Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 NSR1YGR159C 1245 nt14.15□□□□□ -0.14
VTC1P40046 YML009W-BYML009W-B 477 nt13.9□□□□□ -0.18
VTC1P40046 NOP1YDL014W 984 nt13.52□□□□□ -0.25
VTC1P40046 MDJ1YFL016C 1536 nt13.15□□□□□ -0.3
VTC1P40046 YKL036CYKL036C 393 nt12.2□□□□□ -0.46
VTC1P40046 YJL027CYJL027C 417 nt12.01□□□□□ -0.49
VTC1P40046 SRX1YKL086W 384 nt11.75□□□□□ -0.53
VTC1P40046 Q0297Q0297 156 nt11.7□□□□□ -0.54
VTC1P40046 SSA3YBL075C 1950 nt11.5□□□□□ -0.57 RIP-Chip
VTC1P40046 DBP2YNL112W 1641 nt11.45□□□□□ -0.58
VTC1P40046 YBR190WYBR190W 312 nt11.32□□□□□ -0.6
VTC1P40046 YCR051WYCR051W 669 nt11.1□□□□□ -0.63
VTC1P40046 RTC3YHR087W 336 nt11□□□□□ -0.65
VTC1P40046 SCS3YGL126W 1143 nt10.91□□□□□ -0.66
VTC1P40046 PUT4YOR348C 1884 nt10.78□□□□□ -0.68 RIP-Chip
VTC1P40046 TRN1tP(UGG)A 72 nt10.75□□□□□ -0.69
VTC1P40046 SUF9tP(UGG)F 72 nt10.75□□□□□ -0.69
VTC1P40046 SUF8tP(UGG)H 72 nt10.75□□□□□ -0.69
VTC1P40046 tP(UGG)LtP(UGG)L 72 nt10.75□□□□□ -0.69
VTC1P40046 SUF7tP(UGG)M 72 nt10.75□□□□□ -0.69
VTC1P40046 tP(UGG)N1tP(UGG)N1 72 nt10.75□□□□□ -0.69
VTC1P40046 tP(UGG)N2tP(UGG)N2 72 nt10.75□□□□□ -0.69
VTC1P40046 tP(UGG)O1tP(UGG)O1 72 nt10.75□□□□□ -0.69
VTC1P40046 SUF11tP(UGG)O2 72 nt10.75□□□□□ -0.69
VTC1P40046 CCC1YLR220W 969 nt10.58□□□□□ -0.72
VTC1P40046 YOL085CYOL085C 342 nt10.53□□□□□ -0.72
VTC1P40046 RVS167YDR388W 1449 nt10.5□□□□□ -0.73
VTC1P40046 RPP1BYDL130W 321 nt10.49□□□□□ -0.73
VTC1P40046 SCJ1YMR214W 1134 nt10.47□□□□□ -0.73
VTC1P40046 ARE1YCR048W 1833 nt10.42□□□□□ -0.74
VTC1P40046 POA1YBR022W 534 nt10.35□□□□□ -0.75
VTC1P40046 PKP1YIL042C 1185 nt10.33□□□□□ -0.76
VTC1P40046 SPT5YML010W 3192 nt10.32□□□□□ -0.76
VTC1P40046 BSC6YOL137W 1494 nt10.27□□□□□ -0.77
VTC1P40046 YHR049C-AYHR049C-A 297 nt10.25□□□□□ -0.77
VTC1P40046 SAH1YER043C 1350 nt10.2□□□□□ -0.78
VTC1P40046 SSA4YER103W 1929 nt10.17□□□□□ -0.78
VTC1P40046 URN1YPR152C 1398 nt10.14□□□□□ -0.79
VTC1P40046 OPI9YLR338W 858 nt10.11□□□□□ -0.79
VTC1P40046 tP(UGG)O3tP(UGG)O3 72 nt10.08□□□□□ -0.8
VTC1P40046 SHR5YOL110W 714 nt10.06□□□□□ -0.8
VTC1P40046 PET122YER153C 765 nt10□□□□□ -0.81
VTC1P40046 DEP1YAL013W 1218 nt9.96□□□□□ -0.82
VTC1P40046 SCR1SCR1 522 nt9.93□□□□□ -0.82
VTC1P40046 BUD23YCR047C 828 nt9.92□□□□□ -0.82
VTC1P40046 BDF1YLR399C 2061 nt9.88□□□□□ -0.83
VTC1P40046 YDJ1YNL064C 1230 nt9.81□□□□□ -0.84
VTC1P40046 RPN10YHR200W 807 nt9.79□□□□□ -0.84
VTC1P40046 PTC2YER089C 1395 nt9.78□□□□□ -0.84
VTC1P40046 PUN1YLR414C 792 nt9.78□□□□□ -0.84
VTC1P40046 TAT1YBR069C 1860 nt9.73□□□□□ -0.85 RIP-Chip
VTC1P40046 YNL208WYNL208W 600 nt9.72□□□□□ -0.85
VTC1P40046 NAB2YGL122C 1578 nt9.71□□□□□ -0.85
VTC1P40046 ATS1YAL020C 1002 nt9.71□□□□□ -0.86
VTC1P40046 RRN5YLR141W 1092 nt9.69□□□□□ -0.86
VTC1P40046 MEP2YNL142W 1500 nt9.69□□□□□ -0.86 RIP-Chip
VTC1P40046 YJR018WYJR018W 363 nt9.62□□□□□ -0.87
VTC1P40046 FIS1YIL065C 468 nt9.61□□□□□ -0.87
VTC1P40046 DCW1YKL046C 1350 nt9.56□□□□□ -0.88
VTC1P40046 GAR1YHR089C 618 nt9.55□□□□□ -0.88
VTC1P40046 PAC11YDR488C 1602 nt9.5□□□□□ -0.89
VTC1P40046 YER088W-BYER088W-B 147 nt9.5□□□□□ -0.89
VTC1P40046 DAL1YIR027C 1383 nt9.49□□□□□ -0.89
VTC1P40046 YPS1YLR120C 1710 nt9.46□□□□□ -0.89
VTC1P40046 YJR120WYJR120W 351 nt9.46□□□□□ -0.9
VTC1P40046 RSB1YOR049C 1065 nt9.45□□□□□ -0.9
VTC1P40046 YBR220CYBR220C 1683 nt9.43□□□□□ -0.9
VTC1P40046 PHO4YFR034C 939 nt9.43□□□□□ -0.9
VTC1P40046 FPR4YLR449W 1179 nt9.41□□□□□ -0.9
VTC1P40046 EMI2YDR516C 1503 nt9.38□□□□□ -0.91
VTC1P40046 YHR165W-AYHR165W-A 312 nt9.34□□□□□ -0.91
VTC1P40046 YDR095CYDR095C 411 nt9.32□□□□□ -0.92
VTC1P40046 INM2YDR287W 879 nt9.32□□□□□ -0.92
VTC1P40046 SDH1YKL148C 1923 nt9.27□□□□□ -0.93
VTC1P40046 YDL221WYDL221W 552 nt9.27□□□□□ -0.93
VTC1P40046 TIR1YER011W 765 nt9.27□□□□□ -0.93
VTC1P40046 YMR090WYMR090W 684 nt9.27□□□□□ -0.93
VTC1P40046 NVJ2YPR091C 2313 nt9.26□□□□□ -0.93 RIP-Chip
VTC1P40046 SSA1YAL005C 1929 nt9.26□□□□□ -0.93
VTC1P40046 RPP2BYDR382W 333 nt9.22□□□□□ -0.93
VTC1P40046 CAC2YML102W 1407 nt9.22□□□□□ -0.93
VTC1P40046 PCH2YBR186W 1695 nt9.21□□□□□ -0.93
VTC1P40046 PTP1YDL230W 1008 nt9.2□□□□□ -0.94
VTC1P40046 GUT2YIL155C 1950 nt9.2□□□□□ -0.94
VTC1P40046 YBL100CYBL100C 315 nt9.17□□□□□ -0.94
VTC1P40046 SCC4YER147C 1875 nt9.11□□□□□ -0.95
VTC1P40046 SEC11YIR022W 504 nt9.11□□□□□ -0.95
VTC1P40046 PIB2YGL023C 1908 nt9.1□□□□□ -0.95
VTC1P40046 RPP2AYOL039W 321 nt9.1□□□□□ -0.95
VTC1P40046 IRC15YPL017C 1500 nt9.1□□□□□ -0.95
VTC1P40046 SRB2YHR041C 633 nt9.07□□□□□ -0.96
VTC1P40046 FUN26YAL022C 1554 nt9.05□□□□□ -0.96
VTC1P40046 GIS3YLR094C 1509 nt9.02□□□□□ -0.97
VTC1P40046 PST2YDR032C 597 nt9.02□□□□□ -0.97
VTC1P40046 BDH2YAL061W 1254 nt9□□□□□ -0.97
VTC1P40046 YSC84YHR016C 1407 nt8.98□□□□□ -0.97
VTC1P40046 ALF1YNL148C 765 nt8.98□□□□□ -0.97
VTC1P40046 YJL225CYJL225C 5277 nt8.97□□□□□ -0.97
VTC1P40046 YHL050CYHL050C 2094 nt8.95□□□□□ -0.98
VTC1P40046 Q0182Q0182 405 nt8.94□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms