RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C RQC2Q12532 1038 aaKnown RBP10.45□□□□□ -0.74
LDB19YOR322C BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
LDB19YOR322C TAF7Q05021 590 aa9.46□□□□□ -0.89
LDB19YOR322C TFA1P36100 482 aa9.17□□□□□ -0.94
LDB19YOR322C URN1Q06525 465 aaKnown RBP9.08□□□□□ -0.96
LDB19YOR322C MON2P48563 1636 aaPredicted RBP9.05□□□□□ -0.96
LDB19YOR322C DRS1P32892 752 aaKnown RBP8.98□□□□□ -0.97
LDB19YOR322C INO80P53115 1489 aa8.66□□□□□ -1.02
LDB19YOR322C SIS2P36024 562 aa8.61□□□□□ -1.03
LDB19YOR322C AVT3P36062 692 aa8.52□□□□□ -1.05
LDB19YOR322C YFR016CP43597 1233 aaKnown RBP8.51□□□□□ -1.05
LDB19YOR322C EBP2P36049 427 aaKnown RBP8.5□□□□□ -1.05
LDB19YOR322C CAB3P36076 571 aa8.45□□□□□ -1.06
LDB19YOR322C RSE1Q04693 1361 aaKnown RBP8.44□□□□□ -1.06
LDB19YOR322C IOC4Q04213 475 aa8.41□□□□□ -1.06
LDB19YOR322C NAP1P25293 417 aaKnown RBP8.39□□□□□ -1.07
LDB19YOR322C DIP2Q12220 943 aaPredicted RBP8.31□□□□□ -1.08
LDB19YOR322C KRI1P42846 591 aaKnown RBP8.3□□□□□ -1.08
LDB19YOR322C DNA2P38859 1522 aa8.29□□□□□ -1.08
LDB19YOR322C LEO1P38439 464 aa8.29□□□□□ -1.08
LDB19YOR322C KOG1P38873 1557 aa8.29□□□□□ -1.08
LDB19YOR322C YRB30P53107 440 aaPredicted RBP8.28□□□□□ -1.08
LDB19YOR322C NOP2P40991 618 aaKnown RBP8.21□□□□□ -1.1
LDB19YOR322C RPS0BP46654 252 aaKnown RBP8.2□□□□□ -1.1
LDB19YOR322C SPA2P23201 1466 aaKnown RBP8.19□□□□□ -1.1
LDB19YOR322C IFH1P39520 1085 aa8.12□□□□□ -1.11
LDB19YOR322C DMA1P38823 416 aa8.1□□□□□ -1.11
LDB19YOR322C CWC22P53333 577 aaKnown RBP8.1□□□□□ -1.11
LDB19YOR322C ORC1P54784 914 aaPredicted RBP8.06□□□□□ -1.12
LDB19YOR322C MIF2P35201 549 aa8□□□□□ -1.13
LDB19YOR322C SNU71P53207 620 aaKnown RBP7.97□□□□□ -1.13
LDB19YOR322C PSH1Q12161 406 aa7.97□□□□□ -1.13
LDB19YOR322C SWR1Q05471 1514 aa7.97□□□□□ -1.13
LDB19YOR322C RLP24Q07915 199 aaKnown RBP7.93□□□□□ -1.14
LDB19YOR322C AIM44Q99299 758 aa7.92□□□□□ -1.14
LDB19YOR322C TOP1P04786 769 aa7.92□□□□□ -1.14
LDB19YOR322C YPR148CQ06523 435 aa7.91□□□□□ -1.14
LDB19YOR322C MNN4P36044 1178 aa7.88□□□□□ -1.15
LDB19YOR322C DEF1P35732 738 aaKnown RBP7.85□□□□□ -1.15
LDB19YOR322C MDG1P53885 366 aa7.82□□□□□ -1.16
LDB19YOR322C ABP1P15891 592 aaKnown RBP7.81□□□□□ -1.16
LDB19YOR322C ENV11P53246 860 aa7.8□□□□□ -1.16
LDB19YOR322C SWE1P32944 819 aa7.72□□□□□ -1.17
LDB19YOR322C ATG36P46983 293 aa7.68□□□□□ -1.18
LDB19YOR322C GIN4Q12263 1142 aa7.66□□□□□ -1.18
LDB19YOR322C NSR1P27476 414 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
LDB19YOR322C TOA1P32773 286 aa7.63□□□□□ -1.19
LDB19YOR322C SUB1P54000 292 aaKnown RBP7.63□□□□□ -1.19
LDB19YOR322C SPT2P06843 333 aaPredicted RBP7.62□□□□□ -1.19
LDB19YOR322C RPN1P38764 993 aaKnown RBP7.59□□□□□ -1.19
LDB19YOR322C NUG1P40010 520 aaKnown RBP7.59□□□□□ -1.19
LDB19YOR322C TPO2P53283 614 aa7.59□□□□□ -1.19
LDB19YOR322C HIF1Q12373 385 aa7.59□□□□□ -1.19
LDB19YOR322C LEU3P08638 886 aa7.58□□□□□ -1.2
LDB19YOR322C SSA1P10591 642 aaKnown RBP7.58□□□□□ -1.2
LDB19YOR322C SSA2P10592 639 aaKnown RBP7.58□□□□□ -1.2
LDB19YOR322C MTC1P47018 478 aaKnown RBP7.58□□□□□ -1.2
LDB19YOR322C DMA2P53924 522 aa7.55□□□□□ -1.2
LDB19YOR322C TY1B-DR4Q07793 1604 aa7.54□□□□□ -1.2
LDB19YOR322C TIF4632P39936 914 aaKnown RBP7.54□□□□□ -1.2
LDB19YOR322C GRX3Q03835 250 aa7.54□□□□□ -1.2
LDB19YOR322C ISW1P38144 1129 aa7.54□□□□□ -1.2
LDB19YOR322C SPT7P35177 1332 aa7.53□□□□□ -1.2
LDB19YOR322C NHA1Q99271 985 aa7.53□□□□□ -1.2
LDB19YOR322C QCR6P00127 147 aa7.52□□□□□ -1.21
LDB19YOR322C RPS0AP32905 252 aaKnown RBP7.5□□□□□ -1.21
LDB19YOR322C BRL1P38770 471 aa7.49□□□□□ -1.21
LDB19YOR322C LAM6Q08001 693 aa7.49□□□□□ -1.21
LDB19YOR322C RLF2Q12495 606 aa7.49□□□□□ -1.21
LDB19YOR322C SPT21P35209 758 aa7.47□□□□□ -1.21
LDB19YOR322C RNA1P11745 407 aaKnown RBP7.46□□□□□ -1.22
LDB19YOR322C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
LDB19YOR322C TLG1Q03322 224 aa7.44□□□□□ -1.22
LDB19YOR322C DAL5P15365 543 aa7.44□□□□□ -1.22
LDB19YOR322C TCB2P48231 1178 aa7.44□□□□□ -1.22
LDB19YOR322C VPS72Q03388 795 aa7.44□□□□□ -1.22
LDB19YOR322C NOP53Q12080 455 aaKnown RBP7.43□□□□□ -1.22
LDB19YOR322C TCB3Q03640 1545 aaKnown RBP7.43□□□□□ -1.22
LDB19YOR322C HSP82P02829 709 aaKnown RBP7.43□□□□□ -1.22
LDB19YOR322C FPR4Q06205 392 aaPredicted RBP7.43□□□□□ -1.22
LDB19YOR322C FUN12P39730 1002 aaKnown RBP7.41□□□□□ -1.22
LDB19YOR322C BRN1P38170 754 aa7.41□□□□□ -1.22
LDB19YOR322C YFR006WP43590 535 aa7.41□□□□□ -1.22
LDB19YOR322C FPR3P38911 411 aaKnown RBP7.4□□□□□ -1.23
LDB19YOR322C TAF13P11747 167 aa7.39□□□□□ -1.23
LDB19YOR322C ENP1P38333 483 aaKnown RBP7.39□□□□□ -1.23
LDB19YOR322C SPT16P32558 1035 aaKnown RBP7.37□□□□□ -1.23
LDB19YOR322C PLP2Q12017 286 aa7.37□□□□□ -1.23
LDB19YOR322C ASF1P32447 279 aa7.37□□□□□ -1.23
LDB19YOR322C OSW7P43611 510 aa7.37□□□□□ -1.23
LDB19YOR322C NOP8Q08287 484 aaPredicted RBP7.36□□□□□ -1.23
LDB19YOR322C MPP10P47083 593 aaKnown RBP7.36□□□□□ -1.23
LDB19YOR322C FAR11P53917 953 aa7.35□□□□□ -1.23
LDB19YOR322C YNL011CP53980 444 aa7.35□□□□□ -1.23
LDB19YOR322C REV3P14284 1504 aa7.35□□□□□ -1.23
LDB19YOR322C YGR130CP53278 816 aa7.35□□□□□ -1.23
LDB19YOR322C SSP1P38871 571 aa7.34□□□□□ -1.24
LDB19YOR322C SAS10Q12136 610 aaPredicted RBP7.34□□□□□ -1.24
LDB19YOR322C MCM1P11746 286 aa7.33□□□□□ -1.24
LDB19YOR322C BUD21Q08492 214 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms