Protein–RNA interactions for Protein: P47001

CIS3, Cell wall mannoprotein CIS3, yeastyeast

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIS3P47001 YML009W-BYML009W-B 477 nt19.95■□□□□ 0.78
CIS3P47001 NSR1YGR159C 1245 nt19.56■□□□□ 0.72
CIS3P47001 NOP1YDL014W 984 nt19.53■□□□□ 0.72
CIS3P47001 YKL036CYKL036C 393 nt18.34■□□□□ 0.53
CIS3P47001 Q0297Q0297 156 nt17.24■□□□□ 0.35
CIS3P47001 YJL027CYJL027C 417 nt17.17■□□□□ 0.34
CIS3P47001 SRX1YKL086W 384 nt17.09■□□□□ 0.33
CIS3P47001 MDJ1YFL016C 1536 nt17.07■□□□□ 0.32
CIS3P47001 SCS3YGL126W 1143 nt16.88■□□□□ 0.29
CIS3P47001 YCR051WYCR051W 669 nt16.21■□□□□ 0.19
CIS3P47001 YOL085CYOL085C 342 nt15.9■□□□□ 0.14
CIS3P47001 PKP1YIL042C 1185 nt15.6■□□□□ 0.09
CIS3P47001 RPP1BYDL130W 321 nt15.46■□□□□ 0.07
CIS3P47001 SCJ1YMR214W 1134 nt15.37■□□□□ 0.05
CIS3P47001 TRN1tP(UGG)A 72 nt15.27■□□□□ 0.04
CIS3P47001 SUF9tP(UGG)F 72 nt15.27■□□□□ 0.04
CIS3P47001 SUF8tP(UGG)H 72 nt15.27■□□□□ 0.04
CIS3P47001 tP(UGG)LtP(UGG)L 72 nt15.27■□□□□ 0.04
CIS3P47001 SUF7tP(UGG)M 72 nt15.27■□□□□ 0.04
CIS3P47001 tP(UGG)N1tP(UGG)N1 72 nt15.27■□□□□ 0.04
CIS3P47001 tP(UGG)N2tP(UGG)N2 72 nt15.27■□□□□ 0.04
CIS3P47001 tP(UGG)O1tP(UGG)O1 72 nt15.27■□□□□ 0.04
CIS3P47001 SUF11tP(UGG)O2 72 nt15.27■□□□□ 0.04
CIS3P47001 DBP2YNL112W 1641 nt15.27■□□□□ 0.03
CIS3P47001 ATS1YAL020C 1002 nt15.19■□□□□ 0.02
CIS3P47001 CCC1YLR220W 969 nt15.08■□□□□ 0
CIS3P47001 PET122YER153C 765 nt14.74□□□□□ -0.05
CIS3P47001 SCR1SCR1 522 nt14.63□□□□□ -0.07
CIS3P47001 tP(UGG)O3tP(UGG)O3 72 nt14.55□□□□□ -0.08
CIS3P47001 YBR190WYBR190W 312 nt14.46□□□□□ -0.09
CIS3P47001 RVS167YDR388W 1449 nt14.36□□□□□ -0.11
CIS3P47001 RRN5YLR141W 1092 nt14.34□□□□□ -0.11
CIS3P47001 RTC3YHR087W 336 nt14.12□□□□□ -0.15
CIS3P47001 RSB1YOR049C 1065 nt14.11□□□□□ -0.15
CIS3P47001 YER088W-BYER088W-B 147 nt14.08□□□□□ -0.16
CIS3P47001 YDJ1YNL064C 1230 nt14.08□□□□□ -0.16
CIS3P47001 PST2YDR032C 597 nt14.03□□□□□ -0.16
CIS3P47001 SHR5YOL110W 714 nt13.97□□□□□ -0.17
CIS3P47001 GAR1YHR089C 618 nt13.68□□□□□ -0.22
CIS3P47001 YKL097CYKL097C 411 nt13.61□□□□□ -0.23
CIS3P47001 DEP1YAL013W 1218 nt13.45□□□□□ -0.26
CIS3P47001 SHU1YHL006C 453 nt13.38□□□□□ -0.27
CIS3P47001 URN1YPR152C 1398 nt13.36□□□□□ -0.27
CIS3P47001 YNL208WYNL208W 600 nt13.28□□□□□ -0.28
CIS3P47001 TIR1YER011W 765 nt13.22□□□□□ -0.29
CIS3P47001 RPN10YHR200W 807 nt13.22□□□□□ -0.29
CIS3P47001 OPI9YLR338W 858 nt13.12□□□□□ -0.31
CIS3P47001 YAL037C-BYAL037C-B 975 nt13.05□□□□□ -0.32
CIS3P47001 YOR139CYOR139C 393 nt13.05□□□□□ -0.32
CIS3P47001 SSA1YAL005C 1929 nt13.01□□□□□ -0.33
CIS3P47001 SAH1YER043C 1350 nt12.94□□□□□ -0.34
CIS3P47001 SRB2YHR041C 633 nt12.91□□□□□ -0.34
CIS3P47001 PUT4YOR348C 1884 nt12.9□□□□□ -0.34
CIS3P47001 NPL3YDR432W 1245 nt12.8□□□□□ -0.36
CIS3P47001 ARE1YCR048W 1833 nt12.77□□□□□ -0.37
CIS3P47001 YJR018WYJR018W 363 nt12.77□□□□□ -0.37
CIS3P47001 PUN1YLR414C 792 nt12.73□□□□□ -0.37
CIS3P47001 YJR120WYJR120W 351 nt12.72□□□□□ -0.37
CIS3P47001 HOM6YJR139C 1080 nt12.72□□□□□ -0.37
CIS3P47001 YGR021WYGR021W 873 nt12.71□□□□□ -0.37
CIS3P47001 WWM1YFL010C 636 nt12.7□□□□□ -0.38
CIS3P47001 MNP1YGL068W 585 nt12.69□□□□□ -0.38
CIS3P47001 YOL037CYOL037C 354 nt12.61□□□□□ -0.39
CIS3P47001 YHR049C-AYHR049C-A 297 nt12.58□□□□□ -0.4
CIS3P47001 RPP2BYDR382W 333 nt12.57□□□□□ -0.4
CIS3P47001 RKM5YLR137W 1104 nt12.53□□□□□ -0.4
CIS3P47001 SSA3YBL075C 1950 nt12.52□□□□□ -0.4
CIS3P47001 tM(CAU)CtM(CAU)C 72 nt12.52□□□□□ -0.41
CIS3P47001 IMT4tM(CAU)E 72 nt12.52□□□□□ -0.41
CIS3P47001 IMT3tM(CAU)J3 72 nt12.52□□□□□ -0.41
CIS3P47001 IMT1tM(CAU)O1 72 nt12.52□□□□□ -0.41
CIS3P47001 IMT2tM(CAU)P 72 nt12.52□□□□□ -0.41
CIS3P47001 PTC2YER089C 1395 nt12.52□□□□□ -0.41
CIS3P47001 YFL021C-AYFL021C-A 855 nt12.49□□□□□ -0.41
CIS3P47001 POA1YBR022W 534 nt12.49□□□□□ -0.41
CIS3P47001 BDH2YAL061W 1254 nt12.42□□□□□ -0.42
CIS3P47001 LSM3YLR438C-A 270 nt12.33□□□□□ -0.44
CIS3P47001 YLR281CYLR281C 468 nt12.31□□□□□ -0.44
CIS3P47001 NAB2YGL122C 1578 nt12.3□□□□□ -0.44
CIS3P47001 BUD23YCR047C 828 nt12.29□□□□□ -0.44
CIS3P47001 INM2YDR287W 879 nt12.27□□□□□ -0.45
CIS3P47001 PUS2YGL063W 1113 nt12.27□□□□□ -0.45
CIS3P47001 DAL1YIR027C 1383 nt12.21□□□□□ -0.45
CIS3P47001 FIS1YIL065C 468 nt12.21□□□□□ -0.45
CIS3P47001 YBL100CYBL100C 315 nt12.21□□□□□ -0.45
CIS3P47001 WHI5YOR083W 888 nt12.21□□□□□ -0.45
CIS3P47001 BSC6YOL137W 1494 nt12.17□□□□□ -0.46
CIS3P47001 FPR4YLR449W 1179 nt12.15□□□□□ -0.46
CIS3P47001 MOT3YMR070W 1473 nt12.14□□□□□ -0.47
CIS3P47001 PHO4YFR034C 939 nt12.1□□□□□ -0.47
CIS3P47001 TRM9YML014W 840 nt12.1□□□□□ -0.47
CIS3P47001 FUN26YAL022C 1554 nt12.09□□□□□ -0.47
CIS3P47001 YPR011CYPR011C 981 nt12.03□□□□□ -0.48
CIS3P47001 CCT6YDR188W 1641 nt12□□□□□ -0.49
CIS3P47001 DSK2YMR276W 1122 nt11.98□□□□□ -0.49
CIS3P47001 FMP45YDL222C 930 nt11.97□□□□□ -0.49
CIS3P47001 YLR236CYLR236C 324 nt11.97□□□□□ -0.49
CIS3P47001 YLR154C-GYLR154C-G 150 nt11.95□□□□□ -0.5
CIS3P47001 IMP2'YIL154C 1041 nt11.92□□□□□ -0.5
CIS3P47001 YCH1YGR203W 447 nt11.87□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms