Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 NSR1YGR159C 1245 nt16.31■□□□□ 0.2
SMD3P43321 YML009W-BYML009W-B 477 nt15.93■□□□□ 0.14
SMD3P43321 NOP1YDL014W 984 nt15.32■□□□□ 0.04
SMD3P43321 MDJ1YFL016C 1536 nt14.95□□□□□ -0.02
SMD3P43321 YJL027CYJL027C 417 nt13.81□□□□□ -0.2
SMD3P43321 YKL036CYKL036C 393 nt13.58□□□□□ -0.24
SMD3P43321 SRX1YKL086W 384 nt13.33□□□□□ -0.28
SMD3P43321 Q0297Q0297 156 nt13.17□□□□□ -0.3
SMD3P43321 DBP2YNL112W 1641 nt12.97□□□□□ -0.33
SMD3P43321 YBR190WYBR190W 312 nt12.93□□□□□ -0.34
SMD3P43321 SSA3YBL075C 1950 nt12.64□□□□□ -0.39
SMD3P43321 RTC3YHR087W 336 nt12.64□□□□□ -0.39
SMD3P43321 YCR051WYCR051W 669 nt12.62□□□□□ -0.39
SMD3P43321 TRN1tP(UGG)A 72 nt12.35□□□□□ -0.43
SMD3P43321 SUF9tP(UGG)F 72 nt12.35□□□□□ -0.43
SMD3P43321 SUF8tP(UGG)H 72 nt12.35□□□□□ -0.43
SMD3P43321 tP(UGG)LtP(UGG)L 72 nt12.35□□□□□ -0.43
SMD3P43321 SUF7tP(UGG)M 72 nt12.35□□□□□ -0.43
SMD3P43321 tP(UGG)N1tP(UGG)N1 72 nt12.35□□□□□ -0.43
SMD3P43321 tP(UGG)N2tP(UGG)N2 72 nt12.35□□□□□ -0.43
SMD3P43321 tP(UGG)O1tP(UGG)O1 72 nt12.35□□□□□ -0.43
SMD3P43321 SUF11tP(UGG)O2 72 nt12.35□□□□□ -0.43
SMD3P43321 CCC1YLR220W 969 nt12.25□□□□□ -0.45
SMD3P43321 RVS167YDR388W 1449 nt12.2□□□□□ -0.46
SMD3P43321 PUT4YOR348C 1884 nt12.11□□□□□ -0.47
SMD3P43321 SCS3YGL126W 1143 nt12.03□□□□□ -0.48
SMD3P43321 SCJ1YMR214W 1134 nt11.9□□□□□ -0.5
SMD3P43321 RPP1BYDL130W 321 nt11.82□□□□□ -0.52
SMD3P43321 YOL085CYOL085C 342 nt11.74□□□□□ -0.53
SMD3P43321 ARE1YCR048W 1833 nt11.72□□□□□ -0.53
SMD3P43321 POA1YBR022W 534 nt11.71□□□□□ -0.53
SMD3P43321 PKP1YIL042C 1185 nt11.62□□□□□ -0.55
SMD3P43321 YHR049C-AYHR049C-A 297 nt11.61□□□□□ -0.55
SMD3P43321 URN1YPR152C 1398 nt11.6□□□□□ -0.55
SMD3P43321 SHR5YOL110W 714 nt11.6□□□□□ -0.55
SMD3P43321 SAH1YER043C 1350 nt11.59□□□□□ -0.55
SMD3P43321 BSC6YOL137W 1494 nt11.56□□□□□ -0.56
SMD3P43321 OPI9YLR338W 858 nt11.54□□□□□ -0.56
SMD3P43321 tP(UGG)O3tP(UGG)O3 72 nt11.51□□□□□ -0.57
SMD3P43321 DEP1YAL013W 1218 nt11.43□□□□□ -0.58
SMD3P43321 RPN10YHR200W 807 nt11.37□□□□□ -0.59
SMD3P43321 SPT5YML010W 3192 nt11.34□□□□□ -0.59
SMD3P43321 PET122YER153C 765 nt11.33□□□□□ -0.6
SMD3P43321 BUD23YCR047C 828 nt11.32□□□□□ -0.6
SMD3P43321 SSA4YER103W 1929 nt11.27□□□□□ -0.61
SMD3P43321 PUN1YLR414C 792 nt11.24□□□□□ -0.61
SMD3P43321 YNL208WYNL208W 600 nt11.23□□□□□ -0.61
SMD3P43321 PTC2YER089C 1395 nt11.16□□□□□ -0.62
SMD3P43321 YDJ1YNL064C 1230 nt11.16□□□□□ -0.62
SMD3P43321 SCR1SCR1 522 nt11.14□□□□□ -0.63
SMD3P43321 NAB2YGL122C 1578 nt11.11□□□□□ -0.63
SMD3P43321 YJR018WYJR018W 363 nt11.04□□□□□ -0.64
SMD3P43321 GAR1YHR089C 618 nt10.99□□□□□ -0.65
SMD3P43321 RRN5YLR141W 1092 nt10.95□□□□□ -0.66
SMD3P43321 MEP2YNL142W 1500 nt10.91□□□□□ -0.66
SMD3P43321 BDF1YLR399C 2061 nt10.85□□□□□ -0.67
SMD3P43321 FIS1YIL065C 468 nt10.85□□□□□ -0.67
SMD3P43321 DAL1YIR027C 1383 nt10.85□□□□□ -0.67
SMD3P43321 FPR4YLR449W 1179 nt10.84□□□□□ -0.67
SMD3P43321 INM2YDR287W 879 nt10.75□□□□□ -0.69
SMD3P43321 PHO4YFR034C 939 nt10.74□□□□□ -0.69
SMD3P43321 RPP2BYDR382W 333 nt10.73□□□□□ -0.69
SMD3P43321 YER088W-BYER088W-B 147 nt10.73□□□□□ -0.69
SMD3P43321 TAT1YBR069C 1860 nt10.72□□□□□ -0.69
SMD3P43321 YPS1YLR120C 1710 nt10.71□□□□□ -0.69
SMD3P43321 DCW1YKL046C 1350 nt10.69□□□□□ -0.7
SMD3P43321 YHR165W-AYHR165W-A 312 nt10.67□□□□□ -0.7
SMD3P43321 YJR120WYJR120W 351 nt10.66□□□□□ -0.7
SMD3P43321 PAC11YDR488C 1602 nt10.65□□□□□ -0.7
SMD3P43321 TIR1YER011W 765 nt10.64□□□□□ -0.71
SMD3P43321 YMR090WYMR090W 684 nt10.63□□□□□ -0.71
SMD3P43321 ATS1YAL020C 1002 nt10.61□□□□□ -0.71
SMD3P43321 RSB1YOR049C 1065 nt10.6□□□□□ -0.71
SMD3P43321 SSA1YAL005C 1929 nt10.59□□□□□ -0.71
SMD3P43321 EMI2YDR516C 1503 nt10.58□□□□□ -0.72
SMD3P43321 YDR095CYDR095C 411 nt10.56□□□□□ -0.72
SMD3P43321 YBR220CYBR220C 1683 nt10.53□□□□□ -0.72
SMD3P43321 YBL100CYBL100C 315 nt10.53□□□□□ -0.72
SMD3P43321 NVJ2YPR091C 2313 nt10.47□□□□□ -0.73
SMD3P43321 YDL221WYDL221W 552 nt10.45□□□□□ -0.74
SMD3P43321 SDH1YKL148C 1923 nt10.43□□□□□ -0.74
SMD3P43321 ALF1YNL148C 765 nt10.4□□□□□ -0.74
SMD3P43321 RPP2AYOL039W 321 nt10.38□□□□□ -0.75
SMD3P43321 FUN26YAL022C 1554 nt10.38□□□□□ -0.75
SMD3P43321 BDH2YAL061W 1254 nt10.37□□□□□ -0.75
SMD3P43321 CAC2YML102W 1407 nt10.34□□□□□ -0.75
SMD3P43321 PTP1YDL230W 1008 nt10.33□□□□□ -0.76
SMD3P43321 SEC11YIR022W 504 nt10.3□□□□□ -0.76
SMD3P43321 TRM9YML014W 840 nt10.29□□□□□ -0.76
SMD3P43321 SCC4YER147C 1875 nt10.29□□□□□ -0.76
SMD3P43321 PCH2YBR186W 1695 nt10.28□□□□□ -0.76
SMD3P43321 SRB2YHR041C 633 nt10.24□□□□□ -0.77
SMD3P43321 GUT2YIL155C 1950 nt10.24□□□□□ -0.77
SMD3P43321 SUF2tP(AGG)C 72 nt10.2□□□□□ -0.78
SMD3P43321 SUF10tP(AGG)N 72 nt10.2□□□□□ -0.78
SMD3P43321 IRC15YPL017C 1500 nt10.2□□□□□ -0.78
SMD3P43321 CCT6YDR188W 1641 nt10.18□□□□□ -0.78
SMD3P43321 SIS1YNL007C 1059 nt10.18□□□□□ -0.78
SMD3P43321 GIS3YLR094C 1509 nt10.16□□□□□ -0.78
SMD3P43321 LSM3YLR438C-A 270 nt10.14□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms