RNA–Protein interactions for RNA: YBR127C

VMA2, Transcript of Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase, yeastyeast

Gene VMA2, Length 1,554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA2YBR127C NPA3P47122 385 aa7.33□□□□□ -1.24
VMA2YBR127C YJR142WP47173 342 aa7.33□□□□□ -1.24
VMA2YBR127C PRP31P49704 494 aaPredicted RBP7.33□□□□□ -1.24
VMA2YBR127C ADE12P80210 433 aaKnown RBP7.33□□□□□ -1.24
VMA2YBR127C SPO19Q03029 223 aa7.33□□□□□ -1.24
VMA2YBR127C ULS1Q08562 1619 aa7.32□□□□□ -1.24
VMA2YBR127C DAL5P15365 543 aa7.32□□□□□ -1.24
VMA2YBR127C HSP104P31539 908 aaKnown RBP7.32□□□□□ -1.24
VMA2YBR127C RFC5P38251 354 aa7.32□□□□□ -1.24
VMA2YBR127C EXO84P38261 753 aa7.32□□□□□ -1.24
VMA2YBR127C ALD2P47771 506 aa7.32□□□□□ -1.24
VMA2YBR127C HST2P53686 357 aa7.32□□□□□ -1.24
VMA2YBR127C YDR338CQ05497 695 aa7.32□□□□□ -1.24
VMA2YBR127C HAP1P0CE41 1502 aa7.32□□□□□ -1.24
VMA2YBR127C SNF2P22082 1703 aa7.31□□□□□ -1.24
VMA2YBR127C YML133CQ03099 1374 aa7.31□□□□□ -1.24
VMA2YBR127C YLL067CQ07888 1374 aa7.31□□□□□ -1.24
VMA2YBR127C YLL066CQ99208 1374 aa7.31□□□□□ -1.24
VMA2YBR127C HST1P53685 503 aa7.31□□□□□ -1.24
VMA2YBR127C TIM11P81449 96 aaPredicted RBP7.31□□□□□ -1.24
VMA2YBR127C SPR3P41901 512 aa7.3□□□□□ -1.24
VMA2YBR127C IST1P53843 298 aaPredicted RBP7.3□□□□□ -1.24
VMA2YBR127C VMS1Q04311 632 aaKnown RBP7.3□□□□□ -1.24
VMA2YBR127C MSB4Q12317 492 aa7.3□□□□□ -1.24
VMA2YBR127C TAF13P11747 167 aa7.29□□□□□ -1.24
VMA2YBR127C THR4P16120 514 aaKnown RBP7.29□□□□□ -1.24
VMA2YBR127C MFT1P33441 392 aaKnown RBP7.29□□□□□ -1.24
VMA2YBR127C ERC1P38767 581 aa7.29□□□□□ -1.24
VMA2YBR127C BRL1P38770 471 aa7.29□□□□□ -1.24
VMA2YBR127C YFR006WP43590 535 aa7.29□□□□□ -1.24
VMA2YBR127C SSL2Q00578 843 aa7.29□□□□□ -1.24
VMA2YBR127C HRQ1Q05549 1077 aa7.29□□□□□ -1.24
VMA2YBR127C CLF1Q12309 687 aaPredicted RBP7.29□□□□□ -1.24
VMA2YBR127C CDC3P32457 520 aaKnown RBP7.29□□□□□ -1.24
VMA2YBR127C MRPL10P36520 322 aa7.29□□□□□ -1.24
VMA2YBR127C YIL092WP40497 633 aa7.29□□□□□ -1.24
VMA2YBR127C HYR1P40581 163 aaKnown RBP7.29□□□□□ -1.24
VMA2YBR127C SUM1P46676 1062 aa7.29□□□□□ -1.24
VMA2YBR127C SHE4P51534 789 aa7.29□□□□□ -1.24
VMA2YBR127C ORM1P53224 222 aa7.29□□□□□ -1.24
VMA2YBR127C CUS1Q02554 436 aaPredicted RBP7.29□□□□□ -1.24
VMA2YBR127C YDR341CQ05506 607 aaKnown RBP7.29□□□□□ -1.24
VMA2YBR127C SLX4Q12098 748 aa7.29□□□□□ -1.24
VMA2YBR127C PSK1P31374 1356 aa7.28□□□□□ -1.24
VMA2YBR127C RAV1P47104 1357 aa7.28□□□□□ -1.24
VMA2YBR127C ARD1P07347 238 aaPredicted RBP7.28□□□□□ -1.24
VMA2YBR127C SKI2P35207 1287 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
VMA2YBR127C RGD1P38339 666 aa7.28□□□□□ -1.24
VMA2YBR127C TAF1P46677 1066 aa7.28□□□□□ -1.24
VMA2YBR127C CWH41P53008 833 aa7.28□□□□□ -1.24
VMA2YBR127C UTP4Q06679 776 aaKnown RBP7.28□□□□□ -1.24
VMA2YBR127C CMS1Q07897 291 aaKnown RBP7.28□□□□□ -1.24
VMA2YBR127C KEX1P09620 729 aa7.27□□□□□ -1.25
VMA2YBR127C YEF3P16521 1044 aaKnown RBP7.27□□□□□ -1.25
VMA2YBR127C KAR9P32526 644 aa7.27□□□□□ -1.25
VMA2YBR127C TIF3P34167 436 aaKnown RBP7.27□□□□□ -1.25
VMA2YBR127C HEL1P36113 551 aa7.27□□□□□ -1.25
VMA2YBR127C YIR042CP40586 236 aa7.27□□□□□ -1.25
VMA2YBR127C RTF1P53064 558 aa7.27□□□□□ -1.25
VMA2YBR127C FMP30Q02883 468 aa7.27□□□□□ -1.25
VMA2YBR127C YML119WQ03208 357 aa7.27□□□□□ -1.25
VMA2YBR127C KRE28Q04431 385 aa7.27□□□□□ -1.25
VMA2YBR127C ABP140Q08641 628 aaKnown RBP7.27□□□□□ -1.25
VMA2YBR127C EFB1P32471 206 aaKnown RBP7.26□□□□□ -1.25
VMA2YBR127C VID28P40547 921 aa7.26□□□□□ -1.25
VMA2YBR127C PUF6Q04373 656 aaKnown RBP7.26□□□□□ -1.25
VMA2YBR127C COG4Q06096 861 aa7.26□□□□□ -1.25
VMA2YBR127C APC11Q12157 165 aa7.26□□□□□ -1.25
VMA2YBR127C DRS2P39524 1355 aa7.26□□□□□ -1.25
VMA2YBR127C TRL1P09880 827 aaKnown RBP7.25□□□□□ -1.25
VMA2YBR127C PET123P17558 318 aa7.25□□□□□ -1.25
VMA2YBR127C CSE1P33307 960 aa7.25□□□□□ -1.25
VMA2YBR127C SRL3P36167 246 aa7.25□□□□□ -1.25
VMA2YBR127C RSM25P40496 264 aa7.25□□□□□ -1.25
VMA2YBR127C WHI5Q12416 295 aa7.25□□□□□ -1.25
VMA2YBR127C PDR18P53756 1333 aa7.25□□□□□ -1.25
VMA2YBR127C PET100P38958 111 aa7.25□□□□□ -1.25
VMA2YBR127C RIX7Q07844 837 aaKnown RBP7.25□□□□□ -1.25
VMA2YBR127C KRS1P15180 591 aaKnown RBP7.24□□□□□ -1.25
VMA2YBR127C SEC20P28791 383 aa7.24□□□□□ -1.25
VMA2YBR127C SEC66P33754 206 aa7.24□□□□□ -1.25
VMA2YBR127C SLD2P34252 453 aa7.24□□□□□ -1.25
VMA2YBR127C KDX1P36005 433 aa7.24□□□□□ -1.25
VMA2YBR127C SHC1P39000 512 aa7.24□□□□□ -1.25
VMA2YBR127C ALD4P46367 519 aaKnown RBP7.24□□□□□ -1.25
VMA2YBR127C TPO2P53283 614 aa7.24□□□□□ -1.25
VMA2YBR127C YPR172WQ06608 200 aa7.24□□□□□ -1.25
VMA2YBR127C ATG9Q12142 997 aa7.24□□□□□ -1.25
VMA2YBR127C APC2Q12440 853 aa7.24□□□□□ -1.25
VMA2YBR127C CDC37P06101 506 aaKnown RBP7.23□□□□□ -1.25
VMA2YBR127C STE11P23561 717 aa7.23□□□□□ -1.25
VMA2YBR127C CDC10P25342 322 aaKnown RBP7.23□□□□□ -1.25
VMA2YBR127C BUD14P27637 709 aa7.23□□□□□ -1.25
VMA2YBR127C DID4P36108 232 aa7.23□□□□□ -1.25
VMA2YBR127C EFM2P38347 419 aa7.23□□□□□ -1.25
VMA2YBR127C VPS20Q04272 221 aa7.23□□□□□ -1.25
VMA2YBR127C LCB5Q06147 687 aaKnown RBP7.23□□□□□ -1.25
VMA2YBR127C RRP9Q06506 573 aaKnown RBP7.23□□□□□ -1.25
VMA2YBR127C SAC3P46674 1301 aa7.22□□□□□ -1.25
VMA2YBR127C RRP1P35178 278 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms