Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 NSR1YGR159C 1245 nt12.69□□□□□ -0.38
SHH4Q06236 YML009W-BYML009W-B 477 nt12.28□□□□□ -0.44
SHH4Q06236 NOP1YDL014W 984 nt11.76□□□□□ -0.53
SHH4Q06236 MDJ1YFL016C 1536 nt11.75□□□□□ -0.53
SHH4Q06236 SSA3YBL075C 1950 nt11.38□□□□□ -0.59
SHH4Q06236 YJL027CYJL027C 417 nt10.82□□□□□ -0.68
SHH4Q06236 YKL036CYKL036C 393 nt10.32□□□□□ -0.76
SHH4Q06236 SRX1YKL086W 384 nt10.24□□□□□ -0.77
SHH4Q06236 YBR190WYBR190W 312 nt10.19□□□□□ -0.78
SHH4Q06236 DBP2YNL112W 1641 nt10.15□□□□□ -0.78
SHH4Q06236 Q0297Q0297 156 nt10.09□□□□□ -0.79
SHH4Q06236 RTC3YHR087W 336 nt9.93□□□□□ -0.82
SHH4Q06236 PUT4YOR348C 1884 nt9.82□□□□□ -0.84
SHH4Q06236 SSA4YER103W 1929 nt9.76□□□□□ -0.85
SHH4Q06236 SSA1YAL005C 1929 nt9.75□□□□□ -0.85
SHH4Q06236 YCR051WYCR051W 669 nt9.68□□□□□ -0.86
SHH4Q06236 PAC11YDR488C 1602 nt9.67□□□□□ -0.86
SHH4Q06236 Q0182Q0182 405 nt9.63□□□□□ -0.87
SHH4Q06236 TRN1tP(UGG)A 72 nt9.57□□□□□ -0.88
SHH4Q06236 SUF9tP(UGG)F 72 nt9.57□□□□□ -0.88
SHH4Q06236 SUF8tP(UGG)H 72 nt9.57□□□□□ -0.88
SHH4Q06236 tP(UGG)LtP(UGG)L 72 nt9.57□□□□□ -0.88
SHH4Q06236 SUF7tP(UGG)M 72 nt9.57□□□□□ -0.88
SHH4Q06236 tP(UGG)N1tP(UGG)N1 72 nt9.57□□□□□ -0.88
SHH4Q06236 tP(UGG)N2tP(UGG)N2 72 nt9.57□□□□□ -0.88
SHH4Q06236 tP(UGG)O1tP(UGG)O1 72 nt9.57□□□□□ -0.88
SHH4Q06236 SUF11tP(UGG)O2 72 nt9.57□□□□□ -0.88
SHH4Q06236 SPT5YML010W 3192 nt9.53□□□□□ -0.88
SHH4Q06236 FPS1YLL043W 2010 nt9.49□□□□□ -0.89
SHH4Q06236 RVS167YDR388W 1449 nt9.48□□□□□ -0.89
SHH4Q06236 POA1YBR022W 534 nt9.48□□□□□ -0.89
SHH4Q06236 CCC1YLR220W 969 nt9.47□□□□□ -0.89
SHH4Q06236 BSC6YOL137W 1494 nt9.44□□□□□ -0.9
SHH4Q06236 BDF1YLR399C 2061 nt9.43□□□□□ -0.9
SHH4Q06236 NVJ2YPR091C 2313 nt9.42□□□□□ -0.9
SHH4Q06236 ARE1YCR048W 1833 nt9.36□□□□□ -0.91
SHH4Q06236 YHR049C-AYHR049C-A 297 nt9.31□□□□□ -0.92
SHH4Q06236 TAT1YBR069C 1860 nt9.3□□□□□ -0.92
SHH4Q06236 SCJ1YMR214W 1134 nt9.27□□□□□ -0.93
SHH4Q06236 SAH1YER043C 1350 nt9.13□□□□□ -0.95
SHH4Q06236 URN1YPR152C 1398 nt9.09□□□□□ -0.95
SHH4Q06236 SCS3YGL126W 1143 nt9.08□□□□□ -0.96
SHH4Q06236 OPI9YLR338W 858 nt9.07□□□□□ -0.96
SHH4Q06236 BUD23YCR047C 828 nt9.06□□□□□ -0.96
SHH4Q06236 RPP1BYDL130W 321 nt9.05□□□□□ -0.96
SHH4Q06236 SHR5YOL110W 714 nt9.01□□□□□ -0.97
SHH4Q06236 MEP2YNL142W 1500 nt8.95□□□□□ -0.98
SHH4Q06236 YOL085CYOL085C 342 nt8.94□□□□□ -0.98
SHH4Q06236 DEP1YAL013W 1218 nt8.91□□□□□ -0.98
SHH4Q06236 tP(UGG)O3tP(UGG)O3 72 nt8.89□□□□□ -0.99
SHH4Q06236 RPN10YHR200W 807 nt8.87□□□□□ -0.99
SHH4Q06236 PKP1YIL042C 1185 nt8.86□□□□□ -0.99
SHH4Q06236 PUN1YLR414C 792 nt8.82□□□□□ -1
SHH4Q06236 PTC2YER089C 1395 nt8.78□□□□□ -1
SHH4Q06236 RPM1RPM1 483 nt8.78□□□□□ -1
SHH4Q06236 YMR090WYMR090W 684 nt8.78□□□□□ -1
SHH4Q06236 YBR220CYBR220C 1683 nt8.77□□□□□ -1.01
SHH4Q06236 NAB2YGL122C 1578 nt8.76□□□□□ -1.01
SHH4Q06236 DCW1YKL046C 1350 nt8.75□□□□□ -1.01
SHH4Q06236 YNL208WYNL208W 600 nt8.75□□□□□ -1.01
SHH4Q06236 PCH2YBR186W 1695 nt8.72□□□□□ -1.01
SHH4Q06236 MOT3YMR070W 1473 nt8.7□□□□□ -1.02
SHH4Q06236 PET122YER153C 765 nt8.69□□□□□ -1.02
SHH4Q06236 GUT2YIL155C 1950 nt8.68□□□□□ -1.02
SHH4Q06236 SEC11YIR022W 504 nt8.67□□□□□ -1.02
SHH4Q06236 UME6YDR207C 2511 nt8.65□□□□□ -1.02
SHH4Q06236 EMI2YDR516C 1503 nt8.65□□□□□ -1.02
SHH4Q06236 YJR018WYJR018W 363 nt8.64□□□□□ -1.03
SHH4Q06236 BOR1YNL275W 1731 nt8.61□□□□□ -1.03
SHH4Q06236 YDJ1YNL064C 1230 nt8.61□□□□□ -1.03
SHH4Q06236 SDH1YKL148C 1923 nt8.56□□□□□ -1.04
SHH4Q06236 FIS1YIL065C 468 nt8.55□□□□□ -1.04
SHH4Q06236 YHR165W-AYHR165W-A 312 nt8.54□□□□□ -1.04
SHH4Q06236 DAL1YIR027C 1383 nt8.53□□□□□ -1.04
SHH4Q06236 YDL221WYDL221W 552 nt8.51□□□□□ -1.05
SHH4Q06236 YPS1YLR120C 1710 nt8.51□□□□□ -1.05
SHH4Q06236 FPR4YLR449W 1179 nt8.5□□□□□ -1.05
SHH4Q06236 GAR1YHR089C 618 nt8.49□□□□□ -1.05
SHH4Q06236 SCR1SCR1 522 nt8.49□□□□□ -1.05
SHH4Q06236 YJL225CYJL225C 5277 nt8.48□□□□□ -1.05
SHH4Q06236 PHO4YFR034C 939 nt8.45□□□□□ -1.06
SHH4Q06236 PIB2YGL023C 1908 nt8.43□□□□□ -1.06
SHH4Q06236 INM2YDR287W 879 nt8.43□□□□□ -1.06
SHH4Q06236 RTF1YGL244W 1677 nt8.42□□□□□ -1.06
SHH4Q06236 RRN5YLR141W 1092 nt8.4□□□□□ -1.06
SHH4Q06236 SCC4YER147C 1875 nt8.39□□□□□ -1.07
SHH4Q06236 MCH5YOR306C 1566 nt8.38□□□□□ -1.07
SHH4Q06236 RPP2BYDR382W 333 nt8.35□□□□□ -1.07
SHH4Q06236 YJR120WYJR120W 351 nt8.35□□□□□ -1.07
SHH4Q06236 YDR095CYDR095C 411 nt8.34□□□□□ -1.07
SHH4Q06236 YSC84YHR016C 1407 nt8.31□□□□□ -1.08
SHH4Q06236 BOP3YNL042W 1191 nt8.31□□□□□ -1.08
SHH4Q06236 CAC2YML102W 1407 nt8.28□□□□□ -1.08
SHH4Q06236 TIR1YER011W 765 nt8.23□□□□□ -1.09
SHH4Q06236 YBL100CYBL100C 315 nt8.23□□□□□ -1.09
SHH4Q06236 PTK1YKL198C 1989 nt8.22□□□□□ -1.09
SHH4Q06236 ALG12YNR030W 1656 nt8.22□□□□□ -1.09
SHH4Q06236 YER088W-BYER088W-B 147 nt8.22□□□□□ -1.09
SHH4Q06236 PTP1YDL230W 1008 nt8.19□□□□□ -1.1
SHH4Q06236 FRE6YLL051C 2139 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms