RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C YCF1P39109 1515 aaKnown RBP6.87□□□□□ -1.31
LDB19YOR322C SPT5P27692 1063 aaKnown RBP6.87□□□□□ -1.31
LDB19YOR322C STE5P32917 917 aa6.87□□□□□ -1.31
LDB19YOR322C BDP1P46678 594 aa6.87□□□□□ -1.31
LDB19YOR322C DNM1P54861 757 aa6.87□□□□□ -1.31
LDB19YOR322C HIR3P47171 1648 aa6.87□□□□□ -1.31
LDB19YOR322C RPA190P10964 1664 aaKnown RBP6.87□□□□□ -1.31
LDB19YOR322C CLN1P20437 546 aa6.87□□□□□ -1.31
LDB19YOR322C PTP3P40048 928 aa6.87□□□□□ -1.31
LDB19YOR322C CLB5P30283 435 aa6.86□□□□□ -1.31
LDB19YOR322C BLI1P35727 113 aa6.86□□□□□ -1.31
LDB19YOR322C PRP43P53131 767 aaKnown RBP6.86□□□□□ -1.31
LDB19YOR322C ESF2P53743 316 aaKnown RBP6.86□□□□□ -1.31
LDB19YOR322C COG4Q06096 861 aa6.86□□□□□ -1.31
LDB19YOR322C RUD3Q12234 484 aaKnown RBP6.86□□□□□ -1.31
LDB19YOR322C SGT2Q12118 346 aaKnown RBP6.86□□□□□ -1.31
LDB19YOR322C MPH3P0CE00 602 aa6.85□□□□□ -1.31
LDB19YOR322C UTP4Q06679 776 aaKnown RBP6.85□□□□□ -1.31
LDB19YOR322C APC5Q08683 685 aa6.85□□□□□ -1.31
LDB19YOR322C ACP1P32463 125 aa6.85□□□□□ -1.31
LDB19YOR322C RRN6P32786 894 aa6.84□□□□□ -1.31
LDB19YOR322C ARC19P33204 171 aaKnown RBP6.84□□□□□ -1.31
LDB19YOR322C GPI8P49018 411 aa6.84□□□□□ -1.31
LDB19YOR322C ERV41Q04651 352 aa6.84□□□□□ -1.31
LDB19YOR322C TFB4Q12004 338 aa6.84□□□□□ -1.31
LDB19YOR322C CDC25P04821 1589 aa6.84□□□□□ -1.31
LDB19YOR322C MSH6Q03834 1242 aa6.84□□□□□ -1.32
LDB19YOR322C YOR389WQ08912 624 aa6.84□□□□□ -1.32
LDB19YOR322C PUP2P32379 260 aa6.83□□□□□ -1.32
LDB19YOR322C HSL1P34244 1518 aa6.83□□□□□ -1.32
LDB19YOR322C APL6P46682 809 aa6.83□□□□□ -1.32
LDB19YOR322C SMC3P47037 1230 aa6.83□□□□□ -1.32
LDB19YOR322C YVC1Q12324 675 aa6.83□□□□□ -1.32
LDB19YOR322C WHI5Q12416 295 aa6.83□□□□□ -1.32
LDB19YOR322C TFG1P41895 735 aaPredicted RBP6.83□□□□□ -1.32
LDB19YOR322C YOL057WQ08225 711 aa6.83□□□□□ -1.32
LDB19YOR322C BMS1Q08965 1183 aaKnown RBP6.83□□□□□ -1.32
LDB19YOR322C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
LDB19YOR322C MAK16P10962 306 aaPredicted RBP6.82□□□□□ -1.32
LDB19YOR322C PET123P17558 318 aa6.82□□□□□ -1.32
LDB19YOR322C IES1P43579 692 aa6.82□□□□□ -1.32
LDB19YOR322C GYP7P48365 746 aa6.82□□□□□ -1.32
LDB19YOR322C HUL5P53119 910 aa6.82□□□□□ -1.32
LDB19YOR322C DSL1P53847 754 aa6.82□□□□□ -1.32
LDB19YOR322C RIA1P53893 1110 aa6.82□□□□□ -1.32
LDB19YOR322C MDM1Q01846 1127 aa6.82□□□□□ -1.32
LDB19YOR322C UGA3P26370 528 aa6.81□□□□□ -1.32
LDB19YOR322C PAF1P38351 445 aa6.81□□□□□ -1.32
LDB19YOR322C VHR2P40041 505 aa6.81□□□□□ -1.32
LDB19YOR322C SPO71Q03868 1245 aa6.81□□□□□ -1.32
LDB19YOR322C NKP1Q12493 238 aa6.81□□□□□ -1.32
LDB19YOR322C CDC31P06704 161 aaKnown RBP6.81□□□□□ -1.32
LDB19YOR322C JJJ1P53863 590 aa6.81□□□□□ -1.32
LDB19YOR322C APC2Q12440 853 aa6.81□□□□□ -1.32
LDB19YOR322C BRF1P29056 596 aa6.8□□□□□ -1.32
LDB19YOR322C BEM4P39011 633 aa6.8□□□□□ -1.32
LDB19YOR322C ARR1Q06596 294 aa6.8□□□□□ -1.32
LDB19YOR322C SUB2Q07478 446 aaKnown RBP6.8□□□□□ -1.32
LDB19YOR322C LSP1Q12230 341 aaKnown RBP6.8□□□□□ -1.32
LDB19YOR322C NOP14Q99207 810 aaKnown RBP6.8□□□□□ -1.32
LDB19YOR322C SPT6P23615 1451 aaKnown RBP6.8□□□□□ -1.32
LDB19YOR322C KEX1P09620 729 aa6.79□□□□□ -1.32
LDB19YOR322C TPM1P17536 199 aaKnown RBP6.79□□□□□ -1.32
LDB19YOR322C POL4P25615 582 aa6.79□□□□□ -1.32
LDB19YOR322C PUS1Q12211 544 aaKnown RBP6.79□□□□□ -1.32
LDB19YOR322C PPH3P32345 308 aa6.79□□□□□ -1.32
LDB19YOR322C ATG19P35193 415 aa6.79□□□□□ -1.32
LDB19YOR322C CST6P40535 587 aa6.79□□□□□ -1.32
LDB19YOR322C SRP1Q02821 542 aaKnown RBP6.79□□□□□ -1.32
LDB19YOR322C KDX1P36005 433 aa6.78□□□□□ -1.32
LDB19YOR322C SEN54Q02825 467 aaPredicted RBP6.78□□□□□ -1.32
LDB19YOR322C MPC54Q08550 464 aa6.78□□□□□ -1.32
LDB19YOR322C CYB2P00175 591 aa6.78□□□□□ -1.32
LDB19YOR322C ARB1P40024 610 aaKnown RBP6.78□□□□□ -1.32
LDB19YOR322C MAM1P40065 302 aa6.78□□□□□ -1.32
LDB19YOR322C ITC1P53125 1264 aa6.78□□□□□ -1.32
LDB19YOR322C YGL081WP53156 320 aa6.78□□□□□ -1.32
LDB19YOR322C PHM6Q05637 104 aa6.78□□□□□ -1.32
LDB19YOR322C NDL1Q06568 189 aa6.78□□□□□ -1.32
LDB19YOR322C IRC3Q06683 689 aa6.78□□□□□ -1.32
LDB19YOR322C TRS33Q99394 268 aa6.78□□□□□ -1.32
LDB19YOR322C YOR093CQ12275 1648 aa6.77□□□□□ -1.32
LDB19YOR322C MSM1P22438 575 aa6.77□□□□□ -1.32
LDB19YOR322C YML119WQ03208 357 aa6.77□□□□□ -1.32
LDB19YOR322C PUF6Q04373 656 aaKnown RBP6.77□□□□□ -1.32
LDB19YOR322C ENT2Q05785 613 aa6.77□□□□□ -1.32
LDB19YOR322C KEX2P13134 814 aa6.77□□□□□ -1.33
LDB19YOR322C RTG2P32608 588 aaKnown RBP6.77□□□□□ -1.33
LDB19YOR322C EFM2P38347 419 aa6.77□□□□□ -1.33
LDB19YOR322C RTT105P40063 208 aa6.77□□□□□ -1.33
LDB19YOR322C PEP12P32854 288 aa6.76□□□□□ -1.33
LDB19YOR322C UBP13P38187 747 aa6.76□□□□□ -1.33
LDB19YOR322C SIT1P39980 628 aa6.76□□□□□ -1.33
LDB19YOR322C YNL247WP53852 767 aaKnown RBP6.76□□□□□ -1.33
LDB19YOR322C EAF7P53911 425 aaKnown RBP6.76□□□□□ -1.33
LDB19YOR322C COG8Q04632 607 aa6.76□□□□□ -1.33
LDB19YOR322C ATG26Q06321 1198 aa6.76□□□□□ -1.33
LDB19YOR322C YEF3P16521 1044 aaKnown RBP6.76□□□□□ -1.33
LDB19YOR322C RIM101P33400 625 aa6.76□□□□□ -1.33
LDB19YOR322C HST2P53686 357 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms