Protein–RNA interactions for Protein: P40544

YKE4, Zinc transporter YKE4, yeastyeast

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKE4P40544 NSR1YGR159C 1245 nt17.58■□□□□ 0.4
YKE4P40544 YML009W-BYML009W-B 477 nt17.11■□□□□ 0.33
YKE4P40544 MDJ1YFL016C 1536 nt16.32■□□□□ 0.2
YKE4P40544 NOP1YDL014W 984 nt16.31■□□□□ 0.2
YKE4P40544 YJL027CYJL027C 417 nt14.94□□□□□ -0.02
YKE4P40544 YKL036CYKL036C 393 nt14.43□□□□□ -0.1
YKE4P40544 SRX1YKL086W 384 nt14.27□□□□□ -0.13
YKE4P40544 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
YKE4P40544 DBP2YNL112W 1641 nt14.18□□□□□ -0.14
YKE4P40544 Q0297Q0297 156 nt14.08□□□□□ -0.16
YKE4P40544 YBR190WYBR190W 312 nt14.05□□□□□ -0.16
YKE4P40544 RTC3YHR087W 336 nt13.7□□□□□ -0.22
YKE4P40544 YCR051WYCR051W 669 nt13.49□□□□□ -0.25
YKE4P40544 PUT4YOR348C 1884 nt13.34□□□□□ -0.27
YKE4P40544 TRN1tP(UGG)A 72 nt13.33□□□□□ -0.28
YKE4P40544 SUF9tP(UGG)F 72 nt13.33□□□□□ -0.28
YKE4P40544 SUF8tP(UGG)H 72 nt13.33□□□□□ -0.28
YKE4P40544 tP(UGG)LtP(UGG)L 72 nt13.33□□□□□ -0.28
YKE4P40544 SUF7tP(UGG)M 72 nt13.33□□□□□ -0.28
YKE4P40544 tP(UGG)N1tP(UGG)N1 72 nt13.33□□□□□ -0.28
YKE4P40544 tP(UGG)N2tP(UGG)N2 72 nt13.33□□□□□ -0.28
YKE4P40544 tP(UGG)O1tP(UGG)O1 72 nt13.33□□□□□ -0.28
YKE4P40544 SUF11tP(UGG)O2 72 nt13.33□□□□□ -0.28
YKE4P40544 CCC1YLR220W 969 nt13.19□□□□□ -0.3
YKE4P40544 RVS167YDR388W 1449 nt13.09□□□□□ -0.31
YKE4P40544 SCJ1YMR214W 1134 nt12.96□□□□□ -0.33
YKE4P40544 ARE1YCR048W 1833 nt12.89□□□□□ -0.35
YKE4P40544 POA1YBR022W 534 nt12.84□□□□□ -0.35
YKE4P40544 SCS3YGL126W 1143 nt12.81□□□□□ -0.36
YKE4P40544 BSC6YOL137W 1494 nt12.71□□□□□ -0.38
YKE4P40544 SPT5YML010W 3192 nt12.7□□□□□ -0.38
YKE4P40544 YHR049C-AYHR049C-A 297 nt12.7□□□□□ -0.38
YKE4P40544 SAH1YER043C 1350 nt12.66□□□□□ -0.38
YKE4P40544 RPP1BYDL130W 321 nt12.64□□□□□ -0.39
YKE4P40544 URN1YPR152C 1398 nt12.58□□□□□ -0.4
YKE4P40544 SSA4YER103W 1929 nt12.55□□□□□ -0.4
YKE4P40544 OPI9YLR338W 858 nt12.54□□□□□ -0.4
YKE4P40544 YOL085CYOL085C 342 nt12.54□□□□□ -0.4
YKE4P40544 SHR5YOL110W 714 nt12.49□□□□□ -0.41
YKE4P40544 PKP1YIL042C 1185 nt12.45□□□□□ -0.42
YKE4P40544 DEP1YAL013W 1218 nt12.4□□□□□ -0.42
YKE4P40544 tP(UGG)O3tP(UGG)O3 72 nt12.38□□□□□ -0.43
YKE4P40544 BUD23YCR047C 828 nt12.34□□□□□ -0.43
YKE4P40544 RPN10YHR200W 807 nt12.19□□□□□ -0.46
YKE4P40544 PET122YER153C 765 nt12.18□□□□□ -0.46
YKE4P40544 BDF1YLR399C 2061 nt12.17□□□□□ -0.46
YKE4P40544 PTC2YER089C 1395 nt12.15□□□□□ -0.46
YKE4P40544 PUN1YLR414C 792 nt12.14□□□□□ -0.47
YKE4P40544 YNL208WYNL208W 600 nt12.1□□□□□ -0.47
YKE4P40544 NAB2YGL122C 1578 nt12.07□□□□□ -0.48
YKE4P40544 MEP2YNL142W 1500 nt12□□□□□ -0.49
YKE4P40544 TAT1YBR069C 1860 nt11.97□□□□□ -0.49
YKE4P40544 YDJ1YNL064C 1230 nt11.96□□□□□ -0.49
YKE4P40544 YJR018WYJR018W 363 nt11.95□□□□□ -0.5
YKE4P40544 FIS1YIL065C 468 nt11.87□□□□□ -0.51
YKE4P40544 GAR1YHR089C 618 nt11.83□□□□□ -0.52
YKE4P40544 DCW1YKL046C 1350 nt11.82□□□□□ -0.52
YKE4P40544 SCR1SCR1 522 nt11.81□□□□□ -0.52
YKE4P40544 DAL1YIR027C 1383 nt11.79□□□□□ -0.52
YKE4P40544 RRN5YLR141W 1092 nt11.75□□□□□ -0.53
YKE4P40544 FPR4YLR449W 1179 nt11.74□□□□□ -0.53
YKE4P40544 PAC11YDR488C 1602 nt11.73□□□□□ -0.53
YKE4P40544 YPS1YLR120C 1710 nt11.72□□□□□ -0.53
YKE4P40544 PHO4YFR034C 939 nt11.69□□□□□ -0.54
YKE4P40544 YJR120WYJR120W 351 nt11.69□□□□□ -0.54
YKE4P40544 YBR220CYBR220C 1683 nt11.65□□□□□ -0.54
YKE4P40544 EMI2YDR516C 1503 nt11.61□□□□□ -0.55
YKE4P40544 YHR165W-AYHR165W-A 312 nt11.6□□□□□ -0.55
YKE4P40544 INM2YDR287W 879 nt11.58□□□□□ -0.56
YKE4P40544 YMR090WYMR090W 684 nt11.53□□□□□ -0.56
YKE4P40544 YDR095CYDR095C 411 nt11.52□□□□□ -0.57
YKE4P40544 YER088W-BYER088W-B 147 nt11.51□□□□□ -0.57
YKE4P40544 SSA1YAL005C 1929 nt11.5□□□□□ -0.57
YKE4P40544 RPP2BYDR382W 333 nt11.49□□□□□ -0.57
YKE4P40544 SDH1YKL148C 1923 nt11.47□□□□□ -0.57
YKE4P40544 YDL221WYDL221W 552 nt11.47□□□□□ -0.57
YKE4P40544 TIR1YER011W 765 nt11.46□□□□□ -0.57
YKE4P40544 CAC2YML102W 1407 nt11.41□□□□□ -0.58
YKE4P40544 YBL100CYBL100C 315 nt11.39□□□□□ -0.59
YKE4P40544 NVJ2YPR091C 2313 nt11.38□□□□□ -0.59
YKE4P40544 PCH2YBR186W 1695 nt11.37□□□□□ -0.59
YKE4P40544 PTP1YDL230W 1008 nt11.36□□□□□ -0.59
YKE4P40544 GUT2YIL155C 1950 nt11.36□□□□□ -0.59
YKE4P40544 SCC4YER147C 1875 nt11.29□□□□□ -0.6
YKE4P40544 RPP2AYOL039W 321 nt11.29□□□□□ -0.6
YKE4P40544 RSB1YOR049C 1065 nt11.28□□□□□ -0.6
YKE4P40544 SEC11YIR022W 504 nt11.27□□□□□ -0.61
YKE4P40544 ATS1YAL020C 1002 nt11.25□□□□□ -0.61
YKE4P40544 FUN26YAL022C 1554 nt11.24□□□□□ -0.61
YKE4P40544 IRC15YPL017C 1500 nt11.24□□□□□ -0.61
YKE4P40544 SRB2YHR041C 633 nt11.22□□□□□ -0.61
YKE4P40544 PIB2YGL023C 1908 nt11.21□□□□□ -0.62
YKE4P40544 ALF1YNL148C 765 nt11.19□□□□□ -0.62
YKE4P40544 BDH2YAL061W 1254 nt11.17□□□□□ -0.62
YKE4P40544 GIS3YLR094C 1509 nt11.17□□□□□ -0.62
YKE4P40544 YSC84YHR016C 1407 nt11.13□□□□□ -0.63
YKE4P40544 TRM9YML014W 840 nt11.07□□□□□ -0.64
YKE4P40544 SIS1YNL007C 1059 nt11.07□□□□□ -0.64
YKE4P40544 YHL050CYHL050C 2094 nt11.07□□□□□ -0.64
YKE4P40544 RTF1YGL244W 1677 nt11.04□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms