RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM23, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM23YNR017W MON2P48563 1636 aaPredicted RBP21.82■■□□□ 1.08
TIM23YNR017W INO80P53115 1489 aa21.75■■□□□ 1.07
TIM23YNR017W SGS1P35187 1447 aa21.07■□□□□ 0.96
TIM23YNR017W TCB3Q03640 1545 aaKnown RBP20.98■□□□□ 0.95
TIM23YNR017W TY1B-DR4Q07793 1604 aa20.87■□□□□ 0.93
TIM23YNR017W DNA2P38859 1522 aa20.72■□□□□ 0.91
TIM23YNR017W SWR1Q05471 1514 aa20.7■□□□□ 0.9
TIM23YNR017W KOG1P38873 1557 aa20.46■□□□□ 0.87
TIM23YNR017W HSL1P34244 1518 aa20.27■□□□□ 0.83
TIM23YNR017W SPT6P23615 1451 aaKnown RBP20.2■□□□□ 0.82
TIM23YNR017W RSE1Q04693 1361 aaKnown RBP20.11■□□□□ 0.81
TIM23YNR017W SPA2P23201 1466 aaKnown RBP20.04■□□□□ 0.8
TIM23YNR017W HIR3P47171 1648 aa19.86■□□□□ 0.77
TIM23YNR017W SSN2P38931 1420 aa19.75■□□□□ 0.75
TIM23YNR017W XRN1P22147 1528 aaKnown RBP19.57■□□□□ 0.72
TIM23YNR017W THO2P53552 1597 aaKnown RBP19.49■□□□□ 0.71
TIM23YNR017W ECM5Q03214 1411 aa19.44■□□□□ 0.7
TIM23YNR017W BUD4P47136 1447 aa19.42■□□□□ 0.7
TIM23YNR017W REV3P14284 1504 aa19.28■□□□□ 0.68
TIM23YNR017W MDS3P53094 1487 aa19.18■□□□□ 0.66
TIM23YNR017W ATG2P53855 1592 aa19.12■□□□□ 0.65
TIM23YNR017W SIN3P22579 1536 aa19.12■□□□□ 0.65
TIM23YNR017W PEP1P32319 1579 aa19.09■□□□□ 0.65
TIM23YNR017W DRS1P32892 752 aaKnown RBP19.08■□□□□ 0.64
TIM23YNR017W MTC1P47018 478 aaKnown RBP18.99■□□□□ 0.63
TIM23YNR017W SSK2P53599 1579 aa18.98■□□□□ 0.63
TIM23YNR017W TAF2P23255 1407 aa18.97■□□□□ 0.63
TIM23YNR017W ESP1Q03018 1630 aa18.89■□□□□ 0.61
TIM23YNR017W SKI3P17883 1432 aaKnown RBP18.83■□□□□ 0.6
TIM23YNR017W MYO2P19524 1574 aaKnown RBP18.71■□□□□ 0.59
TIM23YNR017W BPT1P14772 1559 aa18.64■□□□□ 0.57
TIM23YNR017W YPK9Q12697 1472 aa18.58■□□□□ 0.56
TIM23YNR017W SCC2Q04002 1493 aa18.49■□□□□ 0.55
TIM23YNR017W UFD4P33202 1483 aa18.46■□□□□ 0.54
TIM23YNR017W RPO31P04051 1460 aa18.39■□□□□ 0.53
TIM23YNR017W YCF1P39109 1515 aaKnown RBP18.33■□□□□ 0.53
TIM23YNR017W TY2B-LR1P0C2J3 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-FP0CX63 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-GR2P0CX64 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-CP25384 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-DR2Q03494 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY1B-DR1Q03855 1755 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-DR3Q07791 1770 aaKnown RBP18.31■□□□□ 0.52
TIM23YNR017W TY2B-OR1Q12113 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-DR1Q12472 1770 aa18.31■□□□□ 0.52
TIM23YNR017W TY2B-OR2Q12501 1770 aa18.31■□□□□ 0.52
TIM23YNR017W POL1P13382 1468 aa18.21■□□□□ 0.51
TIM23YNR017W RKR1Q04781 1562 aa18.19■□□□□ 0.5
TIM23YNR017W TOP2P06786 1428 aaKnown RBP18.15■□□□□ 0.5
TIM23YNR017W TY1B-BRQ12193 1756 aa18.14■□□□□ 0.5
TIM23YNR017W TY1B-GR3Q12316 1755 aa18.14■□□□□ 0.5
TIM23YNR017W TY1B-ORQ92393 1755 aa18.14■□□□□ 0.5
TIM23YNR017W CDC25P04821 1589 aa18.13■□□□□ 0.49
TIM23YNR017W TY1B-DR3Q99231 1755 aa18.12■□□□□ 0.49
TIM23YNR017W TY2B-BQ12491 1770 aa18.12■□□□□ 0.49
TIM23YNR017W CHD1P32657 1468 aa18.07■□□□□ 0.48
TIM23YNR017W STU1P38198 1513 aa18.07■□□□□ 0.48
TIM23YNR017W TY1B-HO13535 1793 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-DR5P0C2I2 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-DR6P0C2I3 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-LR2P0C2I5 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-LR3P0C2I6 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W TY1B-PR1P0C2I9 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W TY1B-PR2P0C2J0 1756 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-PR3P0C2J1 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W TY1B-JR1P47098 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-ML2Q03434 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W TY1B-ER1Q03612 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-ML1Q04711 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W TY1B-GR2Q12269 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-OLQ12273 1755 aa18.05■□□□□ 0.48
TIM23YNR017W TY1B-PLQ12414 1755 aaKnown RBP18.05■□□□□ 0.48
TIM23YNR017W ESC1Q03661 1658 aaKnown RBP18.04■□□□□ 0.48
TIM23YNR017W YOR1P53049 1477 aa18.01■□□□□ 0.47
TIM23YNR017W RQC2Q12532 1038 aaKnown RBP17.96■□□□□ 0.47
TIM23YNR017W SMC4Q12267 1418 aa17.96■□□□□ 0.47
TIM23YNR017W PAN1P32521 1480 aa17.95■□□□□ 0.46
TIM23YNR017W DNF1P32660 1571 aa17.91■□□□□ 0.46
TIM23YNR017W MMS22Q06164 1454 aa17.89■□□□□ 0.45
TIM23YNR017W RPA190P10964 1664 aaKnown RBP17.86■□□□□ 0.45
TIM23YNR017W SPP41P38904 1435 aa17.77■□□□□ 0.44
TIM23YNR017W YTA7P40340 1379 aa17.76■□□□□ 0.43
TIM23YNR017W MET5P47169 1442 aa17.73■□□□□ 0.43
TIM23YNR017W MYO4P32492 1471 aa17.72■□□□□ 0.43
TIM23YNR017W TY1B-JR2P47100 1755 aaKnown RBP17.71■□□□□ 0.43
TIM23YNR017W TY1B-ER2Q03619 1755 aa17.71■□□□□ 0.43
TIM23YNR017W TY1B-MR1Q04214 1755 aa17.71■□□□□ 0.43
TIM23YNR017W TY1B-MR2Q04670 1755 aaKnown RBP17.71■□□□□ 0.43
TIM23YNR017W TY1B-LR1Q12088 1755 aaKnown RBP17.71■□□□□ 0.43
TIM23YNR017W TY1B-NL1Q12112 1755 aa17.71■□□□□ 0.43
TIM23YNR017W TY1B-GR1Q12141 1755 aa17.71■□□□□ 0.43
TIM23YNR017W TY1B-BLQ12490 1755 aa17.71■□□□□ 0.43
TIM23YNR017W MIF2P35201 549 aa17.69■□□□□ 0.42
TIM23YNR017W TRM732Q03496 1420 aa17.69■□□□□ 0.42
TIM23YNR017W VTH1P40438 1549 aa17.66■□□□□ 0.42
TIM23YNR017W VTH2P40890 1549 aa17.66■□□□□ 0.42
TIM23YNR017W TSC11P40061 1430 aa17.64■□□□□ 0.41
TIM23YNR017W NTE1Q04958 1679 aa17.61■□□□□ 0.41
TIM23YNR017W LTE1P07866 1435 aa17.57■□□□□ 0.4
TIM23YNR017W RPO21P04050 1733 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms