RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C PML39Q03760 334 aa6.49□□□□□ -1.37
VBA1YMR088C TCB3Q03640 1545 aaKnown RBP6.48□□□□□ -1.37
VBA1YMR088C PIM1P36775 1133 aa6.48□□□□□ -1.37
VBA1YMR088C SIC1P38634 284 aa6.48□□□□□ -1.37
VBA1YMR088C NPR3P38742 1146 aa6.48□□□□□ -1.37
VBA1YMR088C MID1P41821 548 aa6.48□□□□□ -1.37
VBA1YMR088C CLF1Q12309 687 aaPredicted RBP6.48□□□□□ -1.37
VBA1YMR088C SUP35P05453 685 aaKnown RBP6.47□□□□□ -1.37
VBA1YMR088C GAL11P19659 1081 aa6.47□□□□□ -1.37
VBA1YMR088C RTG1P32607 177 aa6.47□□□□□ -1.37
VBA1YMR088C SGS1P35187 1447 aa6.47□□□□□ -1.37
VBA1YMR088C TAF1P46677 1066 aa6.47□□□□□ -1.37
VBA1YMR088C CSN12P47130 423 aa6.47□□□□□ -1.37
VBA1YMR088C TY4B-PA0A0B7P3V8 1104 aa6.46□□□□□ -1.37
VBA1YMR088C SEC61P32915 480 aa6.46□□□□□ -1.37
VBA1YMR088C ALD3P54114 506 aa6.46□□□□□ -1.37
VBA1YMR088C GDE1Q02979 1223 aa6.46□□□□□ -1.37
VBA1YMR088C TFB4Q12004 338 aa6.46□□□□□ -1.37
VBA1YMR088C AIR2Q12476 344 aaKnown RBP6.46□□□□□ -1.37
VBA1YMR088C VPS5Q92331 675 aa6.46□□□□□ -1.37
VBA1YMR088C IME2P32581 645 aa6.45□□□□□ -1.38
VBA1YMR088C TFB3Q03290 321 aa6.45□□□□□ -1.38
VBA1YMR088C DPL1Q05567 589 aa6.45□□□□□ -1.38
VBA1YMR088C YPR109WQ06104 294 aa6.45□□□□□ -1.38
VBA1YMR088C RRP15Q06511 250 aaPredicted RBP6.45□□□□□ -1.38
VBA1YMR088C MPC54Q08550 464 aa6.45□□□□□ -1.38
VBA1YMR088C NMD3P38861 518 aaKnown RBP6.45□□□□□ -1.38
VBA1YMR088C SMC3P47037 1230 aa6.45□□□□□ -1.38
VBA1YMR088C YVC1Q12324 675 aa6.45□□□□□ -1.38
VBA1YMR088C RPC82P32349 654 aa6.44□□□□□ -1.38
VBA1YMR088C NIS1P53939 407 aa6.44□□□□□ -1.38
VBA1YMR088C GGA1Q06336 557 aa6.44□□□□□ -1.38
VBA1YMR088C PEX21P50091 288 aa6.43□□□□□ -1.38
VBA1YMR088C NOP58Q12499 511 aaKnown RBP6.43□□□□□ -1.38
VBA1YMR088C KTR1P27810 393 aaKnown RBP6.42□□□□□ -1.38
VBA1YMR088C PAF1P38351 445 aa6.42□□□□□ -1.38
VBA1YMR088C EAF7P53911 425 aaKnown RBP6.42□□□□□ -1.38
VBA1YMR088C TUM1Q08686 304 aaKnown RBP6.42□□□□□ -1.38
VBA1YMR088C YGL081WP53156 320 aa6.42□□□□□ -1.38
VBA1YMR088C RPL5P26321 297 aaKnown RBP6.41□□□□□ -1.38
VBA1YMR088C MPE1P35728 441 aaKnown RBP6.41□□□□□ -1.38
VBA1YMR088C PEX29Q03370 554 aa6.41□□□□□ -1.38
VBA1YMR088C TYW1Q08960 810 aaKnown RBP6.41□□□□□ -1.38
VBA1YMR088C NCR1Q12200 1170 aa6.41□□□□□ -1.38
VBA1YMR088C GLE1Q12315 538 aa6.41□□□□□ -1.38
VBA1YMR088C MFT1P33441 392 aaKnown RBP6.4□□□□□ -1.38
VBA1YMR088C TFG1P41895 735 aaPredicted RBP6.4□□□□□ -1.38
VBA1YMR088C HOS2P53096 452 aaPredicted RBP6.4□□□□□ -1.38
VBA1YMR088C FPK1P53739 893 aa6.4□□□□□ -1.38
VBA1YMR088C CTR9P89105 1077 aa6.4□□□□□ -1.38
VBA1YMR088C ERV41Q04651 352 aa6.4□□□□□ -1.38
VBA1YMR088C HEL2Q05580 639 aaKnown RBP6.4□□□□□ -1.38
VBA1YMR088C OPY1P38271 328 aa6.39□□□□□ -1.39
VBA1YMR088C POL5P39985 1022 aaKnown RBP6.39□□□□□ -1.39
VBA1YMR088C RAD26P40352 1085 aa6.39□□□□□ -1.39
VBA1YMR088C YDL129WQ07555 291 aa6.39□□□□□ -1.39
VBA1YMR088C YOR389WQ08912 624 aa6.39□□□□□ -1.39
VBA1YMR088C NFI1Q12216 726 aa6.39□□□□□ -1.39
VBA1YMR088C HSP42Q12329 375 aa6.39□□□□□ -1.39
VBA1YMR088C PKC1P24583 1151 aa6.39□□□□□ -1.39
VBA1YMR088C BLI1P35727 113 aa6.39□□□□□ -1.39
VBA1YMR088C DSN1P40568 576 aa6.39□□□□□ -1.39
VBA1YMR088C HST2P53686 357 aa6.39□□□□□ -1.39
VBA1YMR088C NMA111P53920 997 aa6.39□□□□□ -1.39
VBA1YMR088C YPR172WQ06608 200 aa6.39□□□□□ -1.39
VBA1YMR088C ISU2Q12056 156 aa6.39□□□□□ -1.39
VBA1YMR088C PUS1Q12211 544 aaKnown RBP6.39□□□□□ -1.39
VBA1YMR088C CLN1P20437 546 aa6.38□□□□□ -1.39
VBA1YMR088C GLN1P32288 370 aaKnown RBP6.38□□□□□ -1.39
VBA1YMR088C SLX8P40072 274 aa6.38□□□□□ -1.39
VBA1YMR088C MRX12P47084 519 aa6.38□□□□□ -1.39
VBA1YMR088C BNI5P53890 448 aaKnown RBP6.38□□□□□ -1.39
VBA1YMR088C UBX5Q06682 500 aa6.38□□□□□ -1.39
VBA1YMR088C YRR1Q12172 810 aa6.38□□□□□ -1.39
VBA1YMR088C SIT4P20604 311 aa6.37□□□□□ -1.39
VBA1YMR088C RPA135P22138 1203 aaKnown RBP6.37□□□□□ -1.39
VBA1YMR088C VPS27P40343 622 aaKnown RBP6.37□□□□□ -1.39
VBA1YMR088C RRB1Q04225 511 aaKnown RBP6.37□□□□□ -1.39
VBA1YMR088C SRP54P20424 541 aaKnown RBP6.36□□□□□ -1.39
VBA1YMR088C OPI1P21957 404 aa6.36□□□□□ -1.39
VBA1YMR088C NOC2P39744 710 aaKnown RBP6.36□□□□□ -1.39
VBA1YMR088C YJL171CP46992 396 aa6.36□□□□□ -1.39
VBA1YMR088C RIA1P53893 1110 aa6.36□□□□□ -1.39
VBA1YMR088C COG8Q04632 607 aa6.36□□□□□ -1.39
VBA1YMR088C LSP1Q12230 341 aaKnown RBP6.36□□□□□ -1.39
VBA1YMR088C MET10P39692 1035 aa6.36□□□□□ -1.39
VBA1YMR088C BOI2P39969 1040 aa6.36□□□□□ -1.39
VBA1YMR088C FAF1P40546 346 aaPredicted RBP6.36□□□□□ -1.39
VBA1YMR088C YNL247WP53852 767 aaKnown RBP6.36□□□□□ -1.39
VBA1YMR088C VTC3Q02725 835 aa6.36□□□□□ -1.39
VBA1YMR088C JIP5Q06214 492 aaPredicted RBP6.36□□□□□ -1.39
VBA1YMR088C RSC2Q06488 889 aa6.36□□□□□ -1.39
VBA1YMR088C RIX7Q07844 837 aaKnown RBP6.36□□□□□ -1.39
VBA1YMR088C MMP1Q12372 583 aa6.36□□□□□ -1.39
VBA1YMR088C SAC3P46674 1301 aa6.35□□□□□ -1.39
VBA1YMR088C SCJ1P25303 377 aa6.35□□□□□ -1.39
VBA1YMR088C TPS3P38426 1054 aaKnown RBP6.35□□□□□ -1.39
VBA1YMR088C ERP2P39704 215 aa6.35□□□□□ -1.39
VBA1YMR088C BNI4P53858 892 aa6.35□□□□□ -1.39
VBA1YMR088C TMA64Q04600 565 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms