RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YIR042CP40586 236 aa10.21□□□□□ -0.78
SFP1YLR403W YJR008WP47085 338 aa10.21□□□□□ -0.78
SFP1YLR403W HEH2Q03281 663 aa10.21□□□□□ -0.78
SFP1YLR403W TFB4Q12004 338 aa10.21□□□□□ -0.78
SFP1YLR403W YEL1P34225 687 aa10.2□□□□□ -0.78
SFP1YLR403W HOT1Q03213 719 aa10.19□□□□□ -0.78
SFP1YLR403W MSH6Q03834 1242 aa10.19□□□□□ -0.78
SFP1YLR403W HSL1P34244 1518 aa10.19□□□□□ -0.78
SFP1YLR403W RUD3Q12234 484 aaKnown RBP10.19□□□□□ -0.78
SFP1YLR403W RIA1P53893 1110 aa10.18□□□□□ -0.78
SFP1YLR403W CDC31P06704 161 aaKnown RBP10.18□□□□□ -0.78
SFP1YLR403W CEP3P40969 608 aa10.18□□□□□ -0.78
SFP1YLR403W REX2P54964 269 aaKnown RBP10.18□□□□□ -0.78
SFP1YLR403W AOS1Q06624 347 aa10.18□□□□□ -0.78
SFP1YLR403W BUD14P27637 709 aa10.17□□□□□ -0.78
SFP1YLR403W YME2P32843 850 aa10.17□□□□□ -0.78
SFP1YLR403W SHC1P39000 512 aa10.17□□□□□ -0.78
SFP1YLR403W STU2P46675 888 aa10.17□□□□□ -0.78
SFP1YLR403W MRX12P47084 519 aa10.17□□□□□ -0.78
SFP1YLR403W YDL144CQ07589 356 aa10.17□□□□□ -0.78
SFP1YLR403W TSC11P40061 1430 aa10.17□□□□□ -0.78
SFP1YLR403W UBP13P38187 747 aa10.16□□□□□ -0.78
SFP1YLR403W RRP1P35178 278 aaPredicted RBP10.16□□□□□ -0.78
SFP1YLR403W ILV3P39522 585 aaKnown RBP10.16□□□□□ -0.78
SFP1YLR403W GIR2Q03768 265 aaPredicted RBP10.16□□□□□ -0.78
SFP1YLR403W CMP2P14747 604 aa10.15□□□□□ -0.78
SFP1YLR403W UGA3P26370 528 aa10.15□□□□□ -0.78
SFP1YLR403W MRF1P30775 413 aaPredicted RBP10.15□□□□□ -0.78
SFP1YLR403W RKM3P38222 552 aa10.15□□□□□ -0.78
SFP1YLR403W FAR11P53917 953 aa10.15□□□□□ -0.78
SFP1YLR403W AVO1Q08236 1176 aa10.15□□□□□ -0.78
SFP1YLR403W HSP42Q12329 375 aa10.15□□□□□ -0.78
SFP1YLR403W RPO31P04051 1460 aa10.15□□□□□ -0.78
SFP1YLR403W GAL11P19659 1081 aa10.14□□□□□ -0.79
SFP1YLR403W MSM1P22438 575 aa10.14□□□□□ -0.79
SFP1YLR403W SSF1P38789 453 aaPredicted RBP10.14□□□□□ -0.79
SFP1YLR403W YPL225WQ08971 146 aaKnown RBP10.14□□□□□ -0.79
SFP1YLR403W GEA1P47102 1408 aaPredicted RBP10.14□□□□□ -0.79
SFP1YLR403W ATG14P38270 344 aa10.14□□□□□ -0.79
SFP1YLR403W KRE28Q04431 385 aa10.14□□□□□ -0.79
SFP1YLR403W RVB2Q12464 471 aaKnown RBP10.14□□□□□ -0.79
SFP1YLR403W RFC1P38630 861 aaKnown RBP10.13□□□□□ -0.79
SFP1YLR403W HXT5P38695 592 aa10.13□□□□□ -0.79
SFP1YLR403W PET100P38958 111 aa10.13□□□□□ -0.79
SFP1YLR403W TLG2Q08144 397 aa10.13□□□□□ -0.79
SFP1YLR403W SGT2Q12118 346 aaKnown RBP10.13□□□□□ -0.79
SFP1YLR403W REV3P14284 1504 aa10.13□□□□□ -0.79
SFP1YLR403W YFR006WP43590 535 aa10.13□□□□□ -0.79
SFP1YLR403W STE20Q03497 939 aaKnown RBP10.13□□□□□ -0.79
SFP1YLR403W VPS20Q04272 221 aa10.13□□□□□ -0.79
SFP1YLR403W GCN2P15442 1659 aa10.13□□□□□ -0.79
SFP1YLR403W CDC48P25694 835 aaKnown RBP10.12□□□□□ -0.79
SFP1YLR403W MAM1P40065 302 aa10.11□□□□□ -0.79
SFP1YLR403W PRP43P53131 767 aaKnown RBP10.11□□□□□ -0.79
SFP1YLR403W INP2Q03824 705 aa10.11□□□□□ -0.79
SFP1YLR403W PDS5Q04264 1277 aa10.11□□□□□ -0.79
SFP1YLR403W CDC45Q08032 650 aa10.11□□□□□ -0.79
SFP1YLR403W PCL8Q08966 492 aa10.11□□□□□ -0.79
SFP1YLR403W MHP1P43638 1398 aa10.11□□□□□ -0.79
SFP1YLR403W SAC3P46674 1301 aa10.11□□□□□ -0.79
SFP1YLR403W STE5P32917 917 aa10.11□□□□□ -0.79
SFP1YLR403W RPL17BP46990 184 aaKnown RBP10.11□□□□□ -0.79
SFP1YLR403W JIP5Q06214 492 aaPredicted RBP10.11□□□□□ -0.79
SFP1YLR403W MRPS28P21771 286 aa10.1□□□□□ -0.79
SFP1YLR403W ARC19P33204 171 aaKnown RBP10.1□□□□□ -0.79
SFP1YLR403W UBP14P38237 781 aaKnown RBP10.1□□□□□ -0.79
SFP1YLR403W CEX1Q12453 761 aa10.1□□□□□ -0.79
SFP1YLR403W TRS33Q99394 268 aa10.1□□□□□ -0.79
SFP1YLR403W CSE1P33307 960 aa10.1□□□□□ -0.79
SFP1YLR403W PEX5P35056 612 aa10.1□□□□□ -0.79
SFP1YLR403W SDS3P40505 327 aa10.1□□□□□ -0.79
SFP1YLR403W HAP5Q02516 242 aa10.1□□□□□ -0.79
SFP1YLR403W APC5Q08683 685 aa10.1□□□□□ -0.79
SFP1YLR403W RKM4Q12504 494 aa10.1□□□□□ -0.79
SFP1YLR403W YKL068W-AQ3E826 78 aa10.1□□□□□ -0.79
SFP1YLR403W HMG1P12683 1054 aa10.09□□□□□ -0.79
SFP1YLR403W HIR2P32480 875 aa10.09□□□□□ -0.79
SFP1YLR403W KAR9P32526 644 aa10.09□□□□□ -0.79
SFP1YLR403W PTH2P34222 208 aa10.09□□□□□ -0.79
SFP1YLR403W MPE1P35728 441 aaKnown RBP10.09□□□□□ -0.79
SFP1YLR403W RSM28Q03430 361 aa10.09□□□□□ -0.79
SFP1YLR403W YMR111CQ04461 462 aaPredicted RBP10.09□□□□□ -0.79
SFP1YLR403W SCC2Q04002 1493 aa10.09□□□□□ -0.79
SFP1YLR403W MIC60P36112 540 aa10.08□□□□□ -0.8
SFP1YLR403W RPC37P36121 282 aa10.08□□□□□ -0.8
SFP1YLR403W DSL1P53847 754 aa10.08□□□□□ -0.8
SFP1YLR403W YPR097WQ06839 1073 aa10.08□□□□□ -0.8
SFP1YLR403W CDC37P06101 506 aaKnown RBP10.08□□□□□ -0.8
SFP1YLR403W COY1P34237 679 aa10.08□□□□□ -0.8
SFP1YLR403W CIC1P38779 376 aaKnown RBP10.08□□□□□ -0.8
SFP1YLR403W SSZ1P38788 538 aaKnown RBP10.08□□□□□ -0.8
SFP1YLR403W RTF1P53064 558 aa10.08□□□□□ -0.8
SFP1YLR403W SEC66P33754 206 aa10.07□□□□□ -0.8
SFP1YLR403W UBP12P39538 1254 aa10.07□□□□□ -0.8
SFP1YLR403W YJR142WP47173 342 aa10.07□□□□□ -0.8
SFP1YLR403W ERB1Q04660 807 aaKnown RBP10.07□□□□□ -0.8
SFP1YLR403W ARR2Q06597 130 aa10.07□□□□□ -0.8
SFP1YLR403W CYC8P14922 966 aa10.06□□□□□ -0.8
SFP1YLR403W VPS35P34110 944 aa10.06□□□□□ -0.8
SFP1YLR403W PBY1P38254 753 aa10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms