RNA–Protein interactions for RNA: YML072C

TCB3, Transcript of Cortical ER protein involved in ER-plasma membrane tethering, yeast

Gene TCB3, Length 4,638 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCB3	YML072C	DPH6	Q12429	685 aa		4.65	□□□□□ -1.66
TCB3	YML072C	HGH1	P48362	394 aa	Known RBP	4.65	□□□□□ -1.67
TCB3	YML072C	HIM1	Q06674	414 aa		4.65	□□□□□ -1.67
TCB3	YML072C	NCB2	Q92317	146 aa		4.65	□□□□□ -1.67
TCB3	YML072C	YGL082W	P53155	381 aa		4.65	□□□□□ -1.67
TCB3	YML072C	PUS5	Q06244	254 aa		4.65	□□□□□ -1.67
TCB3	YML072C	FUN12	P39730	1002 aa	Known RBP	4.64	□□□□□ -1.67
TCB3	YML072C	CST6	P40535	587 aa		4.64	□□□□□ -1.67
TCB3	YML072C	THS1	P04801	734 aa	Known RBP	4.64	□□□□□ -1.67
TCB3	YML072C	ACK1	Q07622	623 aa	Predicted RBP	4.64	□□□□□ -1.67
TCB3	YML072C	TYW1	Q08960	810 aa	Known RBP	4.63	□□□□□ -1.67
TCB3	YML072C	URB1	P34241	1764 aa	Known RBP	4.63	□□□□□ -1.67
TCB3	YML072C	SEC20	P28791	383 aa		4.63	□□□□□ -1.67
TCB3	YML072C	PES4	P39684	611 aa		4.63	□□□□□ -1.67
TCB3	YML072C	JJJ2	P46997	583 aa		4.62	□□□□□ -1.67
TCB3	YML072C	YLR271W	Q06152	274 aa		4.62	□□□□□ -1.67
TCB3	YML072C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
TCB3	YML072C	SSF1	P38789	453 aa	Predicted RBP	4.62	□□□□□ -1.67
TCB3	YML072C	TPM1	P17536	199 aa	Known RBP	4.62	□□□□□ -1.67
TCB3	YML072C	PIF1	P07271	859 aa		4.61	□□□□□ -1.67
TCB3	YML072C	BMS1	Q08965	1183 aa	Known RBP	4.61	□□□□□ -1.67
TCB3	YML072C	FPR3	P38911	411 aa	Known RBP	4.61	□□□□□ -1.67
TCB3	YML072C	YOL057W	Q08225	711 aa		4.61	□□□□□ -1.67
TCB3	YML072C	ICL1	P28240	557 aa	Predicted RBP	4.61	□□□□□ -1.67
TCB3	YML072C	SSA4	P22202	642 aa	Known RBP	4.61	□□□□□ -1.67
TCB3	YML072C	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
TCB3	YML072C	MRP7	P12687	371 aa		4.6	□□□□□ -1.67
TCB3	YML072C	RRI2	Q12348	645 aa		4.6	□□□□□ -1.67
TCB3	YML072C	FRD1	P32614	470 aa	Known RBP	4.6	□□□□□ -1.67
TCB3	YML072C	YKR018C	P36114	725 aa		4.6	□□□□□ -1.67
TCB3	YML072C	TRM44	Q02648	567 aa	Known RBP	4.6	□□□□□ -1.67
TCB3	YML072C	CDC45	Q08032	650 aa		4.6	□□□□□ -1.67
TCB3	YML072C	PSH1	Q12161	406 aa		4.6	□□□□□ -1.67
TCB3	YML072C	TPS3	P38426	1054 aa	Known RBP	4.6	□□□□□ -1.67
TCB3	YML072C	MTC5	Q03897	1148 aa		4.6	□□□□□ -1.67
TCB3	YML072C	SNF2	P22082	1703 aa		4.6	□□□□□ -1.67
TCB3	YML072C	SMY1	P32364	656 aa	Known RBP	4.59	□□□□□ -1.67
TCB3	YML072C	GEF1	P37020	779 aa		4.59	□□□□□ -1.67
TCB3	YML072C	EMP47	P43555	445 aa		4.59	□□□□□ -1.67
TCB3	YML072C	RAD2	P07276	1031 aa		4.59	□□□□□ -1.67
TCB3	YML072C	SNU71	P53207	620 aa	Known RBP	4.59	□□□□□ -1.67
TCB3	YML072C	ECM16	Q04217	1267 aa	Known RBP	4.59	□□□□□ -1.67
TCB3	YML072C	DPL1	Q05567	589 aa		4.59	□□□□□ -1.68
TCB3	YML072C	CST9	Q06032	482 aa		4.59	□□□□□ -1.68
TCB3	YML072C	APC1	P53886	1748 aa		4.59	□□□□□ -1.68
TCB3	YML072C	NUP133	P36161	1157 aa		4.58	□□□□□ -1.68
TCB3	YML072C	VAB2	P40003	282 aa		4.58	□□□□□ -1.68
TCB3	YML072C	ADR1	P07248	1323 aa		4.58	□□□□□ -1.68
TCB3	YML072C	LYS14	P40971	790 aa		4.58	□□□□□ -1.68
TCB3	YML072C	YDL144C	Q07589	356 aa		4.58	□□□□□ -1.68
TCB3	YML072C	TY3A-G	Q12173	290 aa		4.58	□□□□□ -1.68
TCB3	YML072C	TY3A-I	Q99219	290 aa		4.58	□□□□□ -1.68
TCB3	YML072C	PRD1	P25375	712 aa		4.58	□□□□□ -1.68
TCB3	YML072C	VPS27	P40343	622 aa	Known RBP	4.58	□□□□□ -1.68
TCB3	YML072C	MPP10	P47083	593 aa	Known RBP	4.58	□□□□□ -1.68
TCB3	YML072C	FKS3	Q04952	1785 aa		4.57	□□□□□ -1.68
TCB3	YML072C	FET4	P40988	552 aa		4.57	□□□□□ -1.68
TCB3	YML072C	JIP4	Q03361	876 aa		4.57	□□□□□ -1.68
TCB3	YML072C	PRP42	Q03776	544 aa	Known RBP	4.57	□□□□□ -1.68
TCB3	YML072C	YPP1	P46951	817 aa		4.57	□□□□□ -1.68
TCB3	YML072C	PIP2	P52960	996 aa		4.57	□□□□□ -1.68
TCB3	YML072C	YBR287W	P38355	427 aa		4.56	□□□□□ -1.68
TCB3	YML072C	NCS6	P53088	359 aa		4.56	□□□□□ -1.68
TCB3	YML072C	EAR1	Q03212	550 aa		4.56	□□□□□ -1.68
TCB3	YML072C	MCD4	P36051	919 aa		4.56	□□□□□ -1.68
TCB3	YML072C	SAC3	P46674	1301 aa		4.56	□□□□□ -1.68
TCB3	YML072C	LEO1	P38439	464 aa		4.56	□□□□□ -1.68
TCB3	YML072C	RRP8	P38961	392 aa	Known RBP	4.56	□□□□□ -1.68
TCB3	YML072C	GIN4	Q12263	1142 aa		4.56	□□□□□ -1.68
TCB3	YML072C	MSH4	P40965	878 aa	Predicted RBP	4.55	□□□□□ -1.68
TCB3	YML072C	HUL5	P53119	910 aa		4.55	□□□□□ -1.68
TCB3	YML072C	TUM1	Q08686	304 aa	Known RBP	4.55	□□□□□ -1.68
TCB3	YML072C	TY4B-H	P0C2J7	1802 aa		4.55	□□□□□ -1.68
TCB3	YML072C	TY4B-J	P47024	1803 aa		4.55	□□□□□ -1.68
TCB3	YML072C	RBA50	Q04418	439 aa		4.55	□□□□□ -1.68
TCB3	YML072C	TPD3	P31383	635 aa		4.55	□□□□□ -1.68
TCB3	YML072C	NPL4	P33755	580 aa		4.55	□□□□□ -1.68
TCB3	YML072C	YIL089W	P40500	205 aa		4.55	□□□□□ -1.68
TCB3	YML072C	SPR3	P41901	512 aa		4.55	□□□□□ -1.68
TCB3	YML072C	ATG1	P53104	897 aa		4.55	□□□□□ -1.68
TCB3	YML072C	DUS1	P53759	423 aa	Known RBP	4.55	□□□□□ -1.68
TCB3	YML072C	COQ4	O13525	335 aa		4.54	□□□□□ -1.68
TCB3	YML072C	NGR1	P32831	672 aa	Known RBP	4.54	□□□□□ -1.68
TCB3	YML072C	YFL040W	P43562	540 aa		4.54	□□□□□ -1.68
TCB3	YML072C	APL6	P46682	809 aa		4.54	□□□□□ -1.68
TCB3	YML072C	NIT1	P40447	199 aa		4.54	□□□□□ -1.68
TCB3	YML072C	KIN4	Q01919	800 aa		4.54	□□□□□ -1.68
TCB3	YML072C	CBP1	P07252	654 aa		4.54	□□□□□ -1.68
TCB3	YML072C	HPR1	P17629	752 aa	Known RBP	4.54	□□□□□ -1.68
TCB3	YML072C	AFG2	P32794	780 aa		4.54	□□□□□ -1.68
TCB3	YML072C	NOP2	P40991	618 aa	Known RBP	4.54	□□□□□ -1.68
TCB3	YML072C	YGR117C	P53270	476 aa		4.54	□□□□□ -1.68
TCB3	YML072C	UBP16	Q02863	499 aa		4.54	□□□□□ -1.68
TCB3	YML072C	MLP1	Q02455	1875 aa	Known RBP	4.53	□□□□□ -1.68
TCB3	YML072C	SDH2	P21801	266 aa		4.53	□□□□□ -1.68
TCB3	YML072C	OSH3	P38713	996 aa	Known RBP	4.53	□□□□□ -1.68
TCB3	YML072C	CLF1	Q12309	687 aa	Predicted RBP	4.53	□□□□□ -1.68
TCB3	YML072C	OCT1	P35999	772 aa		4.53	□□□□□ -1.68
TCB3	YML072C	ICP55	P40051	511 aa		4.53	□□□□□ -1.68
TCB3	YML072C	VPS53	P47061	822 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms