Protein–RNA interactions for Protein: P29340

PEX4, Ubiquitin-conjugating enzyme E2-21 kDa, yeastyeast

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX4P29340 NSR1YGR159C 1245 nt17.33■□□□□ 0.36
PEX4P29340 YML009W-BYML009W-B 477 nt17.31■□□□□ 0.36
PEX4P29340 NOP1YDL014W 984 nt16.7■□□□□ 0.26
PEX4P29340 MDJ1YFL016C 1536 nt15.66■□□□□ 0.1
PEX4P29340 YKL036CYKL036C 393 nt15.19■□□□□ 0.02
PEX4P29340 SRX1YKL086W 384 nt14.57□□□□□ -0.08
PEX4P29340 Q0297Q0297 156 nt14.51□□□□□ -0.09
PEX4P29340 YJL027CYJL027C 417 nt14.43□□□□□ -0.1
PEX4P29340 YCR051WYCR051W 669 nt13.86□□□□□ -0.19
PEX4P29340 SCS3YGL126W 1143 nt13.71□□□□□ -0.21
PEX4P29340 DBP2YNL112W 1641 nt13.71□□□□□ -0.22
PEX4P29340 YBR190WYBR190W 312 nt13.38□□□□□ -0.27
PEX4P29340 TRN1tP(UGG)A 72 nt13.32□□□□□ -0.28
PEX4P29340 SUF9tP(UGG)F 72 nt13.32□□□□□ -0.28
PEX4P29340 SUF8tP(UGG)H 72 nt13.32□□□□□ -0.28
PEX4P29340 tP(UGG)LtP(UGG)L 72 nt13.32□□□□□ -0.28
PEX4P29340 SUF7tP(UGG)M 72 nt13.32□□□□□ -0.28
PEX4P29340 tP(UGG)N1tP(UGG)N1 72 nt13.32□□□□□ -0.28
PEX4P29340 tP(UGG)N2tP(UGG)N2 72 nt13.32□□□□□ -0.28
PEX4P29340 tP(UGG)O1tP(UGG)O1 72 nt13.32□□□□□ -0.28
PEX4P29340 SUF11tP(UGG)O2 72 nt13.32□□□□□ -0.28
PEX4P29340 CCC1YLR220W 969 nt13.23□□□□□ -0.29
PEX4P29340 YOL085CYOL085C 342 nt13.15□□□□□ -0.3
PEX4P29340 RTC3YHR087W 336 nt13.12□□□□□ -0.31
PEX4P29340 SSA3YBL075C 1950 nt13.04□□□□□ -0.32
PEX4P29340 RPP1BYDL130W 321 nt13.04□□□□□ -0.32
PEX4P29340 PKP1YIL042C 1185 nt13.02□□□□□ -0.33
PEX4P29340 RVS167YDR388W 1449 nt12.89□□□□□ -0.35
PEX4P29340 SCJ1YMR214W 1134 nt12.77□□□□□ -0.37
PEX4P29340 tP(UGG)O3tP(UGG)O3 72 nt12.52□□□□□ -0.41
PEX4P29340 PET122YER153C 765 nt12.5□□□□□ -0.41
PEX4P29340 SHR5YOL110W 714 nt12.37□□□□□ -0.43
PEX4P29340 SCR1SCR1 522 nt12.31□□□□□ -0.44
PEX4P29340 PUT4YOR348C 1884 nt12.31□□□□□ -0.44
PEX4P29340 URN1YPR152C 1398 nt12.18□□□□□ -0.46
PEX4P29340 ATS1YAL020C 1002 nt12.18□□□□□ -0.46
PEX4P29340 DEP1YAL013W 1218 nt12.13□□□□□ -0.47
PEX4P29340 RRN5YLR141W 1092 nt12.1□□□□□ -0.47
PEX4P29340 YDJ1YNL064C 1230 nt12.1□□□□□ -0.47
PEX4P29340 OPI9YLR338W 858 nt12.03□□□□□ -0.48
PEX4P29340 SAH1YER043C 1350 nt12.03□□□□□ -0.48
PEX4P29340 ARE1YCR048W 1833 nt12.02□□□□□ -0.48
PEX4P29340 RPN10YHR200W 807 nt11.96□□□□□ -0.49
PEX4P29340 POA1YBR022W 534 nt11.94□□□□□ -0.5
PEX4P29340 YHR049C-AYHR049C-A 297 nt11.92□□□□□ -0.5
PEX4P29340 GAR1YHR089C 618 nt11.91□□□□□ -0.5
PEX4P29340 YNL208WYNL208W 600 nt11.88□□□□□ -0.51
PEX4P29340 YER088W-BYER088W-B 147 nt11.86□□□□□ -0.51
PEX4P29340 RSB1YOR049C 1065 nt11.83□□□□□ -0.52
PEX4P29340 BSC6YOL137W 1494 nt11.72□□□□□ -0.53
PEX4P29340 PUN1YLR414C 792 nt11.68□□□□□ -0.54
PEX4P29340 BUD23YCR047C 828 nt11.64□□□□□ -0.55
PEX4P29340 PTC2YER089C 1395 nt11.59□□□□□ -0.55
PEX4P29340 YJR018WYJR018W 363 nt11.59□□□□□ -0.55
PEX4P29340 TIR1YER011W 765 nt11.51□□□□□ -0.57
PEX4P29340 NAB2YGL122C 1578 nt11.45□□□□□ -0.58
PEX4P29340 SSA1YAL005C 1929 nt11.41□□□□□ -0.58
PEX4P29340 YJR120WYJR120W 351 nt11.34□□□□□ -0.59
PEX4P29340 RPP2BYDR382W 333 nt11.32□□□□□ -0.6
PEX4P29340 PST2YDR032C 597 nt11.3□□□□□ -0.6
PEX4P29340 FPR4YLR449W 1179 nt11.29□□□□□ -0.6
PEX4P29340 FIS1YIL065C 468 nt11.28□□□□□ -0.6
PEX4P29340 DAL1YIR027C 1383 nt11.27□□□□□ -0.61
PEX4P29340 SPT5YML010W 3192 nt11.23□□□□□ -0.61
PEX4P29340 INM2YDR287W 879 nt11.19□□□□□ -0.62
PEX4P29340 PHO4YFR034C 939 nt11.18□□□□□ -0.62
PEX4P29340 SRB2YHR041C 633 nt11.17□□□□□ -0.62
PEX4P29340 PAC11YDR488C 1602 nt11.1□□□□□ -0.63
PEX4P29340 YBL100CYBL100C 315 nt11.08□□□□□ -0.64
PEX4P29340 BDH2YAL061W 1254 nt11.03□□□□□ -0.64
PEX4P29340 SSA4YER103W 1929 nt11.02□□□□□ -0.65
PEX4P29340 YPS1YLR120C 1710 nt11.01□□□□□ -0.65
PEX4P29340 MEP2YNL142W 1500 nt11□□□□□ -0.65
PEX4P29340 NVJ2YPR091C 2313 nt10.99□□□□□ -0.65
PEX4P29340 WWM1YFL010C 636 nt10.97□□□□□ -0.65
PEX4P29340 YHR165W-AYHR165W-A 312 nt10.95□□□□□ -0.66
PEX4P29340 FUN26YAL022C 1554 nt10.93□□□□□ -0.66
PEX4P29340 SHU1YHL006C 453 nt10.92□□□□□ -0.66
PEX4P29340 YDR095CYDR095C 411 nt10.91□□□□□ -0.66
PEX4P29340 TRM9YML014W 840 nt10.86□□□□□ -0.67
PEX4P29340 YAL037C-BYAL037C-B 975 nt10.85□□□□□ -0.67
PEX4P29340 ALF1YNL148C 765 nt10.85□□□□□ -0.67
PEX4P29340 YGR021WYGR021W 873 nt10.84□□□□□ -0.67
PEX4P29340 DCW1YKL046C 1350 nt10.84□□□□□ -0.67
PEX4P29340 LSM3YLR438C-A 270 nt10.82□□□□□ -0.68
PEX4P29340 FPS1YLL043W 2010 nt10.8□□□□□ -0.68
PEX4P29340 YFL021C-AYFL021C-A 855 nt10.78□□□□□ -0.68
PEX4P29340 YKL097CYKL097C 411 nt10.78□□□□□ -0.68
PEX4P29340 HOM6YJR139C 1080 nt10.76□□□□□ -0.69
PEX4P29340 CCT6YDR188W 1641 nt10.76□□□□□ -0.69
PEX4P29340 BDF1YLR399C 2061 nt10.74□□□□□ -0.69
PEX4P29340 MNP1YGL068W 585 nt10.73□□□□□ -0.69
PEX4P29340 RPP2AYOL039W 321 nt10.71□□□□□ -0.69
PEX4P29340 EMI2YDR516C 1503 nt10.7□□□□□ -0.7
PEX4P29340 SUF2tP(AGG)C 72 nt10.7□□□□□ -0.7
PEX4P29340 SUF10tP(AGG)N 72 nt10.7□□□□□ -0.7
PEX4P29340 PTP1YDL230W 1008 nt10.66□□□□□ -0.7
PEX4P29340 YMR090WYMR090W 684 nt10.65□□□□□ -0.7
PEX4P29340 SIS1YNL007C 1059 nt10.63□□□□□ -0.71
PEX4P29340 CAC2YML102W 1407 nt10.63□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms