RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM23, Length 669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM23	YNR017W	YGR122W	P53272	402 aa		13.76	□□□□□ -0.21
TIM23	YNR017W	NOP8	Q08287	484 aa	Predicted RBP	13.76	□□□□□ -0.21
TIM23	YNR017W	YIL092W	P40497	633 aa		13.75	□□□□□ -0.21
TIM23	YNR017W	CWH41	P53008	833 aa		13.75	□□□□□ -0.21
TIM23	YNR017W	IRC3	Q06683	689 aa		13.75	□□□□□ -0.21
TIM23	YNR017W	DAL5	P15365	543 aa		13.74	□□□□□ -0.21
TIM23	YNR017W	YER156C	P40093	338 aa	Known RBP	13.74	□□□□□ -0.21
TIM23	YNR017W	SMY1	P32364	656 aa	Known RBP	13.73	□□□□□ -0.21
TIM23	YNR017W	RAD24	P32641	659 aa		13.73	□□□□□ -0.21
TIM23	YNR017W	SET1	P38827	1080 aa	Known RBP	13.73	□□□□□ -0.21
TIM23	YNR017W	FCP1	Q03254	732 aa		13.73	□□□□□ -0.21
TIM23	YNR017W	CSI1	Q04368	295 aa		13.73	□□□□□ -0.21
TIM23	YNR017W	RAD2	P07276	1031 aa		13.72	□□□□□ -0.21
TIM23	YNR017W	KIN4	Q01919	800 aa		13.72	□□□□□ -0.21
TIM23	YNR017W	ERO1	Q03103	563 aa		13.71	□□□□□ -0.21
TIM23	YNR017W	RPS19A	P07280	144 aa	Known RBP	13.69	□□□□□ -0.22
TIM23	YNR017W	RPS19B	P07281	144 aa	Predicted RBP	13.69	□□□□□ -0.22
TIM23	YNR017W	SIT4	P20604	311 aa		13.69	□□□□□ -0.22
TIM23	YNR017W	SWC3	P31376	625 aa		13.69	□□□□□ -0.22
TIM23	YNR017W	ITC1	P53125	1264 aa		13.69	□□□□□ -0.22
TIM23	YNR017W	UBP16	Q02863	499 aa		13.69	□□□□□ -0.22
TIM23	YNR017W	SYF1	Q04048	859 aa	Predicted RBP	13.69	□□□□□ -0.22
TIM23	YNR017W	BOI2	P39969	1040 aa		13.68	□□□□□ -0.22
TIM23	YNR017W	CAF20	P12962	161 aa	Known RBP	13.67	□□□□□ -0.22
TIM23	YNR017W	FUN12	P39730	1002 aa	Known RBP	13.67	□□□□□ -0.22
TIM23	YNR017W	PSH1	Q12161	406 aa		13.67	□□□□□ -0.22
TIM23	YNR017W	UBP12	P39538	1254 aa		13.66	□□□□□ -0.22
TIM23	YNR017W	SAC3	P46674	1301 aa		13.65	□□□□□ -0.22
TIM23	YNR017W	TRP5	P00931	707 aa	Known RBP	13.65	□□□□□ -0.22
TIM23	YNR017W	FRD1	P32614	470 aa	Known RBP	13.65	□□□□□ -0.22
TIM23	YNR017W	RPN1	P38764	993 aa	Known RBP	13.65	□□□□□ -0.22
TIM23	YNR017W	HKR1	P41809	1802 aa		13.64	□□□□□ -0.23
TIM23	YNR017W	MTC5	Q03897	1148 aa		13.64	□□□□□ -0.23
TIM23	YNR017W	SAS4	Q04003	481 aa		13.64	□□□□□ -0.23
TIM23	YNR017W	SUP35	P05453	685 aa	Known RBP	13.62	□□□□□ -0.23
TIM23	YNR017W	YNG2	P38806	282 aa	Known RBP	13.61	□□□□□ -0.23
TIM23	YNR017W	GRX6	Q12438	231 aa		13.61	□□□□□ -0.23
TIM23	YNR017W	FAS2	P19097	1887 aa	Known RBP	13.59	□□□□□ -0.23
TIM23	YNR017W	ICL1	P28240	557 aa	Predicted RBP	13.59	□□□□□ -0.23
TIM23	YNR017W	TFA1	P36100	482 aa		13.59	□□□□□ -0.23
TIM23	YNR017W	DPH6	Q12429	685 aa		13.59	□□□□□ -0.23
TIM23	YNR017W	DUR1,2	P32528	1835 aa	Known RBP	13.58	□□□□□ -0.24
TIM23	YNR017W	YKU70	P32807	602 aa		13.57	□□□□□ -0.24
TIM23	YNR017W	ICP55	P40051	511 aa		13.57	□□□□□ -0.24
TIM23	YNR017W	HXT10	P43581	546 aa		13.57	□□□□□ -0.24
TIM23	YNR017W	SPO1	P53541	631 aa		13.57	□□□□□ -0.24
TIM23	YNR017W	SQS1	P53866	767 aa	Known RBP	13.57	□□□□□ -0.24
TIM23	YNR017W	RPS9B	P05755	195 aa	Known RBP	13.56	□□□□□ -0.24
TIM23	YNR017W	POL32	P47110	350 aa		13.56	□□□□□ -0.24
TIM23	YNR017W	HGH1	P48362	394 aa	Known RBP	13.56	□□□□□ -0.24
TIM23	YNR017W	PUF6	Q04373	656 aa	Known RBP	13.56	□□□□□ -0.24
TIM23	YNR017W	SNU66	Q12420	587 aa	Predicted RBP	13.56	□□□□□ -0.24
TIM23	YNR017W	TOP1	P04786	769 aa		13.55	□□□□□ -0.24
TIM23	YNR017W	GCD7	P32502	381 aa	Predicted RBP	13.54	□□□□□ -0.24
TIM23	YNR017W	NGR1	P32831	672 aa	Known RBP	13.54	□□□□□ -0.24
TIM23	YNR017W	RET1	P22276	1149 aa	Known RBP	13.53	□□□□□ -0.24
TIM23	YNR017W	MGM1	P32266	881 aa		13.53	□□□□□ -0.24
TIM23	YNR017W	SHC1	P39000	512 aa		13.53	□□□□□ -0.24
TIM23	YNR017W	ILV3	P39522	585 aa	Known RBP	13.53	□□□□□ -0.24
TIM23	YNR017W	THI3	Q07471	609 aa		13.53	□□□□□ -0.24
TIM23	YNR017W	KRE2	P27809	442 aa		13.52	□□□□□ -0.25
TIM23	YNR017W	PEX21	P50091	288 aa		13.52	□□□□□ -0.25
TIM23	YNR017W	FPK1	P53739	893 aa		13.52	□□□□□ -0.25
TIM23	YNR017W	FIG2	P25653	1609 aa		13.51	□□□□□ -0.25
TIM23	YNR017W	SSF1	P38789	453 aa	Predicted RBP	13.51	□□□□□ -0.25
TIM23	YNR017W	UBX2	Q04228	584 aa		13.51	□□□□□ -0.25
TIM23	YNR017W	ADR1	P07248	1323 aa		13.5	□□□□□ -0.25
TIM23	YNR017W	SSA4	P22202	642 aa	Known RBP	13.5	□□□□□ -0.25
TIM23	YNR017W	RPT4	P53549	437 aa	Known RBP	13.5	□□□□□ -0.25
TIM23	YNR017W	SRC1	Q03707	834 aa		13.5	□□□□□ -0.25
TIM23	YNR017W	ATG20	Q07528	640 aa		13.5	□□□□□ -0.25
TIM23	YNR017W	SPL2	P38839	148 aa		13.49	□□□□□ -0.25
TIM23	YNR017W	DIP2	Q12220	943 aa	Predicted RBP	13.49	□□□□□ -0.25
TIM23	YNR017W	DPL1	Q05567	589 aa		13.48	□□□□□ -0.25
TIM23	YNR017W	SET4	P42948	560 aa		13.47	□□□□□ -0.25
TIM23	YNR017W	GYP5	Q12344	894 aa		13.47	□□□□□ -0.25
TIM23	YNR017W	TIF4632	P39936	914 aa	Known RBP	13.46	□□□□□ -0.25
TIM23	YNR017W	POM152	P39685	1337 aa		13.45	□□□□□ -0.26
TIM23	YNR017W	SLA1	P32790	1244 aa		13.45	□□□□□ -0.26
TIM23	YNR017W	SLI15	P38283	698 aa		13.45	□□□□□ -0.26
TIM23	YNR017W	FPR3	P38911	411 aa	Known RBP	13.45	□□□□□ -0.26
TIM23	YNR017W	NUG1	P40010	520 aa	Known RBP	13.45	□□□□□ -0.26
TIM23	YNR017W	PUS5	Q06244	254 aa		13.45	□□□□□ -0.26
TIM23	YNR017W	NCB2	Q92317	146 aa		13.45	□□□□□ -0.26
TIM23	YNR017W	SEC18	P18759	758 aa	Known RBP	13.44	□□□□□ -0.26
TIM23	YNR017W	NMD2	P38798	1089 aa	Known RBP	13.44	□□□□□ -0.26
TIM23	YNR017W	MSM1	P22438	575 aa		13.42	□□□□□ -0.26
TIM23	YNR017W	IRC4	Q03036	179 aa		13.42	□□□□□ -0.26
TIM23	YNR017W	LCB1	P25045	558 aa	Known RBP	13.41	□□□□□ -0.26
TIM23	YNR017W	GAS5	Q08193	484 aa		13.41	□□□□□ -0.26
TIM23	YNR017W	RRG1	Q12167	365 aa	Predicted RBP	13.4	□□□□□ -0.26
TIM23	YNR017W	AI2	P03876	854 aa		13.39	□□□□□ -0.27
TIM23	YNR017W	BDP1	P46678	594 aa		13.38	□□□□□ -0.27
TIM23	YNR017W	PSF3	Q12146	194 aa		13.38	□□□□□ -0.27
TIM23	YNR017W	RRI2	Q12348	645 aa		13.38	□□□□□ -0.27
TIM23	YNR017W	AFG2	P32794	780 aa		13.37	□□□□□ -0.27
TIM23	YNR017W	GLO3	P38682	493 aa	Known RBP	13.37	□□□□□ -0.27
TIM23	YNR017W	GSM1	P42950	618 aa		13.37	□□□□□ -0.27
TIM23	YNR017W	YNL193W	P53870	558 aa		13.37	□□□□□ -0.27
TIM23	YNR017W	PRP42	Q03776	544 aa	Known RBP	13.37	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms