RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMR1	YHL035C	ENO1	P00924	437 aa	Known RBP	3.12	□□□□□ -1.91
VMR1	YHL035C	PHO87	P25360	923 aa		3.12	□□□□□ -1.91
VMR1	YHL035C	SPT2	P06843	333 aa	Predicted RBP	3.11	□□□□□ -1.91
VMR1	YHL035C	HAP4	P14064	554 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	CDC3	P32457	520 aa	Known RBP	3.11	□□□□□ -1.91
VMR1	YHL035C	YDL206W	Q12424	762 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	ERF2	Q06551	359 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	YPR015C	Q12531	247 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	PUP1	P25043	261 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	MRT4	P33201	236 aa	Known RBP	3.11	□□□□□ -1.91
VMR1	YHL035C	YNL108C	P53929	270 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	GAS4	Q08271	471 aa		3.11	□□□□□ -1.91
VMR1	YHL035C	TGL4	P36165	910 aa		3.1	□□□□□ -1.91
VMR1	YHL035C	RPP2B	P02400	110 aa	Known RBP	3.1	□□□□□ -1.91
VMR1	YHL035C	NOB1	Q08444	459 aa	Known RBP	3.1	□□□□□ -1.91
VMR1	YHL035C	GAL2	P13181	574 aa		3.1	□□□□□ -1.91
VMR1	YHL035C	GCD11	P32481	527 aa	Known RBP	3.1	□□□□□ -1.91
VMR1	YHL035C	YPR204W	Q08995	1032 aa		3.1	□□□□□ -1.91
VMR1	YHL035C	SPT16	P32558	1035 aa	Known RBP	3.09	□□□□□ -1.91
VMR1	YHL035C	MCM1	P11746	286 aa		3.09	□□□□□ -1.91
VMR1	YHL035C	SLD2	P34252	453 aa		3.09	□□□□□ -1.91
VMR1	YHL035C	EMW1	P42842	904 aa	Known RBP	3.09	□□□□□ -1.91
VMR1	YHL035C	CWC15	Q03772	175 aa	Known RBP	3.09	□□□□□ -1.91
VMR1	YHL035C	YDJ1	P25491	409 aa	Known RBP	3.09	□□□□□ -1.91
VMR1	YHL035C	PAC1	P39946	494 aa	Known RBP	3.09	□□□□□ -1.91
VMR1	YHL035C	SSF1	P38789	453 aa	Predicted RBP	3.08	□□□□□ -1.92
VMR1	YHL035C	SLX8	P40072	274 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	YJL171C	P46992	396 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	TSC13	Q99190	310 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	ASF1	P32447	279 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	ERG12	P07277	443 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	YML020W	Q03722	664 aa		3.08	□□□□□ -1.92
VMR1	YHL035C	EMP47	P43555	445 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	RPL34A	P87262	121 aa	Predicted RBP	3.07	□□□□□ -1.92
VMR1	YHL035C	XDJ1	P39102	459 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	CPS1	P27614	576 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	STM1	P39015	273 aa	Known RBP	3.07	□□□□□ -1.92
VMR1	YHL035C	YEL077C	Q3E7X8	1277 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	SEC20	P28791	383 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	RRN7	P40992	514 aa		3.07	□□□□□ -1.92
VMR1	YHL035C	SYH1	Q02875	849 aa	Known RBP	3.07	□□□□□ -1.92
VMR1	YHL035C	SRS2	P12954	1174 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	STE6	P12866	1290 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	ATG1	P53104	897 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	YDR344C	Q05510	147 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	HEM3	P28789	327 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	HED1	Q03937	162 aa		3.06	□□□□□ -1.92
VMR1	YHL035C	UTP4	Q06679	776 aa	Known RBP	3.06	□□□□□ -1.92
VMR1	YHL035C	SEN54	Q02825	467 aa	Predicted RBP	3.05	□□□□□ -1.92
VMR1	YHL035C	TRS33	Q99394	268 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	BCK2	P33306	851 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	PPX1	P38698	397 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	ACF4	P47129	309 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	GYP1	Q08484	637 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	ENV9	Q08651	330 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	LSO1	Q3E827	93 aa		3.05	□□□□□ -1.92
VMR1	YHL035C	SDH2	P21801	266 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	FBP26	P32604	452 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	NGR1	P32831	672 aa	Known RBP	3.04	□□□□□ -1.92
VMR1	YHL035C	IXR1	P33417	597 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	YBL086C	P38177	466 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	APC11	Q12157	165 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	VTC4	P47075	721 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	ISU1	Q03020	165 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	SVF1	Q05515	481 aa		3.04	□□□□□ -1.92
VMR1	YHL035C	SIS1	P25294	352 aa	Known RBP	3.04	□□□□□ -1.92
VMR1	YHL035C	SPR3	P41901	512 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	ROM1	P53046	1155 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	ATG20	Q07528	640 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	VAN1	P23642	535 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	SOH1	P38633	127 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	MSB3	P48566	633 aa	Predicted RBP	3.03	□□□□□ -1.92
VMR1	YHL035C	AMS1	P22855	1083 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	ACS2	P52910	683 aa	Known RBP	3.03	□□□□□ -1.92
VMR1	YHL035C	YPQ2	Q06328	317 aa		3.03	□□□□□ -1.92
VMR1	YHL035C	SCD5	P34758	872 aa		3.03	□□□□□ -1.93
VMR1	YHL035C	TRL1	P09880	827 aa	Known RBP	3.02	□□□□□ -1.93
VMR1	YHL035C	NAP1	P25293	417 aa	Known RBP	3.02	□□□□□ -1.93
VMR1	YHL035C	CWH41	P53008	833 aa		3.02	□□□□□ -1.93
VMR1	YHL035C	AIM9	P40053	627 aa	Known RBP	3.02	□□□□□ -1.93
VMR1	YHL035C	BDP1	P46678	594 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	MSC6	Q08818	692 aa	Known RBP	3.01	□□□□□ -1.93
VMR1	YHL035C	RRN6	P32786	894 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	VRP1	P37370	817 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	CDC4	P07834	779 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	HAL5	P38970	855 aa	Known RBP	3.01	□□□□□ -1.93
VMR1	YHL035C	MSN5	P52918	1224 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	HDA3	Q06623	655 aa		3.01	□□□□□ -1.93
VMR1	YHL035C	UTR2	P32623	467 aa		3	□□□□□ -1.93
VMR1	YHL035C	YML083C	Q04526	418 aa		3	□□□□□ -1.93
VMR1	YHL035C	ISR1	Q06098	443 aa	Known RBP	3	□□□□□ -1.93
VMR1	YHL035C	RPP1A	P05318	106 aa	Predicted RBP	3	□□□□□ -1.93
VMR1	YHL035C	CYT1	P07143	309 aa		3	□□□□□ -1.93
VMR1	YHL035C	SNU71	P53207	620 aa	Known RBP	3	□□□□□ -1.93
VMR1	YHL035C	AFT1	P22149	690 aa		3	□□□□□ -1.93
VMR1	YHL035C	ECM23	Q02710	187 aa		3	□□□□□ -1.93
VMR1	YHL035C	MKS1	P34072	584 aa		3	□□□□□ -1.93
VMR1	YHL035C	TBS1	P38114	1094 aa		3	□□□□□ -1.93
VMR1	YHL035C	UFD2	P54860	961 aa		3	□□□□□ -1.93
VMR1	YHL035C	PNP1	Q05788	311 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms