46
NVJ1P38881 NOP1YDL014W 984 nt17.26■□□□□ 0.35
NVJ1P38881 MDJ1YFL016C 1536 nt16.63■□□□□ 0.25
NVJ1P38881 YKL036CYKL036C 393 nt15.48■□□□□ 0.07
NVJ1P38881 YJL027CYJL027C 417 nt15.32■□□□□ 0.04
NVJ1P38881 SRX1YKL086W 384 nt15.08■□□□□ 0
NVJ1P38881 Q0297Q0297 156 nt14.95□□□□□ -0.02
NVJ1P38881 DBP2YNL112W 1641 nt14.52□□□□□ -0.09
NVJ1P38881 YBR190WYBR190W 312 nt14.32□□□□□ -0.12
NVJ1P38881 YCR051WYCR051W 669 nt14.26□□□□□ -0.13
NVJ1P38881 RTC3YHR087W 336 nt13.97□□□□□ -0.17
NVJ1P38881 TRN1tP(UGG)A 72 nt13.91□□□□□ -0.18
NVJ1P38881 SUF9tP(UGG)F 72 nt13.91□□□□□ -0.18
NVJ1P38881 SUF8tP(UGG)H 72 nt13.91□□□□□ -0.18
NVJ1P38881 tP(UGG)LtP(UGG)L 72 nt13.91□□□□□ -0.18
NVJ1P38881 SUF7tP(UGG)M 72 nt13.91□□□□□ -0.18
NVJ1P38881 tP(UGG)N1tP(UGG)N1 72 nt13.91□□□□□ -0.18
NVJ1P38881 tP(UGG)N2tP(UGG)N2 72 nt13.91□□□□□ -0.18
NVJ1P38881 tP(UGG)O1tP(UGG)O1 72 nt13.91□□□□□ -0.18
NVJ1P38881 SUF11tP(UGG)O2 72 nt13.91□□□□□ -0.18
NVJ1P38881 SCS3YGL126W 1143 nt13.83□□□□□ -0.2
NVJ1P38881 CCC1YLR220W 969 nt13.75□□□□□ -0.21
NVJ1P38881 SSA3YBL075C 1950 nt13.61□□□□□ -0.23
NVJ1P38881 RVS167YDR388W 1449 nt13.57□□□□□ -0.24
NVJ1P38881 RPP1BYDL130W 321 nt13.41□□□□□ -0.26
NVJ1P38881 YOL085CYOL085C 342 nt13.41□□□□□ -0.26
NVJ1P38881 SCJ1YMR214W 1134 nt13.38□□□□□ -0.27
NVJ1P38881 PUT4YOR348C 1884 nt13.36□□□□□ -0.27
NVJ1P38881 PKP1YIL042C 1185 nt13.25□□□□□ -0.29
NVJ1P38881 tP(UGG)O3tP(UGG)O3 72 nt13□□□□□ -0.33
NVJ1P38881 SHR5YOL110W 714 nt12.98□□□□□ -0.33
NVJ1P38881 ARE1YCR048W 1833 nt12.97□□□□□ -0.33
NVJ1P38881 URN1YPR152C 1398 nt12.91□□□□□ -0.34
NVJ1P38881 POA1YBR022W 534 nt12.89□□□□□ -0.35
NVJ1P38881 PET122YER153C 765 nt12.86□□□□□ -0.35
NVJ1P38881 SAH1YER043C 1350 nt12.85□□□□□ -0.35
NVJ1P38881 OPI9YLR338W 858 nt12.82□□□□□ -0.36
NVJ1P38881 YHR049C-AYHR049C-A 297 nt12.81□□□□□ -0.36
NVJ1P38881 DEP1YAL013W 1218 nt12.75□□□□□ -0.37
NVJ1P38881 BSC6YOL137W 1494 nt12.71□□□□□ -0.38
NVJ1P38881 RPN10YHR200W 807 nt12.62□□□□□ -0.39
NVJ1P38881 SCR1SCR1 522 nt12.62□□□□□ -0.39
NVJ1P38881 YDJ1YNL064C 1230 nt12.59□□□□□ -0.39
NVJ1P38881 YNL208WYNL208W 600 nt12.52□□□□□ -0.41
NVJ1P38881 BUD23YCR047C 828 nt12.47□□□□□ -0.41
NVJ1P38881 SPT5YML010W 3192 nt12.45□□□□□ -0.42
NVJ1P38881 PUN1YLR414C 792 nt12.45□□□□□ -0.42
NVJ1P38881 RRN5YLR141W 1092 nt12.44□□□□□ -0.42
NVJ1P38881 GAR1YHR089C 618 nt12.37□□□□□ -0.43
NVJ1P38881 PTC2YER089C 1395 nt12.36□□□□□ -0.43
NVJ1P38881 YJR018WYJR018W 363 nt12.29□□□□□ -0.44
NVJ1P38881 NAB2YGL122C 1578 nt12.28□□□□□ -0.44
NVJ1P38881 SSA4YER103W 1929 nt12.25□□□□□ -0.45
NVJ1P38881 ATS1YAL020C 1002 nt12.23□□□□□ -0.45
NVJ1P38881 YER088W-BYER088W-B 147 nt12.19□□□□□ -0.46
NVJ1P38881 FIS1YIL065C 468 nt12.05□□□□□ -0.48
NVJ1P38881 RSB1YOR049C 1065 nt12.05□□□□□ -0.48
NVJ1P38881 DAL1YIR027C 1383 nt12.03□□□□□ -0.48
NVJ1P38881 MEP2YNL142W 1500 nt11.99□□□□□ -0.49
NVJ1P38881 TIR1YER011W 765 nt11.98□□□□□ -0.49
NVJ1P38881 YJR120WYJR120W 351 nt11.98□□□□□ -0.49
NVJ1P38881 FPR4YLR449W 1179 nt11.98□□□□□ -0.49
NVJ1P38881 SSA1YAL005C 1929 nt11.92□□□□□ -0.5
NVJ1P38881 INM2YDR287W 879 nt11.92□□□□□ -0.5
NVJ1P38881 RPP2BYDR382W 333 nt11.92□□□□□ -0.5
NVJ1P38881 PHO4YFR034C 939 nt11.91□□□□□ -0.5
NVJ1P38881 YPS1YLR120C 1710 nt11.85□□□□□ -0.51
NVJ1P38881 BDF1YLR399C 2061 nt11.82□□□□□ -0.52
NVJ1P38881 DCW1YKL046C 1350 nt11.77□□□□□ -0.53
NVJ1P38881 YHR165W-AYHR165W-A 312 nt11.75□□□□□ -0.53
NVJ1P38881 YBL100CYBL100C 315 nt11.72□□□□□ -0.53
NVJ1P38881 YDR095CYDR095C 411 nt11.7□□□□□ -0.54
NVJ1P38881 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
NVJ1P38881 EMI2YDR516C 1503 nt11.62□□□□□ -0.55
NVJ1P38881 SRB2YHR041C 633 nt11.62□□□□□ -0.55
NVJ1P38881 YMR090WYMR090W 684 nt11.6□□□□□ -0.55
NVJ1P38881 BDH2YAL061W 1254 nt11.59□□□□□ -0.55
NVJ1P38881 FUN26YAL022C 1554 nt11.56□□□□□ -0.56
NVJ1P38881 YBR220CYBR220C 1683 nt11.55□□□□□ -0.56
NVJ1P38881 ALF1YNL148C 765 nt11.51□□□□□ -0.57
NVJ1P38881 YDL221WYDL221W 552 nt11.5□□□□□ -0.57
NVJ1P38881 PAC11YDR488C 1602 nt11.49□□□□□ -0.57
NVJ1P38881 RPP2AYOL039W 321 nt11.48□□□□□ -0.57
NVJ1P38881 PTP1YDL230W 1008 nt11.47□□□□□ -0.57
NVJ1P38881 CAC2YML102W 1407 nt11.46□□□□□ -0.57
NVJ1P38881 TRM9YML014W 840 nt11.46□□□□□ -0.57
NVJ1P38881 SDH1YKL148C 1923 nt11.45□□□□□ -0.58
NVJ1P38881 NVJ2YPR091C 2313 nt11.42□□□□□ -0.58
NVJ1P38881 PST2YDR032C 597 nt11.41□□□□□ -0.58
NVJ1P38881 WWM1YFL010C 636 nt11.37□□□□□ -0.59
NVJ1P38881 CCT6YDR188W 1641 nt11.37□□□□□ -0.59
NVJ1P38881 LSM3YLR438C-A 270 nt11.35□□□□□ -0.59
NVJ1P38881 SIS1YNL007C 1059 nt11.33□□□□□ -0.6
NVJ1P38881 SUF2tP(AGG)C 72 nt11.32□□□□□ -0.6
NVJ1P38881 SUF10tP(AGG)N 72 nt11.32□□□□□ -0.6
NVJ1P38881 SCC4YER147C 1875 nt11.31□□□□□ -0.6
NVJ1P38881 IRC15YPL017C 1500 nt11.3□□□□□ -0.6
NVJ1P38881 SEC11YIR022W 504 nt11.23□□□□□ -0.61
NVJ1P38881 PCH2YBR186W 1695 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms