Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeastyeast

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA11P32842 YML009W-BYML009W-B 477 nt16.95■□□□□ 0.3
VMA11P32842 NSR1YGR159C 1245 nt16.72■□□□□ 0.27
VMA11P32842 NOP1YDL014W 984 nt16.57■□□□□ 0.24
VMA11P32842 YKL036CYKL036C 393 nt15.45■□□□□ 0.06
VMA11P32842 MDJ1YFL016C 1536 nt14.65□□□□□ -0.06
VMA11P32842 Q0297Q0297 156 nt14.57□□□□□ -0.08
VMA11P32842 SRX1YKL086W 384 nt14.49□□□□□ -0.09
VMA11P32842 YJL027CYJL027C 417 nt14.44□□□□□ -0.1
VMA11P32842 SCS3YGL126W 1143 nt14.14□□□□□ -0.15
VMA11P32842 YCR051WYCR051W 669 nt13.73□□□□□ -0.21
VMA11P32842 YOL085CYOL085C 342 nt13.38□□□□□ -0.27
VMA11P32842 PKP1YIL042C 1185 nt13.14□□□□□ -0.31
VMA11P32842 RPP1BYDL130W 321 nt13.07□□□□□ -0.32
VMA11P32842 DBP2YNL112W 1641 nt13.06□□□□□ -0.32
VMA11P32842 TRN1tP(UGG)A 72 nt12.99□□□□□ -0.33
VMA11P32842 SUF9tP(UGG)F 72 nt12.99□□□□□ -0.33
VMA11P32842 SUF8tP(UGG)H 72 nt12.99□□□□□ -0.33
VMA11P32842 tP(UGG)LtP(UGG)L 72 nt12.99□□□□□ -0.33
VMA11P32842 SUF7tP(UGG)M 72 nt12.99□□□□□ -0.33
VMA11P32842 tP(UGG)N1tP(UGG)N1 72 nt12.99□□□□□ -0.33
VMA11P32842 tP(UGG)N2tP(UGG)N2 72 nt12.99□□□□□ -0.33
VMA11P32842 tP(UGG)O1tP(UGG)O1 72 nt12.99□□□□□ -0.33
VMA11P32842 SUF11tP(UGG)O2 72 nt12.99□□□□□ -0.33
VMA11P32842 CCC1YLR220W 969 nt12.83□□□□□ -0.36
VMA11P32842 SCJ1YMR214W 1134 nt12.78□□□□□ -0.36
VMA11P32842 ATS1YAL020C 1002 nt12.7□□□□□ -0.38
VMA11P32842 YBR190WYBR190W 312 nt12.47□□□□□ -0.41
VMA11P32842 PET122YER153C 765 nt12.45□□□□□ -0.42
VMA11P32842 SCR1SCR1 522 nt12.38□□□□□ -0.43
VMA11P32842 tP(UGG)O3tP(UGG)O3 72 nt12.35□□□□□ -0.43
VMA11P32842 RVS167YDR388W 1449 nt12.3□□□□□ -0.44
VMA11P32842 RTC3YHR087W 336 nt12.18□□□□□ -0.46
VMA11P32842 RRN5YLR141W 1092 nt12.12□□□□□ -0.47
VMA11P32842 YDJ1YNL064C 1230 nt11.95□□□□□ -0.5
VMA11P32842 SHR5YOL110W 714 nt11.93□□□□□ -0.5
VMA11P32842 RSB1YOR049C 1065 nt11.91□□□□□ -0.5
VMA11P32842 YER088W-BYER088W-B 147 nt11.88□□□□□ -0.51
VMA11P32842 SSA3YBL075C 1950 nt11.8□□□□□ -0.52
VMA11P32842 PST2YDR032C 597 nt11.75□□□□□ -0.53
VMA11P32842 GAR1YHR089C 618 nt11.64□□□□□ -0.55
VMA11P32842 DEP1YAL013W 1218 nt11.51□□□□□ -0.57
VMA11P32842 URN1YPR152C 1398 nt11.48□□□□□ -0.57
VMA11P32842 YNL208WYNL208W 600 nt11.37□□□□□ -0.59
VMA11P32842 YKL097CYKL097C 411 nt11.36□□□□□ -0.59
VMA11P32842 RPN10YHR200W 807 nt11.35□□□□□ -0.59
VMA11P32842 OPI9YLR338W 858 nt11.28□□□□□ -0.6
VMA11P32842 TIR1YER011W 765 nt11.25□□□□□ -0.61
VMA11P32842 SHU1YHL006C 453 nt11.22□□□□□ -0.61
VMA11P32842 PUT4YOR348C 1884 nt11.18□□□□□ -0.62
VMA11P32842 SAH1YER043C 1350 nt11.16□□□□□ -0.62
VMA11P32842 SSA1YAL005C 1929 nt11.07□□□□□ -0.64
VMA11P32842 ARE1YCR048W 1833 nt11.03□□□□□ -0.64
VMA11P32842 YAL037C-BYAL037C-B 975 nt10.98□□□□□ -0.65
VMA11P32842 YJR018WYJR018W 363 nt10.97□□□□□ -0.65
VMA11P32842 PUN1YLR414C 792 nt10.96□□□□□ -0.65
VMA11P32842 SRB2YHR041C 633 nt10.92□□□□□ -0.66
VMA11P32842 YOR139CYOR139C 393 nt10.88□□□□□ -0.67
VMA11P32842 YHR049C-AYHR049C-A 297 nt10.87□□□□□ -0.67
VMA11P32842 YJR120WYJR120W 351 nt10.84□□□□□ -0.67
VMA11P32842 POA1YBR022W 534 nt10.84□□□□□ -0.67
VMA11P32842 RPP2BYDR382W 333 nt10.79□□□□□ -0.68
VMA11P32842 PTC2YER089C 1395 nt10.78□□□□□ -0.68
VMA11P32842 WWM1YFL010C 636 nt10.78□□□□□ -0.68
VMA11P32842 YGR021WYGR021W 873 nt10.78□□□□□ -0.68
VMA11P32842 HOM6YJR139C 1080 nt10.75□□□□□ -0.69
VMA11P32842 NPL3YDR432W 1245 nt10.74□□□□□ -0.69
VMA11P32842 MNP1YGL068W 585 nt10.7□□□□□ -0.7
VMA11P32842 BUD23YCR047C 828 nt10.64□□□□□ -0.71
VMA11P32842 NAB2YGL122C 1578 nt10.62□□□□□ -0.71
VMA11P32842 YOL037CYOL037C 354 nt10.62□□□□□ -0.71
VMA11P32842 YFL021C-AYFL021C-A 855 nt10.61□□□□□ -0.71
VMA11P32842 BDH2YAL061W 1254 nt10.61□□□□□ -0.71
VMA11P32842 RKM5YLR137W 1104 nt10.59□□□□□ -0.71
VMA11P32842 INM2YDR287W 879 nt10.57□□□□□ -0.72
VMA11P32842 BSC6YOL137W 1494 nt10.56□□□□□ -0.72
VMA11P32842 DAL1YIR027C 1383 nt10.52□□□□□ -0.72
VMA11P32842 LSM3YLR438C-A 270 nt10.52□□□□□ -0.73
VMA11P32842 FIS1YIL065C 468 nt10.48□□□□□ -0.73
VMA11P32842 FPR4YLR449W 1179 nt10.48□□□□□ -0.73
VMA11P32842 YBL100CYBL100C 315 nt10.47□□□□□ -0.73
VMA11P32842 tM(CAU)CtM(CAU)C 72 nt10.45□□□□□ -0.74
VMA11P32842 IMT4tM(CAU)E 72 nt10.45□□□□□ -0.74
VMA11P32842 IMT3tM(CAU)J3 72 nt10.45□□□□□ -0.74
VMA11P32842 IMT1tM(CAU)O1 72 nt10.45□□□□□ -0.74
VMA11P32842 IMT2tM(CAU)P 72 nt10.45□□□□□ -0.74
VMA11P32842 PHO4YFR034C 939 nt10.41□□□□□ -0.74
VMA11P32842 TRM9YML014W 840 nt10.38□□□□□ -0.75
VMA11P32842 FUN26YAL022C 1554 nt10.36□□□□□ -0.75
VMA11P32842 YLR281CYLR281C 468 nt10.36□□□□□ -0.75
VMA11P32842 PUS2YGL063W 1113 nt10.31□□□□□ -0.76
VMA11P32842 WHI5YOR083W 888 nt10.3□□□□□ -0.76
VMA11P32842 CCT6YDR188W 1641 nt10.27□□□□□ -0.77
VMA11P32842 SUF2tP(AGG)C 72 nt10.17□□□□□ -0.78
VMA11P32842 SUF10tP(AGG)N 72 nt10.17□□□□□ -0.78
VMA11P32842 ALF1YNL148C 765 nt10.17□□□□□ -0.78
VMA11P32842 YLR154C-GYLR154C-G 150 nt10.15□□□□□ -0.78
VMA11P32842 YPS1YLR120C 1710 nt10.15□□□□□ -0.78
VMA11P32842 YDR095CYDR095C 411 nt10.13□□□□□ -0.79
VMA11P32842 DSK2YMR276W 1122 nt10.1□□□□□ -0.79
VMA11P32842 MOT3YMR070W 1473 nt10.1□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms