RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YNL050CP53952 270 aa14.22□□□□□ -0.13
BDF1YLR399C DUR1,2P32528 1835 aaKnown RBP14.21□□□□□ -0.13
BDF1YLR399C YGL082WP53155 381 aa14.21□□□□□ -0.13
BDF1YLR399C ELM1P32801 640 aa14.21□□□□□ -0.14
BDF1YLR399C MRS2Q01926 470 aa14.21□□□□□ -0.14
BDF1YLR399C SML1Q04964 104 aa14.21□□□□□ -0.14
BDF1YLR399C RPL19AP0CX82 189 aaKnown RBP14.2□□□□□ -0.14
BDF1YLR399C RPL19BP0CX83 189 aaPredicted RBP14.2□□□□□ -0.14
BDF1YLR399C YMR102CQ03177 834 aa14.2□□□□□ -0.14
BDF1YLR399C BDP1P46678 594 aa14.19□□□□□ -0.14
BDF1YLR399C SGD1Q06132 899 aa14.19□□□□□ -0.14
BDF1YLR399C YGR122WP53272 402 aa14.18□□□□□ -0.14
BDF1YLR399C TLG2Q08144 397 aa14.18□□□□□ -0.14
BDF1YLR399C MRC1P25588 1096 aa14.18□□□□□ -0.14
BDF1YLR399C PRX1P34227 261 aaKnown RBP14.18□□□□□ -0.14
BDF1YLR399C GDT1P38301 280 aaPredicted RBP14.18□□□□□ -0.14
BDF1YLR399C CTI6Q08923 506 aa14.17□□□□□ -0.14
BDF1YLR399C YKL068W-AQ3E826 78 aa14.17□□□□□ -0.14
BDF1YLR399C MAM1P40065 302 aa14.16□□□□□ -0.14
BDF1YLR399C MTR4P47047 1073 aaKnown RBP14.16□□□□□ -0.14
BDF1YLR399C JSN1P47135 1091 aaKnown RBP RIP-Chip data14.16□□□□□ -0.14not detected
BDF1YLR399C YOL087CQ99247 1116 aa14.16□□□□□ -0.14
BDF1YLR399C RTT107P38850 1070 aa14.16□□□□□ -0.14
BDF1YLR399C VPS41P38959 992 aa14.16□□□□□ -0.14
BDF1YLR399C RAD24P32641 659 aa14.15□□□□□ -0.14
BDF1YLR399C PEX14P53112 341 aa14.15□□□□□ -0.14
BDF1YLR399C ETT1Q08421 412 aaKnown RBP14.15□□□□□ -0.14
BDF1YLR399C CTH1P47976 325 aa14.14□□□□□ -0.15
BDF1YLR399C RMD1Q03441 430 aa14.14□□□□□ -0.15
BDF1YLR399C SRC1Q03707 834 aa14.14□□□□□ -0.15
BDF1YLR399C RPN7Q06103 429 aaKnown RBP14.14□□□□□ -0.15
BDF1YLR399C MSH1P25846 959 aa14.13□□□□□ -0.15
BDF1YLR399C GCD7P32502 381 aaPredicted RBP14.13□□□□□ -0.15
BDF1YLR399C TTI1P36097 1038 aa14.13□□□□□ -0.15
BDF1YLR399C SIC1P38634 284 aa14.13□□□□□ -0.15
BDF1YLR399C ENT3P47160 408 aa14.12□□□□□ -0.15
BDF1YLR399C DPS1P04802 557 aaKnown RBP14.11□□□□□ -0.15
BDF1YLR399C RPS24AP0CX31 135 aaKnown RBP14.11□□□□□ -0.15
BDF1YLR399C RPS24BP0CX32 135 aaKnown RBP14.11□□□□□ -0.15
BDF1YLR399C NTH2P35172 780 aa14.11□□□□□ -0.15
BDF1YLR399C TSR3Q12094 313 aaKnown RBP14.11□□□□□ -0.15
BDF1YLR399C COG4Q06096 861 aa14.11□□□□□ -0.15
BDF1YLR399C OSW7P43611 510 aa14.1□□□□□ -0.15
BDF1YLR399C CTF18P49956 741 aa14.1□□□□□ -0.15
BDF1YLR399C COQ4O13525 335 aa14.1□□□□□ -0.15
BDF1YLR399C VMS1Q04311 632 aaKnown RBP14.1□□□□□ -0.15
BDF1YLR399C NOP8Q08287 484 aaPredicted RBP14.1□□□□□ -0.15
BDF1YLR399C AIM9P40053 627 aaKnown RBP14.09□□□□□ -0.15
BDF1YLR399C GYL1Q04322 720 aa14.09□□□□□ -0.15
BDF1YLR399C TFC8Q12308 588 aa14.09□□□□□ -0.15
BDF1YLR399C MSH3P25336 1018 aa14.08□□□□□ -0.15
BDF1YLR399C GIN4Q12263 1142 aa14.08□□□□□ -0.15
BDF1YLR399C PET111P08468 800 aa14.08□□□□□ -0.16
BDF1YLR399C SWC3P31376 625 aa14.08□□□□□ -0.16
BDF1YLR399C AAP1P37898 856 aaKnown RBP14.08□□□□□ -0.16
BDF1YLR399C CPS1P27614 576 aa14.07□□□□□ -0.16
BDF1YLR399C PRP3Q03338 469 aaPredicted RBP14.07□□□□□ -0.16
BDF1YLR399C RIM20Q12033 661 aa14.07□□□□□ -0.16
BDF1YLR399C DDP1Q99321 188 aaKnown RBP14.07□□□□□ -0.16
BDF1YLR399C FYV10P40492 516 aa14.06□□□□□ -0.16
BDF1YLR399C CPA2P03965 1118 aaKnown RBP14.06□□□□□ -0.16
BDF1YLR399C GPA1P08539 472 aa14.06□□□□□ -0.16
BDF1YLR399C RDS1P25611 832 aa14.06□□□□□ -0.16
BDF1YLR399C ARP5P53946 755 aa14.06□□□□□ -0.16
BDF1YLR399C APC1P53886 1748 aa14.05□□□□□ -0.16
BDF1YLR399C TY1B-NL2Q99337 1749 aaKnown RBP14.05□□□□□ -0.16
BDF1YLR399C RIM101P33400 625 aa14.05□□□□□ -0.16
BDF1YLR399C YER130CP39959 443 aa14.05□□□□□ -0.16
BDF1YLR399C RIA1P53893 1110 aa14.05□□□□□ -0.16
BDF1YLR399C PSE1P32337 1089 aaKnown RBP14.04□□□□□ -0.16
BDF1YLR399C PSH1Q12161 406 aa14.04□□□□□ -0.16
BDF1YLR399C MSH4P40965 878 aaPredicted RBP14.03□□□□□ -0.16
BDF1YLR399C PET123P17558 318 aa14.03□□□□□ -0.16
BDF1YLR399C RRM3P38766 723 aa14.03□□□□□ -0.16
BDF1YLR399C UBP10P53874 792 aaPredicted RBP14.02□□□□□ -0.16
BDF1YLR399C WAR1Q03631 944 aa14.02□□□□□ -0.16
BDF1YLR399C HSP104P31539 908 aaKnown RBP14.02□□□□□ -0.17
BDF1YLR399C MVP1P40959 511 aaKnown RBP14.02□□□□□ -0.17
BDF1YLR399C RRB1Q04225 511 aaKnown RBP14.02□□□□□ -0.17
BDF1YLR399C DEF1P35732 738 aaKnown RBP14.01□□□□□ -0.17
BDF1YLR399C BOI2P39969 1040 aa14.01□□□□□ -0.17
BDF1YLR399C PCH2P38126 564 aa14□□□□□ -0.17
BDF1YLR399C SLD2P34252 453 aa13.99□□□□□ -0.17
BDF1YLR399C YNL035CP53962 389 aaKnown RBP13.99□□□□□ -0.17
BDF1YLR399C ECM21P38167 1117 aaKnown RBP13.98□□□□□ -0.17
BDF1YLR399C NOC2P39744 710 aaKnown RBP13.98□□□□□ -0.17
BDF1YLR399C ADE6P38972 1358 aaKnown RBP13.98□□□□□ -0.17
BDF1YLR399C SRP40P32583 406 aaPredicted RBP13.97□□□□□ -0.17
BDF1YLR399C APL4Q12028 832 aa13.97□□□□□ -0.17
BDF1YLR399C RBA50Q04418 439 aa13.97□□□□□ -0.17
BDF1YLR399C ELG1Q12050 791 aa13.97□□□□□ -0.17
BDF1YLR399C SWH1P35845 1188 aa13.96□□□□□ -0.17
BDF1YLR399C MAL33P38157 468 aa13.96□□□□□ -0.17
BDF1YLR399C MRPS35P53292 345 aa13.96□□□□□ -0.17
BDF1YLR399C PDR18P53756 1333 aa13.96□□□□□ -0.17
BDF1YLR399C MRP7P12687 371 aa13.95□□□□□ -0.18
BDF1YLR399C TPM1P17536 199 aaKnown RBP13.95□□□□□ -0.18
BDF1YLR399C GSY2P27472 705 aa13.95□□□□□ -0.18
BDF1YLR399C VID28P40547 921 aa13.95□□□□□ -0.18
BDF1YLR399C BBC1P47068 1157 aa13.95□□□□□ -0.18
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms