RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C SSM4P40318 1319 aa3.08□□□□□ -1.92
YMR050CYMR050C SNU71P53207 620 aaKnown RBP3.08□□□□□ -1.92
YMR050CYMR050C LSB1P53281 241 aa3.08□□□□□ -1.92
YMR050CYMR050C MNR2P35724 969 aa3.08□□□□□ -1.92
YMR050CYMR050C MPP10P47083 593 aaKnown RBP3.08□□□□□ -1.92
YMR050CYMR050C CEX1Q12453 761 aa3.08□□□□□ -1.92
YMR050CYMR050C BUD3P25558 1636 aa3.08□□□□□ -1.92
YMR050CYMR050C BDP1P46678 594 aa3.08□□□□□ -1.92
YMR050CYMR050C CSM3Q04659 317 aa3.08□□□□□ -1.92
YMR050CYMR050C REV3P14284 1504 aa3.08□□□□□ -1.92
YMR050CYMR050C MDS3P53094 1487 aa3.08□□□□□ -1.92
YMR050CYMR050C PSE1P32337 1089 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C YBL086CP38177 466 aa3.07□□□□□ -1.92
YMR050CYMR050C NOP2P40991 618 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C EAF7P53911 425 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C MNL2Q12205 849 aa3.07□□□□□ -1.92
YMR050CYMR050C CLF1Q12309 687 aaPredicted RBP3.07□□□□□ -1.92
YMR050CYMR050C ITC1P53125 1264 aa3.07□□□□□ -1.92
YMR050CYMR050C MET7Q08645 548 aa3.07□□□□□ -1.92
YMR050CYMR050C TY3A-GQ12173 290 aa3.07□□□□□ -1.92
YMR050CYMR050C TY3A-IQ99219 290 aa3.07□□□□□ -1.92
YMR050CYMR050C LPD1P09624 499 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C MUM2P38236 366 aa3.07□□□□□ -1.92
YMR050CYMR050C PPX1P38698 397 aa3.07□□□□□ -1.92
YMR050CYMR050C IMP4P53941 290 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C GIR2Q03768 265 aaPredicted RBP3.07□□□□□ -1.92
YMR050CYMR050C UFD4P33202 1483 aa3.07□□□□□ -1.92
YMR050CYMR050C PDR11P40550 1411 aa3.07□□□□□ -1.92
YMR050CYMR050C GEA1P47102 1408 aaPredicted RBP3.07□□□□□ -1.92
YMR050CYMR050C MAK16P10962 306 aaPredicted RBP3.07□□□□□ -1.92
YMR050CYMR050C BUD14P27637 709 aa3.07□□□□□ -1.92
YMR050CYMR050C AFG2P32794 780 aa3.07□□□□□ -1.92
YMR050CYMR050C AAP1P37898 856 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C TOM71P38825 639 aaKnown RBP3.07□□□□□ -1.92
YMR050CYMR050C VPS64Q03944 604 aa3.07□□□□□ -1.92
YMR050CYMR050C BRR1Q99177 341 aaPredicted RBP3.07□□□□□ -1.92
YMR050CYMR050C SCC2Q04002 1493 aa3.07□□□□□ -1.92
YMR050CYMR050C EBP2P36049 427 aaKnown RBP3.06□□□□□ -1.92
YMR050CYMR050C FMO1P38866 432 aa3.06□□□□□ -1.92
YMR050CYMR050C ARP7Q12406 477 aa3.06□□□□□ -1.92
YMR050CYMR050C SPP41P38904 1435 aa3.06□□□□□ -1.92
YMR050CYMR050C YOR1P53049 1477 aa3.06□□□□□ -1.92
YMR050CYMR050C YPK9Q12697 1472 aa3.06□□□□□ -1.92
YMR050CYMR050C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
YMR050CYMR050C RRG1Q12167 365 aaPredicted RBP3.06□□□□□ -1.92
YMR050CYMR050C YLL058WQ12198 575 aa3.06□□□□□ -1.92
YMR050CYMR050C SRB8P25648 1427 aa3.06□□□□□ -1.92
YMR050CYMR050C SSA4P22202 642 aaKnown RBP3.06□□□□□ -1.92
YMR050CYMR050C SET1P38827 1080 aaKnown RBP3.06□□□□□ -1.92
YMR050CYMR050C RSM25P40496 264 aa3.06□□□□□ -1.92
YMR050CYMR050C UTP22P53254 1237 aaPredicted RBP3.06□□□□□ -1.92
YMR050CYMR050C COP1P53622 1201 aaKnown RBP3.06□□□□□ -1.92
YMR050CYMR050C YLH47Q06493 454 aa3.06□□□□□ -1.92
YMR050CYMR050C SRS2P12954 1174 aa3.06□□□□□ -1.92
YMR050CYMR050C AFT1P22149 690 aa3.06□□□□□ -1.92
YMR050CYMR050C SPR3P41901 512 aa3.06□□□□□ -1.92
YMR050CYMR050C PUF6Q04373 656 aaKnown RBP3.06□□□□□ -1.92
YMR050CYMR050C PAH1P32567 862 aa3.06□□□□□ -1.92
YMR050CYMR050C IPL1P38991 367 aa3.06□□□□□ -1.92
YMR050CYMR050C FKH1P40466 484 aa3.06□□□□□ -1.92
YMR050CYMR050C SHQ1P40486 507 aaPredicted RBP3.06□□□□□ -1.92
YMR050CYMR050C SIZ1Q04195 904 aa3.06□□□□□ -1.92
YMR050CYMR050C OSH2Q12451 1283 aa3.06□□□□□ -1.92
YMR050CYMR050C ROM2P51862 1356 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C FUS1P11710 512 aa3.05□□□□□ -1.92
YMR050CYMR050C GUA1P38625 525 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C CWC21Q03375 135 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C ETT1Q08421 412 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C SSK2P53599 1579 aa3.05□□□□□ -1.92
YMR050CYMR050C KCC4P25389 1037 aa3.05□□□□□ -1.92
YMR050CYMR050C UGA3P26370 528 aa3.05□□□□□ -1.92
YMR050CYMR050C NMD2P38798 1089 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C EPS1P40557 701 aa3.05□□□□□ -1.92
YMR050CYMR050C PEX14P53112 341 aa3.05□□□□□ -1.92
YMR050CYMR050C YNL050CP53952 270 aa3.05□□□□□ -1.92
YMR050CYMR050C SGD1Q06132 899 aa3.05□□□□□ -1.92
YMR050CYMR050C IRE1P32361 1115 aa3.05□□□□□ -1.92
YMR050CYMR050C LDH1P38139 375 aa3.05□□□□□ -1.92
YMR050CYMR050C VHR2P40041 505 aa3.05□□□□□ -1.92
YMR050CYMR050C XKS1P42826 600 aa3.05□□□□□ -1.92
YMR050CYMR050C ACF4P47129 309 aa3.05□□□□□ -1.92
YMR050CYMR050C ARP5P53946 755 aa3.05□□□□□ -1.92
YMR050CYMR050C RKM4Q12504 494 aa3.05□□□□□ -1.92
YMR050CYMR050C PDR10P51533 1564 aa3.05□□□□□ -1.92
YMR050CYMR050C RTR1P40084 226 aaPredicted RBP3.05□□□□□ -1.92
YMR050CYMR050C PUS4P48567 403 aaKnown RBP3.05□□□□□ -1.92
YMR050CYMR050C YCF1P39109 1515 aaKnown RBP3.04□□□□□ -1.92
YMR050CYMR050C YKU70P32807 602 aa3.04□□□□□ -1.92
YMR050CYMR050C WHI3P34761 661 aaKnown RBP3.04□□□□□ -1.92
YMR050CYMR050C PEX5P35056 612 aa3.04□□□□□ -1.92
YMR050CYMR050C HXT5P38695 592 aa3.04□□□□□ -1.92
YMR050CYMR050C YNR029CP53729 429 aaKnown RBP3.04□□□□□ -1.92
YMR050CYMR050C NST1P53935 1240 aa3.04□□□□□ -1.92
YMR050CYMR050C VPS15P22219 1454 aa3.04□□□□□ -1.92
YMR050CYMR050C SIN3P22579 1536 aa3.04□□□□□ -1.92
YMR050CYMR050C BRN1P38170 754 aa3.04□□□□□ -1.92
YMR050CYMR050C CLB3P24870 427 aa3.04□□□□□ -1.92
YMR050CYMR050C MDL2P33311 773 aa3.04□□□□□ -1.92
YMR050CYMR050C MAM1P40065 302 aa3.04□□□□□ -1.92
YMR050CYMR050C YJR107WP47145 328 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms