RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C DRS1P32892 752 aaKnown RBP11.29□□□□□ -0.6
VBA1YMR088C MTC1P47018 478 aaKnown RBP11.09□□□□□ -0.63
VBA1YMR088C BFR2Q06631 534 aaKnown RBP9.83□□□□□ -0.84
VBA1YMR088C DIP2Q12220 943 aaPredicted RBP9.56□□□□□ -0.88
VBA1YMR088C AVT3P36062 692 aa9.48□□□□□ -0.89
VBA1YMR088C FAP1P53971 965 aa9.46□□□□□ -0.89
VBA1YMR088C RQC2Q12532 1038 aaKnown RBP9.4□□□□□ -0.9
VBA1YMR088C TFA1P36100 482 aa9.36□□□□□ -0.91
VBA1YMR088C ISW2Q08773 1120 aa8.98□□□□□ -0.97
VBA1YMR088C RSE1Q04693 1361 aaKnown RBP8.97□□□□□ -0.97
VBA1YMR088C PRI1P10363 409 aa8.95□□□□□ -0.98
VBA1YMR088C PRY3P47033 881 aa8.9□□□□□ -0.98
VBA1YMR088C AAD16Q02895 342 aa8.87□□□□□ -0.99
VBA1YMR088C RPG1P38249 964 aaKnown RBP8.85□□□□□ -0.99
VBA1YMR088C TAF7Q05021 590 aa8.65□□□□□ -1.03
VBA1YMR088C RPL17AP05740 184 aaKnown RBP8.62□□□□□ -1.03
VBA1YMR088C RPL17BP46990 184 aaKnown RBP8.62□□□□□ -1.03
VBA1YMR088C REB1P21538 810 aa8.5□□□□□ -1.05
VBA1YMR088C YCK3P39962 524 aa8.45□□□□□ -1.06
VBA1YMR088C TSR3Q12094 313 aaKnown RBP8.45□□□□□ -1.06
VBA1YMR088C HAA1Q12753 694 aaKnown RBP8.36□□□□□ -1.07
VBA1YMR088C SPT21P35209 758 aa8.35□□□□□ -1.07
VBA1YMR088C RIM101P33400 625 aa8.26□□□□□ -1.09
VBA1YMR088C URN1Q06525 465 aaKnown RBP8.24□□□□□ -1.09
VBA1YMR088C MRPL32P25348 183 aa8.11□□□□□ -1.11
VBA1YMR088C PTP3P40048 928 aa8.07□□□□□ -1.12
VBA1YMR088C YKR023WP36119 530 aaKnown RBP8.03□□□□□ -1.12
VBA1YMR088C OXP1P28273 1286 aa8.01□□□□□ -1.13
VBA1YMR088C SSP1P38871 571 aa7.95□□□□□ -1.14
VBA1YMR088C YAH1Q12184 172 aaKnown RBP7.89□□□□□ -1.15
VBA1YMR088C YIL055CP40523 627 aaKnown RBP7.88□□□□□ -1.15
VBA1YMR088C HOP09932 586 aa7.87□□□□□ -1.15
VBA1YMR088C SIS2P36024 562 aa7.87□□□□□ -1.15
VBA1YMR088C TFC8Q12308 588 aa7.87□□□□□ -1.15
VBA1YMR088C EBP2P36049 427 aaKnown RBP7.84□□□□□ -1.15
VBA1YMR088C CDC27P38042 758 aa7.83□□□□□ -1.16
VBA1YMR088C CAB3P36076 571 aa7.82□□□□□ -1.16
VBA1YMR088C DCD1P06773 312 aa7.81□□□□□ -1.16
VBA1YMR088C YLR271WQ06152 274 aa7.81□□□□□ -1.16
VBA1YMR088C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
VBA1YMR088C DMA1P38823 416 aa7.77□□□□□ -1.17
VBA1YMR088C YGL015CP33199 130 aa7.76□□□□□ -1.17
VBA1YMR088C RSM7P47150 247 aa7.76□□□□□ -1.17
VBA1YMR088C YRB30P53107 440 aaPredicted RBP7.7□□□□□ -1.18
VBA1YMR088C YFR016CP43597 1233 aaKnown RBP7.68□□□□□ -1.18
VBA1YMR088C MGA2P40578 1113 aa7.66□□□□□ -1.18
VBA1YMR088C NOP2P40991 618 aaKnown RBP7.66□□□□□ -1.18
VBA1YMR088C BCH2P36122 765 aa7.65□□□□□ -1.18
VBA1YMR088C AI2P03876 854 aa7.62□□□□□ -1.19
VBA1YMR088C NAP1P25293 417 aaKnown RBP7.61□□□□□ -1.19
VBA1YMR088C PSD2P53037 1138 aaKnown RBP7.6□□□□□ -1.19
VBA1YMR088C CST9Q06032 482 aa7.59□□□□□ -1.19
VBA1YMR088C RPS0BP46654 252 aaKnown RBP7.57□□□□□ -1.2
VBA1YMR088C BBC1P47068 1157 aa7.55□□□□□ -1.2
VBA1YMR088C EPS1P40557 701 aa7.53□□□□□ -1.2
VBA1YMR088C UBP10P53874 792 aaPredicted RBP7.52□□□□□ -1.21
VBA1YMR088C LEO1P38439 464 aa7.51□□□□□ -1.21
VBA1YMR088C IOC4Q04213 475 aa7.5□□□□□ -1.21
VBA1YMR088C KRI1P42846 591 aaKnown RBP7.49□□□□□ -1.21
VBA1YMR088C MAP2P38174 421 aaKnown RBP7.48□□□□□ -1.21
VBA1YMR088C SCY1P53009 804 aa7.48□□□□□ -1.21
VBA1YMR088C BDF1P35817 686 aa7.47□□□□□ -1.21
VBA1YMR088C AIM44Q99299 758 aa7.47□□□□□ -1.21
VBA1YMR088C MRM1P25270 412 aa7.4□□□□□ -1.23
VBA1YMR088C MNN4P36044 1178 aa7.4□□□□□ -1.23
VBA1YMR088C RAM2P29703 316 aa7.33□□□□□ -1.24
VBA1YMR088C SLX5P32828 619 aaKnown RBP7.33□□□□□ -1.24
VBA1YMR088C RCR1P38212 213 aa7.32□□□□□ -1.24
VBA1YMR088C SAS10Q12136 610 aaPredicted RBP7.32□□□□□ -1.24
VBA1YMR088C RTG3P38165 486 aa7.3□□□□□ -1.24
VBA1YMR088C CWC22P53333 577 aaKnown RBP7.26□□□□□ -1.25
VBA1YMR088C TOP1P04786 769 aa7.25□□□□□ -1.25
VBA1YMR088C SNU71P53207 620 aaKnown RBP7.24□□□□□ -1.25
VBA1YMR088C DEF1P35732 738 aaKnown RBP7.22□□□□□ -1.25
VBA1YMR088C MAK11P20484 414 aaKnown RBP7.21□□□□□ -1.26
VBA1YMR088C VPS29P38759 282 aa7.21□□□□□ -1.26
VBA1YMR088C SET1P38827 1080 aaKnown RBP7.21□□□□□ -1.26
VBA1YMR088C IFH1P39520 1085 aa7.21□□□□□ -1.26
VBA1YMR088C YPR148CQ06523 435 aa7.2□□□□□ -1.26
VBA1YMR088C TIF4632P39936 914 aaKnown RBP7.19□□□□□ -1.26
VBA1YMR088C TGL3P40308 642 aa7.16□□□□□ -1.26
VBA1YMR088C PSH1Q12161 406 aa7.16□□□□□ -1.26
VBA1YMR088C YMR1P47147 688 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
VBA1YMR088C ORC1P54784 914 aaPredicted RBP7.12□□□□□ -1.27
VBA1YMR088C LEU3P08638 886 aa7.12□□□□□ -1.27
VBA1YMR088C STS1P38637 319 aa7.12□□□□□ -1.27
VBA1YMR088C RLP24Q07915 199 aaKnown RBP7.11□□□□□ -1.27
VBA1YMR088C NSR1P27476 414 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
VBA1YMR088C COQ8P27697 501 aa7.09□□□□□ -1.27
VBA1YMR088C DBP1P24784 617 aaKnown RBP7.09□□□□□ -1.27
VBA1YMR088C YOR238WQ08634 303 aa7.09□□□□□ -1.27
VBA1YMR088C BUD31P25337 157 aaPredicted RBP7.08□□□□□ -1.28
VBA1YMR088C YFR006WP43590 535 aa7.08□□□□□ -1.28
VBA1YMR088C VPS70P47161 811 aa7.08□□□□□ -1.28
VBA1YMR088C MDG1P53885 366 aa7.08□□□□□ -1.28
VBA1YMR088C MIF2P35201 549 aa7.05□□□□□ -1.28
VBA1YMR088C YAP5P40574 245 aa7.05□□□□□ -1.28
VBA1YMR088C CKB1P43639 278 aa7.05□□□□□ -1.28
VBA1YMR088C ENV11P53246 860 aa7.05□□□□□ -1.28
VBA1YMR088C NUG1P40010 520 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms