Protein–RNA interactions for Protein: P07258

CPA1, Carbamoyl-phosphate synthase arginine-specific small chain, yeastyeast

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CPA1P07258 YML009W-BYML009W-B 477 nt20.28■□□□□ 0.84
CPA1P07258 NSR1YGR159C 1245 nt20.11■□□□□ 0.81
CPA1P07258 NOP1YDL014W 984 nt19.81■□□□□ 0.76
CPA1P07258 YKL036CYKL036C 393 nt18.32■□□□□ 0.52
CPA1P07258 MDJ1YFL016C 1536 nt17.71■□□□□ 0.43
CPA1P07258 Q0297Q0297 156 nt17.33■□□□□ 0.36
CPA1P07258 SRX1YKL086W 384 nt17.27■□□□□ 0.36
CPA1P07258 YJL027CYJL027C 417 nt17.12■□□□□ 0.33
CPA1P07258 SCS3YGL126W 1143 nt16.67■□□□□ 0.26
CPA1P07258 YCR051WYCR051W 669 nt16.38■□□□□ 0.21
CPA1P07258 YOL085CYOL085C 342 nt15.84■□□□□ 0.13
CPA1P07258 DBP2YNL112W 1641 nt15.69■□□□□ 0.1
CPA1P07258 PKP1YIL042C 1185 nt15.56■□□□□ 0.08
CPA1P07258 RPP1BYDL130W 321 nt15.55■□□□□ 0.08
CPA1P07258 TRN1tP(UGG)A 72 nt15.55■□□□□ 0.08
CPA1P07258 SUF9tP(UGG)F 72 nt15.55■□□□□ 0.08
CPA1P07258 SUF8tP(UGG)H 72 nt15.55■□□□□ 0.08
CPA1P07258 tP(UGG)LtP(UGG)L 72 nt15.55■□□□□ 0.08
CPA1P07258 SUF7tP(UGG)M 72 nt15.55■□□□□ 0.08
CPA1P07258 tP(UGG)N1tP(UGG)N1 72 nt15.55■□□□□ 0.08
CPA1P07258 tP(UGG)N2tP(UGG)N2 72 nt15.55■□□□□ 0.08
CPA1P07258 tP(UGG)O1tP(UGG)O1 72 nt15.55■□□□□ 0.08
CPA1P07258 SUF11tP(UGG)O2 72 nt15.55■□□□□ 0.08
CPA1P07258 CCC1YLR220W 969 nt15.38■□□□□ 0.05
CPA1P07258 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
CPA1P07258 ATS1YAL020C 1002 nt14.95□□□□□ -0.02
CPA1P07258 SCJ1YMR214W 1134 nt14.94□□□□□ -0.02
CPA1P07258 RVS167YDR388W 1449 nt14.88□□□□□ -0.03
CPA1P07258 PET122YER153C 765 nt14.81□□□□□ -0.04
CPA1P07258 RTC3YHR087W 336 nt14.8□□□□□ -0.04
CPA1P07258 SCR1SCR1 522 nt14.75□□□□□ -0.05
CPA1P07258 tP(UGG)O3tP(UGG)O3 72 nt14.74□□□□□ -0.05
CPA1P07258 RRN5YLR141W 1092 nt14.4□□□□□ -0.1
CPA1P07258 SHR5YOL110W 714 nt14.35□□□□□ -0.11
CPA1P07258 YDJ1YNL064C 1230 nt14.28□□□□□ -0.12
CPA1P07258 RSB1YOR049C 1065 nt14.14□□□□□ -0.15
CPA1P07258 YER088W-BYER088W-B 147 nt14.12□□□□□ -0.15
CPA1P07258 GAR1YHR089C 618 nt13.92□□□□□ -0.18
CPA1P07258 URN1YPR152C 1398 nt13.87□□□□□ -0.19
CPA1P07258 DEP1YAL013W 1218 nt13.86□□□□□ -0.19
CPA1P07258 PST2YDR032C 597 nt13.83□□□□□ -0.2
CPA1P07258 RPN10YHR200W 807 nt13.75□□□□□ -0.21
CPA1P07258 YNL208WYNL208W 600 nt13.71□□□□□ -0.21
CPA1P07258 OPI9YLR338W 858 nt13.66□□□□□ -0.22
CPA1P07258 PUT4YOR348C 1884 nt13.63□□□□□ -0.23
CPA1P07258 SAH1YER043C 1350 nt13.52□□□□□ -0.25
CPA1P07258 TIR1YER011W 765 nt13.46□□□□□ -0.25
CPA1P07258 ARE1YCR048W 1833 nt13.41□□□□□ -0.26
CPA1P07258 YKL097CYKL097C 411 nt13.35□□□□□ -0.27
CPA1P07258 PUN1YLR414C 792 nt13.3□□□□□ -0.28
CPA1P07258 YHR049C-AYHR049C-A 297 nt13.25□□□□□ -0.29
CPA1P07258 YJR018WYJR018W 363 nt13.25□□□□□ -0.29
CPA1P07258 SSA1YAL005C 1929 nt13.25□□□□□ -0.29
CPA1P07258 SHU1YHL006C 453 nt13.22□□□□□ -0.29
CPA1P07258 POA1YBR022W 534 nt13.22□□□□□ -0.29
CPA1P07258 PTC2YER089C 1395 nt13.08□□□□□ -0.31
CPA1P07258 RPP2BYDR382W 333 nt13.05□□□□□ -0.32
CPA1P07258 YJR120WYJR120W 351 nt12.99□□□□□ -0.33
CPA1P07258 SRB2YHR041C 633 nt12.98□□□□□ -0.33
CPA1P07258 YAL037C-BYAL037C-B 975 nt12.97□□□□□ -0.33
CPA1P07258 BUD23YCR047C 828 nt12.96□□□□□ -0.33
CPA1P07258 NAB2YGL122C 1578 nt12.93□□□□□ -0.34
CPA1P07258 BSC6YOL137W 1494 nt12.91□□□□□ -0.34
CPA1P07258 YGR021WYGR021W 873 nt12.88□□□□□ -0.35
CPA1P07258 WWM1YFL010C 636 nt12.85□□□□□ -0.35
CPA1P07258 INM2YDR287W 879 nt12.8□□□□□ -0.36
CPA1P07258 HOM6YJR139C 1080 nt12.79□□□□□ -0.36
CPA1P07258 BDH2YAL061W 1254 nt12.77□□□□□ -0.37
CPA1P07258 DAL1YIR027C 1383 nt12.77□□□□□ -0.37
CPA1P07258 YOR139CYOR139C 393 nt12.75□□□□□ -0.37
CPA1P07258 FPR4YLR449W 1179 nt12.72□□□□□ -0.37
CPA1P07258 YFL021C-AYFL021C-A 855 nt12.7□□□□□ -0.38
CPA1P07258 MNP1YGL068W 585 nt12.7□□□□□ -0.38
CPA1P07258 FIS1YIL065C 468 nt12.7□□□□□ -0.38
CPA1P07258 NPL3YDR432W 1245 nt12.69□□□□□ -0.38
CPA1P07258 YBL100CYBL100C 315 nt12.66□□□□□ -0.38
CPA1P07258 LSM3YLR438C-A 270 nt12.65□□□□□ -0.38
CPA1P07258 SSA3YBL075C 1950 nt12.63□□□□□ -0.39
CPA1P07258 PHO4YFR034C 939 nt12.63□□□□□ -0.39
CPA1P07258 RKM5YLR137W 1104 nt12.6□□□□□ -0.39
CPA1P07258 YOL037CYOL037C 354 nt12.6□□□□□ -0.39
CPA1P07258 TRM9YML014W 840 nt12.53□□□□□ -0.4
CPA1P07258 FUN26YAL022C 1554 nt12.51□□□□□ -0.41
CPA1P07258 CCT6YDR188W 1641 nt12.38□□□□□ -0.43
CPA1P07258 ALF1YNL148C 765 nt12.35□□□□□ -0.43
CPA1P07258 YPS1YLR120C 1710 nt12.34□□□□□ -0.43
CPA1P07258 SUF2tP(AGG)C 72 nt12.32□□□□□ -0.44
CPA1P07258 SUF10tP(AGG)N 72 nt12.32□□□□□ -0.44
CPA1P07258 YDR095CYDR095C 411 nt12.29□□□□□ -0.44
CPA1P07258 YLR281CYLR281C 468 nt12.27□□□□□ -0.45
CPA1P07258 tM(CAU)CtM(CAU)C 72 nt12.26□□□□□ -0.45
CPA1P07258 IMT4tM(CAU)E 72 nt12.26□□□□□ -0.45
CPA1P07258 IMT3tM(CAU)J3 72 nt12.26□□□□□ -0.45
CPA1P07258 IMT1tM(CAU)O1 72 nt12.26□□□□□ -0.45
CPA1P07258 IMT2tM(CAU)P 72 nt12.26□□□□□ -0.45
CPA1P07258 YHR165W-AYHR165W-A 312 nt12.22□□□□□ -0.45
CPA1P07258 WHI5YOR083W 888 nt12.21□□□□□ -0.45
CPA1P07258 SPT5YML010W 3192 nt12.19□□□□□ -0.46
CPA1P07258 PUS2YGL063W 1113 nt12.17□□□□□ -0.46
CPA1P07258 YLR154C-GYLR154C-G 150 nt12.13□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms