RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C IES1P43579 692 aa5.88□□□□□ -1.47
TUP1YCR084C CMP2P14747 604 aa5.87□□□□□ -1.47
TUP1YCR084C SSB1P11484 613 aaKnown RBP5.87□□□□□ -1.47
TUP1YCR084C SSB2P40150 613 aaKnown RBP5.87□□□□□ -1.47
TUP1YCR084C TIM11P81449 96 aaPredicted RBP5.87□□□□□ -1.47
TUP1YCR084C RRP9Q06506 573 aaKnown RBP5.87□□□□□ -1.47
TUP1YCR084C YLL054CQ12244 843 aa5.87□□□□□ -1.47
TUP1YCR084C PCT1P13259 424 aa5.86□□□□□ -1.47
TUP1YCR084C MRF1P30775 413 aaPredicted RBP5.86□□□□□ -1.47
TUP1YCR084C YPP1P46951 817 aa5.86□□□□□ -1.47
TUP1YCR084C MDM1Q01846 1127 aa5.86□□□□□ -1.47
TUP1YCR084C NSE3Q05541 303 aa5.86□□□□□ -1.47
TUP1YCR084C ENT2Q05785 613 aa5.86□□□□□ -1.47
TUP1YCR084C RSC2Q06488 889 aa5.86□□□□□ -1.47
TUP1YCR084C IES2P40154 320 aa5.86□□□□□ -1.47
TUP1YCR084C CEX1Q12453 761 aa5.86□□□□□ -1.47
TUP1YCR084C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
TUP1YCR084C GRX4P32642 244 aa5.85□□□□□ -1.47
TUP1YCR084C FUI1P38196 639 aa5.85□□□□□ -1.47
TUP1YCR084C GUA1P38625 525 aaKnown RBP5.85□□□□□ -1.47
TUP1YCR084C OCA1P50946 238 aaPredicted RBP5.85□□□□□ -1.47
TUP1YCR084C PRP43P53131 767 aaKnown RBP5.85□□□□□ -1.47
TUP1YCR084C PRP3Q03338 469 aaPredicted RBP5.85□□□□□ -1.47
TUP1YCR084C YPR172WQ06608 200 aa5.85□□□□□ -1.47
TUP1YCR084C PSR1Q07800 427 aa5.85□□□□□ -1.47
TUP1YCR084C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
TUP1YCR084C DNF1P32660 1571 aa5.85□□□□□ -1.47
TUP1YCR084C VPS15P22219 1454 aa5.85□□□□□ -1.47
TUP1YCR084C PRI1P10363 409 aa5.84□□□□□ -1.47
TUP1YCR084C STE5P32917 917 aa5.84□□□□□ -1.47
TUP1YCR084C STM1P39015 273 aaKnown RBP5.84□□□□□ -1.47
TUP1YCR084C BNI5P53890 448 aaKnown RBP5.84□□□□□ -1.47
TUP1YCR084C AVO1Q08236 1176 aa5.84□□□□□ -1.47
TUP1YCR084C RVB2Q12464 471 aaKnown RBP5.84□□□□□ -1.47
TUP1YCR084C GCN2P15442 1659 aa5.84□□□□□ -1.47
TUP1YCR084C NOT3P06102 836 aaKnown RBP5.84□□□□□ -1.47
TUP1YCR084C KAR1P11927 433 aa5.84□□□□□ -1.47
TUP1YCR084C YHR218WP38899 603 aa5.84□□□□□ -1.47
TUP1YCR084C GPI8P49018 411 aa5.84□□□□□ -1.47
TUP1YCR084C PDS5Q04264 1277 aa5.84□□□□□ -1.47
TUP1YCR084C DBP10Q12389 995 aaKnown RBP5.84□□□□□ -1.47
TUP1YCR084C VPS24P36095 224 aaKnown RBP5.83□□□□□ -1.48
TUP1YCR084C GLO3P38682 493 aaKnown RBP5.83□□□□□ -1.48
TUP1YCR084C RSC8P43609 557 aaKnown RBP5.83□□□□□ -1.48
TUP1YCR084C NST1P53935 1240 aa5.83□□□□□ -1.48
TUP1YCR084C ESL2P36168 1195 aa5.83□□□□□ -1.48
TUP1YCR084C NNF1P47149 201 aa5.83□□□□□ -1.48
TUP1YCR084C ELA1P53861 379 aaPredicted RBP5.83□□□□□ -1.48
TUP1YCR084C VTC3Q02725 835 aa5.83□□□□□ -1.48
TUP1YCR084C EDE1P34216 1381 aa5.83□□□□□ -1.48
TUP1YCR084C MPH3P0CE00 602 aa5.82□□□□□ -1.48
TUP1YCR084C MSP1P28737 362 aa5.82□□□□□ -1.48
TUP1YCR084C SAP190P36123 1033 aa5.82□□□□□ -1.48
TUP1YCR084C NPR3P38742 1146 aa5.82□□□□□ -1.48
TUP1YCR084C RAD26P40352 1085 aa5.82□□□□□ -1.48
TUP1YCR084C SMC3P47037 1230 aa5.82□□□□□ -1.48
TUP1YCR084C YGL081WP53156 320 aa5.82□□□□□ -1.48
TUP1YCR084C RPN7Q06103 429 aaKnown RBP5.82□□□□□ -1.48
TUP1YCR084C SGT2Q12118 346 aaKnown RBP5.82□□□□□ -1.48
TUP1YCR084C PUS1Q12211 544 aaKnown RBP5.82□□□□□ -1.48
TUP1YCR084C TY3B-GQ99315 1547 aa5.82□□□□□ -1.48
TUP1YCR084C RPL17AP05740 184 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C DEP1P31385 405 aa5.81□□□□□ -1.48
TUP1YCR084C ARL1P38116 183 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C ALD2P47771 506 aa5.81□□□□□ -1.48
TUP1YCR084C ULS1Q08562 1619 aa5.81□□□□□ -1.48
TUP1YCR084C VMA1P17255 1071 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C RPL5P26321 297 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C BRF1P29056 596 aa5.81□□□□□ -1.48
TUP1YCR084C PPH3P32345 308 aa5.81□□□□□ -1.48
TUP1YCR084C RTG2P32608 588 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C VHR2P40041 505 aa5.81□□□□□ -1.48
TUP1YCR084C HGH1P48362 394 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C SRP1Q02821 542 aaKnown RBP5.81□□□□□ -1.48
TUP1YCR084C RPP0P05317 312 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C PET111P08468 800 aa5.8□□□□□ -1.48
TUP1YCR084C SWI3P32591 825 aa5.8□□□□□ -1.48
TUP1YCR084C PEX5P35056 612 aa5.8□□□□□ -1.48
TUP1YCR084C DSF2P38213 736 aa5.8□□□□□ -1.48
TUP1YCR084C YNR021WP53723 404 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C OYE2Q03558 400 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C PHM6Q05637 104 aa5.8□□□□□ -1.48
TUP1YCR084C IRC3Q06683 689 aa5.8□□□□□ -1.48
TUP1YCR084C CYB2P00175 591 aa5.8□□□□□ -1.48
TUP1YCR084C THS1P04801 734 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C KNS1P32350 737 aaPredicted RBP5.8□□□□□ -1.48
TUP1YCR084C RPN12P32496 274 aa5.8□□□□□ -1.48
TUP1YCR084C RPL17BP46990 184 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C RAD17P48581 401 aa5.8□□□□□ -1.48
TUP1YCR084C RRP15Q06511 250 aaPredicted RBP5.8□□□□□ -1.48
TUP1YCR084C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48 RIP-Chip
TUP1YCR084C ESC1Q03661 1658 aaKnown RBP5.8□□□□□ -1.48
TUP1YCR084C SEC6P32844 805 aa5.79□□□□□ -1.48
TUP1YCR084C APC5Q08683 685 aa5.79□□□□□ -1.48
TUP1YCR084C AIM7Q12156 149 aa5.79□□□□□ -1.48
TUP1YCR084C CIT2P08679 460 aa5.78□□□□□ -1.48
TUP1YCR084C MAK16P10962 306 aaPredicted RBP5.78□□□□□ -1.48
TUP1YCR084C TRX2P22803 104 aaKnown RBP5.78□□□□□ -1.48
TUP1YCR084C BIO2P32451 375 aa5.78□□□□□ -1.48
TUP1YCR084C MET1P36150 593 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms