RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C CTR2P38865 189 aa2.32□□□□□ -2.04
RRI1YDL216C AYR1P40471 297 aa2.32□□□□□ -2.04
RRI1YDL216C HAM1P47119 197 aaKnown RBP2.32□□□□□ -2.04
RRI1YDL216C YNL134CP53912 376 aaKnown RBP2.32□□□□□ -2.04
RRI1YDL216C HTL1Q9URQ5 78 aa2.32□□□□□ -2.04
RRI1YDL216C TY1B-DR3Q99231 1755 aa2.32□□□□□ -2.04
RRI1YDL216C RPO21P04050 1733 aaKnown RBP2.31□□□□□ -2.04
RRI1YDL216C RPL9AP05738 191 aaKnown RBP2.31□□□□□ -2.04
RRI1YDL216C PEX4P29340 183 aa2.31□□□□□ -2.04
RRI1YDL216C MDH3P32419 343 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RRI1YDL216C VMA11P32842 164 aa2.31□□□□□ -2.04
RRI1YDL216C HOC1P47124 396 aa2.31□□□□□ -2.04
RRI1YDL216C ILM1P47155 203 aa2.31□□□□□ -2.04
RRI1YDL216C RPL9BP51401 191 aaKnown RBP2.31□□□□□ -2.04
RRI1YDL216C SRL4Q03085 281 aa2.31□□□□□ -2.04
RRI1YDL216C ATO3Q12359 275 aa2.31□□□□□ -2.04
RRI1YDL216C ATG31Q12421 196 aa2.31□□□□□ -2.04
RRI1YDL216C ERD2P18414 219 aa2.3□□□□□ -2.04
RRI1YDL216C YPT52P36018 234 aaKnown RBP2.3□□□□□ -2.04
RRI1YDL216C YMR144WP40214 342 aaKnown RBP2.3□□□□□ -2.04
RRI1YDL216C YFR054CP43622 192 aa2.3□□□□□ -2.04
RRI1YDL216C YJR056CP47115 236 aa2.3□□□□□ -2.04
RRI1YDL216C ULS1Q08562 1619 aa2.3□□□□□ -2.04
RRI1YDL216C SIR4P11978 1358 aa2.29□□□□□ -2.04
RRI1YDL216C SIN3P22579 1536 aa2.29□□□□□ -2.04
RRI1YDL216C TCP1P12612 559 aaKnown RBP2.29□□□□□ -2.04
RRI1YDL216C SNA3P14359 133 aa2.29□□□□□ -2.04
RRI1YDL216C SCL1P21243 252 aaKnown RBP2.29□□□□□ -2.04
RRI1YDL216C YGR219WP53307 113 aa2.29□□□□□ -2.04
RRI1YDL216C MRPS8Q03799 155 aa2.29□□□□□ -2.04
RRI1YDL216C ATG39Q06159 398 aa2.29□□□□□ -2.04
RRI1YDL216C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
RRI1YDL216C YOR020W-AQ3E824 90 aa2.29□□□□□ -2.04
RRI1YDL216C TY1B-JR2P47100 1755 aaKnown RBP2.29□□□□□ -2.04
RRI1YDL216C TY1B-ER2Q03619 1755 aa2.29□□□□□ -2.04
RRI1YDL216C TY1B-MR1Q04214 1755 aa2.29□□□□□ -2.04
RRI1YDL216C TY1B-MR2Q04670 1755 aaKnown RBP2.29□□□□□ -2.04
RRI1YDL216C TY1B-LR1Q12088 1755 aaKnown RBP2.29□□□□□ -2.04
RRI1YDL216C TY1B-NL1Q12112 1755 aa2.29□□□□□ -2.04
RRI1YDL216C TY1B-GR1Q12141 1755 aa2.29□□□□□ -2.04
RRI1YDL216C TY1B-BLQ12490 1755 aa2.29□□□□□ -2.04
RRI1YDL216C SCC2Q04002 1493 aa2.29□□□□□ -2.04
RRI1YDL216C YPK9Q12697 1472 aa2.29□□□□□ -2.04
RRI1YDL216C PEP8P40335 379 aa2.28□□□□□ -2.04
RRI1YDL216C FMC1P40491 155 aa2.28□□□□□ -2.04
RRI1YDL216C CIS3P47001 227 aa2.28□□□□□ -2.04
RRI1YDL216C NUP159P40477 1460 aa2.28□□□□□ -2.04
RRI1YDL216C BEM2P39960 2167 aaKnown RBP2.28□□□□□ -2.04
RRI1YDL216C TRM732Q03496 1420 aa2.27□□□□□ -2.05
RRI1YDL216C MSW1P04803 379 aa2.27□□□□□ -2.05
RRI1YDL216C RPF1P38805 295 aaKnown RBP2.27□□□□□ -2.05
RRI1YDL216C YAR068WP39564 161 aa2.27□□□□□ -2.05
RRI1YDL216C RSM25P40496 264 aa2.27□□□□□ -2.05
RRI1YDL216C ERG25P53045 309 aa2.27□□□□□ -2.05
RRI1YDL216C RRN5Q02983 363 aa2.27□□□□□ -2.05
RRI1YDL216C YLR126CQ12288 251 aa2.27□□□□□ -2.05
RRI1YDL216C CHC1P22137 1653 aaKnown RBP2.26□□□□□ -2.05
RRI1YDL216C MLP2P40457 1679 aa2.26□□□□□ -2.05
RRI1YDL216C GRX2P17695 143 aaKnown RBP2.26□□□□□ -2.05
RRI1YDL216C PHO88P38264 188 aaPredicted RBP2.26□□□□□ -2.05
RRI1YDL216C LSM4P40070 187 aaKnown RBP2.26□□□□□ -2.05
RRI1YDL216C CAT5P41735 233 aa2.26□□□□□ -2.05
RRI1YDL216C RPA43P46669 326 aa2.26□□□□□ -2.05
RRI1YDL216C NIP7Q08962 181 aaKnown RBP2.26□□□□□ -2.05
RRI1YDL216C RAS2P01120 322 aaKnown RBP2.25□□□□□ -2.05
RRI1YDL216C MRPL25P23369 157 aa2.25□□□□□ -2.05
RRI1YDL216C NUP84P52891 726 aa2.25□□□□□ -2.05
RRI1YDL216C SSQ1Q05931 657 aaPredicted RBP2.25□□□□□ -2.05
RRI1YDL216C NEJ1Q06148 342 aa2.25□□□□□ -2.05
RRI1YDL216C MSA1Q08471 629 aa2.25□□□□□ -2.05
RRI1YDL216C USB1Q12208 290 aaKnown RBP2.25□□□□□ -2.05
RRI1YDL216C ARO1P08566 1588 aaKnown RBP2.24□□□□□ -2.05
RRI1YDL216C RPS5P26783 225 aaKnown RBP2.24□□□□□ -2.05
RRI1YDL216C OAC1P32332 324 aa2.24□□□□□ -2.05
RRI1YDL216C ERV15P38312 142 aa2.24□□□□□ -2.05
RRI1YDL216C CUE1P38428 203 aa2.24□□□□□ -2.05
RRI1YDL216C YKE4P40544 346 aa2.24□□□□□ -2.05
RRI1YDL216C YIL001WP40560 513 aa2.24□□□□□ -2.05
RRI1YDL216C MCM22P47167 239 aa2.24□□□□□ -2.05
RRI1YDL216C ABF2Q02486 183 aa2.24□□□□□ -2.05
RRI1YDL216C ARR2Q06597 130 aa2.24□□□□□ -2.05
RRI1YDL216C FCY2P17064 533 aa2.23□□□□□ -2.05
RRI1YDL216C BMT5P40493 336 aa2.23□□□□□ -2.05
RRI1YDL216C PET117Q02771 107 aa2.23□□□□□ -2.05
RRI1YDL216C YML108WQ03759 105 aa2.23□□□□□ -2.05
RRI1YDL216C YML096WQ04489 525 aa2.23□□□□□ -2.05
RRI1YDL216C YLR283WQ05867 314 aa2.23□□□□□ -2.05
RRI1YDL216C HEM25Q07534 307 aa2.23□□□□□ -2.05
RRI1YDL216C TPO4Q12256 659 aa2.23□□□□□ -2.05
RRI1YDL216C YPL229WQ99395 206 aa2.23□□□□□ -2.05
RRI1YDL216C CDC7P06243 507 aa2.22□□□□□ -2.05
RRI1YDL216C RPO26P20435 155 aa2.22□□□□□ -2.05
RRI1YDL216C SRB4P32569 687 aa2.22□□□□□ -2.05
RRI1YDL216C RIB1P38066 345 aa2.22□□□□□ -2.05
RRI1YDL216C LDB7P38210 180 aa2.22□□□□□ -2.05
RRI1YDL216C ECM33P38248 429 aaKnown RBP2.22□□□□□ -2.05
RRI1YDL216C VTC1P40046 129 aaRIP-Chip data2.22□□□□□ -2.05not detected
RRI1YDL216C MMS22Q06164 1454 aa2.22□□□□□ -2.05
RRI1YDL216C MDH2P22133 377 aa2.21□□□□□ -2.06
RRI1YDL216C YCR016WP25617 290 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms