RNA–Protein interactions for RNA: YBR127C

VMA2, Transcript of Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase, yeastyeast

Gene VMA2, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA2YBR127C BFR2Q06631 534 aaKnown RBP10.34□□□□□ -0.75
VMA2YBR127C RQC2Q12532 1038 aaKnown RBP10.07□□□□□ -0.8
VMA2YBR127C NOP2P40991 618 aaKnown RBP9.63□□□□□ -0.87
VMA2YBR127C EBP2P36049 427 aaKnown RBP9.38□□□□□ -0.91
VMA2YBR127C URN1Q06525 465 aaKnown RBP9.35□□□□□ -0.91
VMA2YBR127C NSR1P27476 414 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
VMA2YBR127C CAB3P36076 571 aa9.29□□□□□ -0.92
VMA2YBR127C SIS2P36024 562 aa9.18□□□□□ -0.94
VMA2YBR127C SKI3P17883 1432 aaKnown RBP9.1□□□□□ -0.95
VMA2YBR127C SPA2P23201 1466 aaKnown RBP9.08□□□□□ -0.96
VMA2YBR127C YPR148CQ06523 435 aa8.99□□□□□ -0.97
VMA2YBR127C SSN2P38931 1420 aa8.84□□□□□ -0.99
VMA2YBR127C TAF7Q05021 590 aa8.84□□□□□ -0.99
VMA2YBR127C AVT3P36062 692 aa8.8□□□□□ -1
VMA2YBR127C YFR016CP43597 1233 aaKnown RBP8.79□□□□□ -1
VMA2YBR127C SGS1P35187 1447 aa8.69□□□□□ -1.02
VMA2YBR127C TCB3Q03640 1545 aaKnown RBP8.68□□□□□ -1.02
VMA2YBR127C TCB2P48231 1178 aa8.65□□□□□ -1.03
VMA2YBR127C ENP1P38333 483 aaKnown RBP8.64□□□□□ -1.03
VMA2YBR127C RPS0BP46654 252 aaKnown RBP8.63□□□□□ -1.03
VMA2YBR127C RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
VMA2YBR127C CWC22P53333 577 aaKnown RBP8.52□□□□□ -1.05
VMA2YBR127C STH1P32597 1359 aa8.51□□□□□ -1.05
VMA2YBR127C DRS1P32892 752 aaKnown RBP8.48□□□□□ -1.05
VMA2YBR127C CHD1P32657 1468 aa8.45□□□□□ -1.06
VMA2YBR127C DIP2Q12220 943 aaPredicted RBP8.44□□□□□ -1.06
VMA2YBR127C CLC1P17891 233 aa8.44□□□□□ -1.06
VMA2YBR127C IME2P32581 645 aa8.44□□□□□ -1.06
VMA2YBR127C TFA1P36100 482 aa8.44□□□□□ -1.06
VMA2YBR127C KRI1P42846 591 aaKnown RBP8.43□□□□□ -1.06
VMA2YBR127C SEC3P33332 1336 aaKnown RBP8.41□□□□□ -1.06
VMA2YBR127C UFD4P33202 1483 aa8.41□□□□□ -1.06
VMA2YBR127C MMS22Q06164 1454 aa8.4□□□□□ -1.06
VMA2YBR127C PRS1P32895 427 aaKnown RBP8.39□□□□□ -1.07
VMA2YBR127C RLF2Q12495 606 aa8.39□□□□□ -1.07
VMA2YBR127C NOP53Q12080 455 aaKnown RBP8.38□□□□□ -1.07
VMA2YBR127C ENV11P53246 860 aa8.37□□□□□ -1.07
VMA2YBR127C LEO1P38439 464 aa8.36□□□□□ -1.07
VMA2YBR127C YRB30P53107 440 aaPredicted RBP8.35□□□□□ -1.07
VMA2YBR127C MNN4P36044 1178 aa8.35□□□□□ -1.07
VMA2YBR127C NUG1P40010 520 aaKnown RBP8.34□□□□□ -1.07
VMA2YBR127C YGR130CP53278 816 aa8.34□□□□□ -1.07
VMA2YBR127C SPT7P35177 1332 aa8.34□□□□□ -1.08
VMA2YBR127C ECM5Q03214 1411 aa8.33□□□□□ -1.08
VMA2YBR127C OPY1P38271 328 aa8.31□□□□□ -1.08
VMA2YBR127C MON2P48563 1636 aaPredicted RBP8.3□□□□□ -1.08
VMA2YBR127C XRN1P22147 1528 aaKnown RBP8.29□□□□□ -1.08
VMA2YBR127C QCR6P00127 147 aa8.29□□□□□ -1.08
VMA2YBR127C SPP41P38904 1435 aa8.29□□□□□ -1.08
VMA2YBR127C AIM44Q99299 758 aa8.28□□□□□ -1.08
VMA2YBR127C SPT21P35209 758 aa8.27□□□□□ -1.09
VMA2YBR127C FPR3P38911 411 aaKnown RBP8.27□□□□□ -1.09
VMA2YBR127C DEF1P35732 738 aaKnown RBP8.26□□□□□ -1.09
VMA2YBR127C POL5P39985 1022 aaKnown RBP8.22□□□□□ -1.09
VMA2YBR127C CFT1Q06632 1357 aaKnown RBP8.2□□□□□ -1.1
VMA2YBR127C TRM732Q03496 1420 aa8.19□□□□□ -1.1
VMA2YBR127C PEP1P32319 1579 aa8.19□□□□□ -1.1
VMA2YBR127C MTC1P47018 478 aaKnown RBP8.18□□□□□ -1.1
VMA2YBR127C INO80P53115 1489 aa8.16□□□□□ -1.1
VMA2YBR127C SNF7P39929 240 aaKnown RBP8.15□□□□□ -1.1
VMA2YBR127C FPR4Q06205 392 aaPredicted RBP8.14□□□□□ -1.11
VMA2YBR127C IKI3Q06706 1349 aaKnown RBP8.13□□□□□ -1.11
VMA2YBR127C YTA7P40340 1379 aa8.12□□□□□ -1.11
VMA2YBR127C SRB8P25648 1427 aa8.11□□□□□ -1.11
VMA2YBR127C SPC110P32380 944 aa8.11□□□□□ -1.11
VMA2YBR127C EAF7P53911 425 aaKnown RBP8.11□□□□□ -1.11
VMA2YBR127C RIX1P38883 763 aaPredicted RBP8.1□□□□□ -1.11
VMA2YBR127C TOP2P06786 1428 aaKnown RBP8.09□□□□□ -1.11
VMA2YBR127C RPC31P17890 251 aa8.09□□□□□ -1.11
VMA2YBR127C PAF1P38351 445 aa8.08□□□□□ -1.12
VMA2YBR127C BUD4P47136 1447 aa8.08□□□□□ -1.12
VMA2YBR127C SPT2P06843 333 aaPredicted RBP8.07□□□□□ -1.12
VMA2YBR127C RNA1P11745 407 aaKnown RBP8.07□□□□□ -1.12
VMA2YBR127C PLP2Q12017 286 aa8.06□□□□□ -1.12
VMA2YBR127C PSH1Q12161 406 aa8.06□□□□□ -1.12
VMA2YBR127C YLR419WQ06698 1435 aaKnown RBP8.06□□□□□ -1.12
VMA2YBR127C IOC4Q04213 475 aa8.05□□□□□ -1.12
VMA2YBR127C ROX1P25042 368 aa8.05□□□□□ -1.12
VMA2YBR127C VPS4P52917 437 aa8.04□□□□□ -1.12
VMA2YBR127C NUP170P38181 1502 aa8.03□□□□□ -1.12
VMA2YBR127C PDR10P51533 1564 aa8.03□□□□□ -1.12
VMA2YBR127C SSM4P40318 1319 aa8.02□□□□□ -1.13
VMA2YBR127C NAP1P25293 417 aaKnown RBP8.02□□□□□ -1.13
VMA2YBR127C NMD2P38798 1089 aaKnown RBP8.02□□□□□ -1.13
VMA2YBR127C SAS10Q12136 610 aaPredicted RBP8.02□□□□□ -1.13
VMA2YBR127C HSP82P02829 709 aaKnown RBP8.01□□□□□ -1.13
VMA2YBR127C CTR9P89105 1077 aa8.01□□□□□ -1.13
VMA2YBR127C MMS1Q06211 1407 aa8□□□□□ -1.13
VMA2YBR127C SLN1P39928 1220 aaPredicted RBP7.99□□□□□ -1.13
VMA2YBR127C YIR014WP40570 242 aa7.99□□□□□ -1.13
VMA2YBR127C YNL011CP53980 444 aa7.99□□□□□ -1.13
VMA2YBR127C SIC1P38634 284 aa7.97□□□□□ -1.13
VMA2YBR127C FUN12P39730 1002 aaKnown RBP7.97□□□□□ -1.13
VMA2YBR127C RAD26P40352 1085 aa7.97□□□□□ -1.13
VMA2YBR127C PIL1P53252 339 aaKnown RBP7.97□□□□□ -1.13
VMA2YBR127C NOP58Q12499 511 aaKnown RBP7.97□□□□□ -1.13
VMA2YBR127C YPK9Q12697 1472 aa7.97□□□□□ -1.13
VMA2YBR127C MYO4P32492 1471 aa7.96□□□□□ -1.14
VMA2YBR127C THO2P53552 1597 aaKnown RBP7.94□□□□□ -1.14
VMA2YBR127C SMC3P47037 1230 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms