Protein–RNA interactions for Protein: P32419

MDH3, Malate dehydrogenase, peroxisomal, yeastyeast

Known RBP RIP-Chip data

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MDH3P32419 NSR1YGR159C 1245 nt18.3■□□□□ 0.52
MDH3P32419 YML009W-BYML009W-B 477 nt18.24■□□□□ 0.51
MDH3P32419 NOP1YDL014W 984 nt17.67■□□□□ 0.42
MDH3P32419 MDJ1YFL016C 1536 nt16.41■□□□□ 0.22
MDH3P32419 YKL036CYKL036C 393 nt16.14■□□□□ 0.17
MDH3P32419 SRX1YKL086W 384 nt15.44■□□□□ 0.06
MDH3P32419 Q0297Q0297 156 nt15.43■□□□□ 0.06
MDH3P32419 YJL027CYJL027C 417 nt15.12■□□□□ 0.01
MDH3P32419 YCR051WYCR051W 669 nt14.61□□□□□ -0.07
MDH3P32419 SCS3YGL126W 1143 nt14.6□□□□□ -0.07
MDH3P32419 DBP2YNL112W 1641 nt14.47□□□□□ -0.09
MDH3P32419 TRN1tP(UGG)A 72 nt14.08□□□□□ -0.16
MDH3P32419 SUF9tP(UGG)F 72 nt14.08□□□□□ -0.16
MDH3P32419 SUF8tP(UGG)H 72 nt14.08□□□□□ -0.16
MDH3P32419 tP(UGG)LtP(UGG)L 72 nt14.08□□□□□ -0.16
MDH3P32419 SUF7tP(UGG)M 72 nt14.08□□□□□ -0.16
MDH3P32419 tP(UGG)N1tP(UGG)N1 72 nt14.08□□□□□ -0.16
MDH3P32419 tP(UGG)N2tP(UGG)N2 72 nt14.08□□□□□ -0.16
MDH3P32419 tP(UGG)O1tP(UGG)O1 72 nt14.08□□□□□ -0.16
MDH3P32419 SUF11tP(UGG)O2 72 nt14.08□□□□□ -0.16
MDH3P32419 YBR190WYBR190W 312 nt14.05□□□□□ -0.16
MDH3P32419 YOL085CYOL085C 342 nt13.98□□□□□ -0.17
MDH3P32419 CCC1YLR220W 969 nt13.9□□□□□ -0.18
MDH3P32419 RPP1BYDL130W 321 nt13.83□□□□□ -0.2
MDH3P32419 PKP1YIL042C 1185 nt13.77□□□□□ -0.21
MDH3P32419 RTC3YHR087W 336 nt13.7□□□□□ -0.22
MDH3P32419 RVS167YDR388W 1449 nt13.55□□□□□ -0.24
MDH3P32419 SCJ1YMR214W 1134 nt13.45□□□□□ -0.26
MDH3P32419 tP(UGG)O3tP(UGG)O3 72 nt13.25□□□□□ -0.29
MDH3P32419 PET122YER153C 765 nt13.23□□□□□ -0.29
MDH3P32419 SCR1SCR1 522 nt13.04□□□□□ -0.32
MDH3P32419 SHR5YOL110W 714 nt13.04□□□□□ -0.32
MDH3P32419 ATS1YAL020C 1002 nt13□□□□□ -0.33
MDH3P32419 PUT4YOR348C 1884 nt12.91□□□□□ -0.34
MDH3P32419 YDJ1YNL064C 1230 nt12.83□□□□□ -0.36
MDH3P32419 RRN5YLR141W 1092 nt12.82□□□□□ -0.36
MDH3P32419 URN1YPR152C 1398 nt12.78□□□□□ -0.36
MDH3P32419 DEP1YAL013W 1218 nt12.7□□□□□ -0.38
MDH3P32419 OPI9YLR338W 858 nt12.64□□□□□ -0.39
MDH3P32419 ARE1YCR048W 1833 nt12.62□□□□□ -0.39
MDH3P32419 SSA3YBL075C 1950 nt12.61□□□□□ -0.39
MDH3P32419 SAH1YER043C 1350 nt12.58□□□□□ -0.4
MDH3P32419 YER088W-BYER088W-B 147 nt12.58□□□□□ -0.4
MDH3P32419 GAR1YHR089C 618 nt12.54□□□□□ -0.4
MDH3P32419 RPN10YHR200W 807 nt12.54□□□□□ -0.4
MDH3P32419 YNL208WYNL208W 600 nt12.5□□□□□ -0.41
MDH3P32419 RSB1YOR049C 1065 nt12.5□□□□□ -0.41
MDH3P32419 POA1YBR022W 534 nt12.45□□□□□ -0.42
MDH3P32419 YHR049C-AYHR049C-A 297 nt12.44□□□□□ -0.42
MDH3P32419 PUN1YLR414C 792 nt12.27□□□□□ -0.45
MDH3P32419 BSC6YOL137W 1494 nt12.23□□□□□ -0.45
MDH3P32419 YJR018WYJR018W 363 nt12.18□□□□□ -0.46
MDH3P32419 TIR1YER011W 765 nt12.15□□□□□ -0.46
MDH3P32419 PTC2YER089C 1395 nt12.14□□□□□ -0.47
MDH3P32419 BUD23YCR047C 828 nt12.12□□□□□ -0.47
MDH3P32419 PST2YDR032C 597 nt12.08□□□□□ -0.48
MDH3P32419 SSA1YAL005C 1929 nt12.05□□□□□ -0.48
MDH3P32419 NAB2YGL122C 1578 nt12.01□□□□□ -0.49
MDH3P32419 YJR120WYJR120W 351 nt11.97□□□□□ -0.49
MDH3P32419 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
MDH3P32419 FIS1YIL065C 468 nt11.85□□□□□ -0.51
MDH3P32419 SPT5YML010W 3192 nt11.85□□□□□ -0.51
MDH3P32419 DAL1YIR027C 1383 nt11.82□□□□□ -0.52
MDH3P32419 SRB2YHR041C 633 nt11.81□□□□□ -0.52
MDH3P32419 INM2YDR287W 879 nt11.76□□□□□ -0.53
MDH3P32419 FPR4YLR449W 1179 nt11.76□□□□□ -0.53
MDH3P32419 PHO4YFR034C 939 nt11.72□□□□□ -0.53
MDH3P32419 SHU1YHL006C 453 nt11.63□□□□□ -0.55
MDH3P32419 YBL100CYBL100C 315 nt11.63□□□□□ -0.55
MDH3P32419 BDH2YAL061W 1254 nt11.62□□□□□ -0.55
MDH3P32419 WWM1YFL010C 636 nt11.58□□□□□ -0.56
MDH3P32419 YPS1YLR120C 1710 nt11.56□□□□□ -0.56
MDH3P32419 YKL097CYKL097C 411 nt11.54□□□□□ -0.56
MDH3P32419 MEP2YNL142W 1500 nt11.51□□□□□ -0.57
MDH3P32419 FUN26YAL022C 1554 nt11.49□□□□□ -0.57
MDH3P32419 YAL037C-BYAL037C-B 975 nt11.48□□□□□ -0.57
MDH3P32419 YGR021WYGR021W 873 nt11.47□□□□□ -0.57
MDH3P32419 SSA4YER103W 1929 nt11.46□□□□□ -0.58
MDH3P32419 YDR095CYDR095C 411 nt11.45□□□□□ -0.58
MDH3P32419 LSM3YLR438C-A 270 nt11.44□□□□□ -0.58
MDH3P32419 HOM6YJR139C 1080 nt11.42□□□□□ -0.58
MDH3P32419 TRM9YML014W 840 nt11.42□□□□□ -0.58
MDH3P32419 YFL021C-AYFL021C-A 855 nt11.41□□□□□ -0.58
MDH3P32419 YHR165W-AYHR165W-A 312 nt11.41□□□□□ -0.58
MDH3P32419 CCT6YDR188W 1641 nt11.35□□□□□ -0.59
MDH3P32419 MNP1YGL068W 585 nt11.33□□□□□ -0.6
MDH3P32419 ALF1YNL148C 765 nt11.33□□□□□ -0.6
MDH3P32419 DCW1YKL046C 1350 nt11.32□□□□□ -0.6
MDH3P32419 RKM5YLR137W 1104 nt11.25□□□□□ -0.61
MDH3P32419 SUF2tP(AGG)C 72 nt11.24□□□□□ -0.61
MDH3P32419 SUF10tP(AGG)N 72 nt11.24□□□□□ -0.61
MDH3P32419 RPP2AYOL039W 321 nt11.23□□□□□ -0.61
MDH3P32419 PTP1YDL230W 1008 nt11.22□□□□□ -0.61
MDH3P32419 SIS1YNL007C 1059 nt11.2□□□□□ -0.62
MDH3P32419 EMI2YDR516C 1503 nt11.18□□□□□ -0.62
MDH3P32419 CAC2YML102W 1407 nt11.14□□□□□ -0.63
MDH3P32419 YMR090WYMR090W 684 nt11.1□□□□□ -0.63
MDH3P32419 YDL221WYDL221W 552 nt11.09□□□□□ -0.63
MDH3P32419 YOL037CYOL037C 354 nt11.08□□□□□ -0.64
MDH3P32419 YOR139CYOR139C 393 nt11.08□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 94.2 ms