Protein–RNA interactions for Protein: P16370

RPB3, DNA-directed RNA polymerase II subunit RPB3, yeastyeast

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB3P16370 NSR1YGR159C 1245 nt15.83■□□□□ 0.12
RPB3P16370 YML009W-BYML009W-B 477 nt15.6■□□□□ 0.09
RPB3P16370 NOP1YDL014W 984 nt15.1■□□□□ 0.01
RPB3P16370 MDJ1YFL016C 1536 nt14.71□□□□□ -0.05
RPB3P16370 YKL036CYKL036C 393 nt13.62□□□□□ -0.23
RPB3P16370 YJL027CYJL027C 417 nt13.52□□□□□ -0.25
RPB3P16370 SSA3YBL075C 1950 nt13.43□□□□□ -0.26
RPB3P16370 SRX1YKL086W 384 nt13.17□□□□□ -0.3
RPB3P16370 Q0297Q0297 156 nt13.1□□□□□ -0.31
RPB3P16370 YBR190WYBR190W 312 nt12.76□□□□□ -0.37
RPB3P16370 DBP2YNL112W 1641 nt12.75□□□□□ -0.37
RPB3P16370 YCR051WYCR051W 669 nt12.43□□□□□ -0.42
RPB3P16370 RTC3YHR087W 336 nt12.41□□□□□ -0.42
RPB3P16370 PUT4YOR348C 1884 nt12.24□□□□□ -0.45
RPB3P16370 SCS3YGL126W 1143 nt12.21□□□□□ -0.45
RPB3P16370 TRN1tP(UGG)A 72 nt12.08□□□□□ -0.48
RPB3P16370 SUF9tP(UGG)F 72 nt12.08□□□□□ -0.48
RPB3P16370 SUF8tP(UGG)H 72 nt12.08□□□□□ -0.48
RPB3P16370 tP(UGG)LtP(UGG)L 72 nt12.08□□□□□ -0.48
RPB3P16370 SUF7tP(UGG)M 72 nt12.08□□□□□ -0.48
RPB3P16370 tP(UGG)N1tP(UGG)N1 72 nt12.08□□□□□ -0.48
RPB3P16370 tP(UGG)N2tP(UGG)N2 72 nt12.08□□□□□ -0.48
RPB3P16370 tP(UGG)O1tP(UGG)O1 72 nt12.08□□□□□ -0.48
RPB3P16370 SUF11tP(UGG)O2 72 nt12.08□□□□□ -0.48
RPB3P16370 CCC1YLR220W 969 nt11.9□□□□□ -0.5
RPB3P16370 RVS167YDR388W 1449 nt11.86□□□□□ -0.51
RPB3P16370 SPT5YML010W 3192 nt11.83□□□□□ -0.52
RPB3P16370 YOL085CYOL085C 342 nt11.78□□□□□ -0.52
RPB3P16370 ARE1YCR048W 1833 nt11.76□□□□□ -0.53
RPB3P16370 POA1YBR022W 534 nt11.75□□□□□ -0.53
RPB3P16370 SSA4YER103W 1929 nt11.75□□□□□ -0.53
RPB3P16370 RPP1BYDL130W 321 nt11.74□□□□□ -0.53
RPB3P16370 BSC6YOL137W 1494 nt11.66□□□□□ -0.54
RPB3P16370 PKP1YIL042C 1185 nt11.59□□□□□ -0.55
RPB3P16370 YHR049C-AYHR049C-A 297 nt11.58□□□□□ -0.56
RPB3P16370 SCJ1YMR214W 1134 nt11.56□□□□□ -0.56
RPB3P16370 SAH1YER043C 1350 nt11.47□□□□□ -0.57
RPB3P16370 BDF1YLR399C 2061 nt11.42□□□□□ -0.58
RPB3P16370 OPI9YLR338W 858 nt11.35□□□□□ -0.59
RPB3P16370 URN1YPR152C 1398 nt11.35□□□□□ -0.59
RPB3P16370 tP(UGG)O3tP(UGG)O3 72 nt11.31□□□□□ -0.6
RPB3P16370 SHR5YOL110W 714 nt11.25□□□□□ -0.61
RPB3P16370 TAT1YBR069C 1860 nt11.24□□□□□ -0.61
RPB3P16370 PET122YER153C 765 nt11.23□□□□□ -0.61
RPB3P16370 BUD23YCR047C 828 nt11.21□□□□□ -0.61
RPB3P16370 PAC11YDR488C 1602 nt11.18□□□□□ -0.62
RPB3P16370 RPN10YHR200W 807 nt11.09□□□□□ -0.63
RPB3P16370 DEP1YAL013W 1218 nt11.09□□□□□ -0.63
RPB3P16370 SCR1SCR1 522 nt11.07□□□□□ -0.64
RPB3P16370 MEP2YNL142W 1500 nt11.04□□□□□ -0.64
RPB3P16370 PUN1YLR414C 792 nt11.04□□□□□ -0.64
RPB3P16370 PTC2YER089C 1395 nt11□□□□□ -0.65
RPB3P16370 YDJ1YNL064C 1230 nt10.98□□□□□ -0.65
RPB3P16370 NAB2YGL122C 1578 nt10.97□□□□□ -0.65
RPB3P16370 NVJ2YPR091C 2313 nt10.95□□□□□ -0.66
RPB3P16370 YNL208WYNL208W 600 nt10.92□□□□□ -0.66
RPB3P16370 RRN5YLR141W 1092 nt10.86□□□□□ -0.67
RPB3P16370 DCW1YKL046C 1350 nt10.85□□□□□ -0.67
RPB3P16370 ATS1YAL020C 1002 nt10.84□□□□□ -0.67
RPB3P16370 YJR018WYJR018W 363 nt10.79□□□□□ -0.68
RPB3P16370 YBR220CYBR220C 1683 nt10.79□□□□□ -0.68
RPB3P16370 FIS1YIL065C 468 nt10.77□□□□□ -0.69
RPB3P16370 GAR1YHR089C 618 nt10.73□□□□□ -0.69
RPB3P16370 DAL1YIR027C 1383 nt10.68□□□□□ -0.7
RPB3P16370 YPS1YLR120C 1710 nt10.67□□□□□ -0.7
RPB3P16370 EMI2YDR516C 1503 nt10.67□□□□□ -0.7
RPB3P16370 YER088W-BYER088W-B 147 nt10.66□□□□□ -0.7
RPB3P16370 YMR090WYMR090W 684 nt10.63□□□□□ -0.71
RPB3P16370 FPR4YLR449W 1179 nt10.61□□□□□ -0.71
RPB3P16370 PHO4YFR034C 939 nt10.59□□□□□ -0.71
RPB3P16370 PCH2YBR186W 1695 nt10.58□□□□□ -0.72
RPB3P16370 GUT2YIL155C 1950 nt10.57□□□□□ -0.72
RPB3P16370 SDH1YKL148C 1923 nt10.56□□□□□ -0.72
RPB3P16370 YHR165W-AYHR165W-A 312 nt10.56□□□□□ -0.72
RPB3P16370 RSB1YOR049C 1065 nt10.56□□□□□ -0.72
RPB3P16370 YDL221WYDL221W 552 nt10.53□□□□□ -0.72
RPB3P16370 INM2YDR287W 879 nt10.53□□□□□ -0.72
RPB3P16370 YJR120WYJR120W 351 nt10.49□□□□□ -0.73
RPB3P16370 YDR095CYDR095C 411 nt10.48□□□□□ -0.73
RPB3P16370 SEC11YIR022W 504 nt10.48□□□□□ -0.73
RPB3P16370 YJL225CYJL225C 5277 nt10.47□□□□□ -0.73
RPB3P16370 PIB2YGL023C 1908 nt10.43□□□□□ -0.74
RPB3P16370 RPP2BYDR382W 333 nt10.43□□□□□ -0.74
RPB3P16370 CAC2YML102W 1407 nt10.41□□□□□ -0.74
RPB3P16370 TIR1YER011W 765 nt10.4□□□□□ -0.74
RPB3P16370 FPS1YLL043W 2010 nt10.38□□□□□ -0.75
RPB3P16370 SCC4YER147C 1875 nt10.36□□□□□ -0.75
RPB3P16370 PTP1YDL230W 1008 nt10.36□□□□□ -0.75
RPB3P16370 SSA1YAL005C 1929 nt10.32□□□□□ -0.76
RPB3P16370 YBL100CYBL100C 315 nt10.29□□□□□ -0.76
RPB3P16370 IRC15YPL017C 1500 nt10.27□□□□□ -0.77
RPB3P16370 RPP2AYOL039W 321 nt10.26□□□□□ -0.77
RPB3P16370 RTF1YGL244W 1677 nt10.23□□□□□ -0.77
RPB3P16370 YSC84YHR016C 1407 nt10.23□□□□□ -0.77
RPB3P16370 GIS3YLR094C 1509 nt10.21□□□□□ -0.78
RPB3P16370 UME6YDR207C 2511 nt10.2□□□□□ -0.78
RPB3P16370 YHL050CYHL050C 2094 nt10.18□□□□□ -0.78
RPB3P16370 ALF1YNL148C 765 nt10.17□□□□□ -0.78
RPB3P16370 PTK1YKL198C 1989 nt10.13□□□□□ -0.79
RPB3P16370 FUN26YAL022C 1554 nt10.13□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms