Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 SSA3YBL075C 1950 nt11.7□□□□□ -0.54
RPS28BP0C0X0 SSA1YAL005C 1929 nt10.68□□□□□ -0.7
RPS28BP0C0X0 FPS1YLL043W 2010 nt10.48□□□□□ -0.73
RPS28BP0C0X0 NVJ2YPR091C 2313 nt10.29□□□□□ -0.76
RPS28BP0C0X0 PAC11YDR488C 1602 nt10.25□□□□□ -0.77
RPS28BP0C0X0 Q0182Q0182 405 nt10.02□□□□□ -0.81
RPS28BP0C0X0 RPM1RPM1 483 nt9.57□□□□□ -0.88
RPS28BP0C0X0 SSA4YER103W 1929 nt9.44□□□□□ -0.9
RPS28BP0C0X0 UME6YDR207C 2511 nt9.37□□□□□ -0.91
RPS28BP0C0X0 BDF1YLR399C 2061 nt9.24□□□□□ -0.93
RPS28BP0C0X0 TAT1YBR069C 1860 nt9.06□□□□□ -0.96
RPS28BP0C0X0 MDJ1YFL016C 1536 nt9.06□□□□□ -0.96
RPS28BP0C0X0 MOT3YMR070W 1473 nt8.94□□□□□ -0.98
RPS28BP0C0X0 SPT5YML010W 3192 nt8.93□□□□□ -0.98
RPS28BP0C0X0 FRE6YLL051C 2139 nt8.78□□□□□ -1
RPS28BP0C0X0 MCH5YOR306C 1566 nt8.75□□□□□ -1.01
RPS28BP0C0X0 SSN3YPL042C 1668 nt8.75□□□□□ -1.01
RPS28BP0C0X0 NSR1YGR159C 1245 nt8.74□□□□□ -1.01
RPS28BP0C0X0 BOR1YNL275W 1731 nt8.67□□□□□ -1.02
RPS28BP0C0X0 BSC6YOL137W 1494 nt8.57□□□□□ -1.04
RPS28BP0C0X0 PUT4YOR348C 1884 nt8.51□□□□□ -1.05
RPS28BP0C0X0 GID7YCL039W 2238 nt8.5□□□□□ -1.05
RPS28BP0C0X0 BSP1YPR171W 1731 nt8.48□□□□□ -1.05
RPS28BP0C0X0 UBX6YJL048C 1191 nt8.41□□□□□ -1.06
RPS28BP0C0X0 MET2YNL277W 1461 nt8.38□□□□□ -1.07
RPS28BP0C0X0 GUT2YIL155C 1950 nt8.36□□□□□ -1.07
RPS28BP0C0X0 ALG12YNR030W 1656 nt8.3□□□□□ -1.08
RPS28BP0C0X0 YJL027CYJL027C 417 nt8.28□□□□□ -1.08
RPS28BP0C0X0 ESBP6YNL125C 2022 nt8.27□□□□□ -1.09
RPS28BP0C0X0 NPP1YCR026C 2229 nt8.24□□□□□ -1.09
RPS28BP0C0X0 YAT1YAR035W 2064 nt8.24□□□□□ -1.09
RPS28BP0C0X0 SFP1YLR403W 2052 nt8.2□□□□□ -1.1
RPS28BP0C0X0 DED1YOR204W 1815 nt8.2□□□□□ -1.1
RPS28BP0C0X0 HEL2YDR266C 1920 nt8.2□□□□□ -1.1
RPS28BP0C0X0 YBR190WYBR190W 312 nt8.18□□□□□ -1.1
RPS28BP0C0X0 ILV2YMR108W 2064 nt8.16□□□□□ -1.1
RPS28BP0C0X0 POA1YBR022W 534 nt8.16□□□□□ -1.1
RPS28BP0C0X0 PCH2YBR186W 1695 nt8.15□□□□□ -1.1
RPS28BP0C0X0 DTR1YBR180W 1719 nt8.14□□□□□ -1.11
RPS28BP0C0X0 LCB1YMR296C 1677 nt8.14□□□□□ -1.11
RPS28BP0C0X0 HSL7YBR133C 2484 nt8.07□□□□□ -1.12
RPS28BP0C0X0 CMP2YML057W 1815 nt8.06□□□□□ -1.12
RPS28BP0C0X0 HEM14YER014W 1620 nt8.03□□□□□ -1.12
RPS28BP0C0X0 YJL225CYJL225C 5277 nt8.02□□□□□ -1.13
RPS28BP0C0X0 NAR1YNL240C 1476 nt8□□□□□ -1.13
RPS28BP0C0X0 SEC11YIR022W 504 nt7.97□□□□□ -1.13
RPS28BP0C0X0 GAL2YLR081W 1725 nt7.96□□□□□ -1.14
RPS28BP0C0X0 YBR220CYBR220C 1683 nt7.95□□□□□ -1.14
RPS28BP0C0X0 RTC3YHR087W 336 nt7.95□□□□□ -1.14
RPS28BP0C0X0 RFC1YOR217W 2586 nt7.92□□□□□ -1.14
RPS28BP0C0X0 MEP2YNL142W 1500 nt7.91□□□□□ -1.14
RPS28BP0C0X0 RDN25-1RDN25-1 3396 nt7.9□□□□□ -1.14
RPS28BP0C0X0 RDN25-2RDN25-2 3396 nt7.9□□□□□ -1.14
RPS28BP0C0X0 PIB2YGL023C 1908 nt7.9□□□□□ -1.15
RPS28BP0C0X0 ARE1YCR048W 1833 nt7.89□□□□□ -1.15
RPS28BP0C0X0 DBP2YNL112W 1641 nt7.89□□□□□ -1.15
RPS28BP0C0X0 GTB1YDR221W 2109 nt7.88□□□□□ -1.15
RPS28BP0C0X0 SPT8YLR055C 1809 nt7.87□□□□□ -1.15
RPS28BP0C0X0 RSC4YKR008W 1878 nt7.86□□□□□ -1.15
RPS28BP0C0X0 URA8YJR103W 1737 nt7.85□□□□□ -1.15
RPS28BP0C0X0 YGR021WYGR021W 873 nt7.84□□□□□ -1.15
RPS28BP0C0X0 HMG2YLR450W 3138 nt7.84□□□□□ -1.15
RPS28BP0C0X0 TPO4YOR273C 1980 nt7.84□□□□□ -1.15
RPS28BP0C0X0 HSP60YLR259C 1719 nt7.83□□□□□ -1.16
RPS28BP0C0X0 YHR049C-AYHR049C-A 297 nt7.81□□□□□ -1.16
RPS28BP0C0X0 UGA4YDL210W 1716 nt7.81□□□□□ -1.16
RPS28BP0C0X0 YHL050CYHL050C 2094 nt7.79□□□□□ -1.16
RPS28BP0C0X0 TOK1YJL093C 2076 nt7.79□□□□□ -1.16
RPS28BP0C0X0 URN1YPR152C 1398 nt7.79□□□□□ -1.16
RPS28BP0C0X0 BUD23YCR047C 828 nt7.78□□□□□ -1.16
RPS28BP0C0X0 YMR090WYMR090W 684 nt7.77□□□□□ -1.17
RPS28BP0C0X0 MAE1YKL029C 2010 nt7.76□□□□□ -1.17
RPS28BP0C0X0 YLR281CYLR281C 468 nt7.75□□□□□ -1.17
RPS28BP0C0X0 RTF1YGL244W 1677 nt7.75□□□□□ -1.17
RPS28BP0C0X0 YKL036CYKL036C 393 nt7.73□□□□□ -1.17
RPS28BP0C0X0 SCJ1YMR214W 1134 nt7.73□□□□□ -1.17
RPS28BP0C0X0 DCW1YKL046C 1350 nt7.7□□□□□ -1.18
RPS28BP0C0X0 MCM5YLR274W 2328 nt7.69□□□□□ -1.18
RPS28BP0C0X0 THI72YOR192C 1800 nt7.69□□□□□ -1.18
RPS28BP0C0X0 DSK2YMR276W 1122 nt7.69□□□□□ -1.18
RPS28BP0C0X0 MAS1YLR163C 1389 nt7.66□□□□□ -1.18
RPS28BP0C0X0 NRT1YOR071C 1797 nt7.65□□□□□ -1.18
RPS28BP0C0X0 FRA1YLL029W 2250 nt7.64□□□□□ -1.19
RPS28BP0C0X0 PTK1YKL198C 1989 nt7.62□□□□□ -1.19
RPS28BP0C0X0 RIM8YGL045W 1629 nt7.62□□□□□ -1.19
RPS28BP0C0X0 SDH1YKL148C 1923 nt7.6□□□□□ -1.19
RPS28BP0C0X0 EMI2YDR516C 1503 nt7.58□□□□□ -1.2
RPS28BP0C0X0 CYT2YKL087C 675 nt7.58□□□□□ -1.2
RPS28BP0C0X0 BOP3YNL042W 1191 nt7.55□□□□□ -1.2
RPS28BP0C0X0 NSG2YNL156C 900 nt7.55□□□□□ -1.2
RPS28BP0C0X0 GLK1YCL040W 1503 nt7.55□□□□□ -1.2
RPS28BP0C0X0 ACO2YJL200C 2370 nt7.51□□□□□ -1.21
RPS28BP0C0X0 YDR510C-AYDR510C-A 117 nt7.51□□□□□ -1.21
RPS28BP0C0X0 PBP1YGR178C 2169 nt7.49□□□□□ -1.21
RPS28BP0C0X0 SNG1YGR197C 1644 nt7.48□□□□□ -1.21
RPS28BP0C0X0 YGL114WYGL114W 2178 nt7.46□□□□□ -1.21
RPS28BP0C0X0 YML009W-BYML009W-B 477 nt7.46□□□□□ -1.22
RPS28BP0C0X0 AAC1YMR056C 930 nt7.46□□□□□ -1.22
RPS28BP0C0X0 NDI1YML120C 1542 nt7.46□□□□□ -1.22
RPS28BP0C0X0 YFL054CYFL054C 1941 nt7.43□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms