RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C NOP58Q12499 511 aaKnown RBP7.11□□□□□ -1.27
PAT1YCR077C PRD1P25375 712 aa7.1□□□□□ -1.27
PAT1YCR077C SSA1P10591 642 aaKnown RBP7.1□□□□□ -1.27
PAT1YCR077C SSA2P10592 639 aaKnown RBP7.1□□□□□ -1.27
PAT1YCR077C MSH4P40965 878 aaPredicted RBP7.1□□□□□ -1.27
PAT1YCR077C ALD4P46367 519 aaKnown RBP7.1□□□□□ -1.27
PAT1YCR077C YPP1P46951 817 aa7.1□□□□□ -1.27
PAT1YCR077C HAP5Q02516 242 aa7.1□□□□□ -1.27
PAT1YCR077C MIF2P35201 549 aa7.09□□□□□ -1.28
PAT1YCR077C ITC1P53125 1264 aa7.09□□□□□ -1.28
PAT1YCR077C PUF6Q04373 656 aaKnown RBP7.09□□□□□ -1.28
PAT1YCR077C HIF1Q12373 385 aa7.09□□□□□ -1.28
PAT1YCR077C YSH1Q06224 779 aaPredicted RBP7.08□□□□□ -1.28
PAT1YCR077C NHA1Q99271 985 aa7.08□□□□□ -1.28
PAT1YCR077C TOA1P32773 286 aa7.07□□□□□ -1.28
PAT1YCR077C TLG1Q03322 224 aa7.07□□□□□ -1.28
PAT1YCR077C RPN7Q06103 429 aaKnown RBP7.06□□□□□ -1.28
PAT1YCR077C RTT109Q07794 436 aa7.06□□□□□ -1.28
PAT1YCR077C CSE4P36012 229 aa7.06□□□□□ -1.28
PAT1YCR077C SMC3P47037 1230 aa7.06□□□□□ -1.28
PAT1YCR077C PRP3Q03338 469 aaPredicted RBP7.05□□□□□ -1.28
PAT1YCR077C MAK21Q12176 1025 aaKnown RBP7.05□□□□□ -1.28
PAT1YCR077C SRS2P12954 1174 aa7.05□□□□□ -1.28
PAT1YCR077C RRT14P40470 206 aa7.05□□□□□ -1.28
PAT1YCR077C LCD1Q04377 747 aa7.05□□□□□ -1.28
PAT1YCR077C CLB5P30283 435 aa7.04□□□□□ -1.28
PAT1YCR077C LTV1P34078 463 aa7.04□□□□□ -1.28
PAT1YCR077C SUB1P54000 292 aaKnown RBP7.04□□□□□ -1.28
PAT1YCR077C RSC1P53236 928 aa7.04□□□□□ -1.28
PAT1YCR077C ROM2P51862 1356 aaKnown RBP7.03□□□□□ -1.28
PAT1YCR077C KAR2P16474 682 aaKnown RBP7.03□□□□□ -1.28
PAT1YCR077C DSN1P40568 576 aa7.03□□□□□ -1.28
PAT1YCR077C TAP42Q04372 366 aa7.03□□□□□ -1.28
PAT1YCR077C NUP145P49687 1317 aa7.03□□□□□ -1.28
PAT1YCR077C COG8Q04632 607 aa7.03□□□□□ -1.28
PAT1YCR077C RRP14P36080 434 aaKnown RBP7.02□□□□□ -1.29
PAT1YCR077C RKM3P38222 552 aa7.02□□□□□ -1.29
PAT1YCR077C BDH2P39713 417 aa7.02□□□□□ -1.29
PAT1YCR077C TY1B-AO13527 1196 aaKnown RBP7.01□□□□□ -1.29
PAT1YCR077C TRP5P00931 707 aaKnown RBP7.01□□□□□ -1.29
PAT1YCR077C AUS1Q08409 1394 aa7.01□□□□□ -1.29
PAT1YCR077C DLD1P32891 587 aa7.01□□□□□ -1.29
PAT1YCR077C CIR1P42940 261 aa7.01□□□□□ -1.29
PAT1YCR077C MAK10Q02197 733 aa7.01□□□□□ -1.29
PAT1YCR077C HIM1Q06674 414 aa7.01□□□□□ -1.29
PAT1YCR077C GIN4Q12263 1142 aa7.01□□□□□ -1.29
PAT1YCR077C MCM1P11746 286 aa7□□□□□ -1.29
PAT1YCR077C BYE1P36106 594 aa7□□□□□ -1.29
PAT1YCR077C ILV3P39522 585 aaKnown RBP7□□□□□ -1.29
PAT1YCR077C PAP2P53632 584 aaKnown RBP7□□□□□ -1.29
PAT1YCR077C KRE33P53914 1056 aaKnown RBP7□□□□□ -1.29
PAT1YCR077C RCM1P53972 490 aa7□□□□□ -1.29
PAT1YCR077C BMS1Q08965 1183 aaKnown RBP7□□□□□ -1.29
PAT1YCR077C NOP8Q08287 484 aaPredicted RBP7□□□□□ -1.29
PAT1YCR077C PSK1P31374 1356 aa6.99□□□□□ -1.29
PAT1YCR077C USO1P25386 1790 aa6.99□□□□□ -1.29
PAT1YCR077C MCM2P29469 868 aa6.99□□□□□ -1.29
PAT1YCR077C TAN1P53072 289 aaPredicted RBP6.99□□□□□ -1.29
PAT1YCR077C GCR2Q01722 534 aa6.99□□□□□ -1.29
PAT1YCR077C NKP2Q06162 153 aa6.99□□□□□ -1.29
PAT1YCR077C RAD50P12753 1312 aa6.99□□□□□ -1.29
PAT1YCR077C PPH3P32345 308 aa6.98□□□□□ -1.29
PAT1YCR077C CBF5P33322 483 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PAT1YCR077C NPA3P47122 385 aa6.98□□□□□ -1.29
PAT1YCR077C SAP190P36123 1033 aa6.98□□□□□ -1.29
PAT1YCR077C SUP35P05453 685 aaKnown RBP6.97□□□□□ -1.29
PAT1YCR077C RPN12P32496 274 aa6.97□□□□□ -1.29
PAT1YCR077C SPT16P32558 1035 aaKnown RBP6.97□□□□□ -1.29
PAT1YCR077C SEC9P40357 651 aa6.97□□□□□ -1.29
PAT1YCR077C RSC8P43609 557 aaKnown RBP6.97□□□□□ -1.29
PAT1YCR077C APC1P53886 1748 aa6.96□□□□□ -1.29
PAT1YCR077C RVS167P39743 482 aaKnown RBP6.96□□□□□ -1.29
PAT1YCR077C TPM2P40414 161 aa6.96□□□□□ -1.29
PAT1YCR077C HST1P53685 503 aa6.96□□□□□ -1.29
PAT1YCR077C RIA1P53893 1110 aa6.96□□□□□ -1.29
PAT1YCR077C DUR1,2P32528 1835 aaKnown RBP6.96□□□□□ -1.3
PAT1YCR077C BRN1P38170 754 aa6.96□□□□□ -1.3
PAT1YCR077C MED8P38304 223 aa6.96□□□□□ -1.3
PAT1YCR077C HYR1P40581 163 aaKnown RBP6.96□□□□□ -1.3
PAT1YCR077C LEM3P42838 414 aa6.96□□□□□ -1.3
PAT1YCR077C PDI1P17967 522 aaKnown RBP6.95□□□□□ -1.3
PAT1YCR077C MRX12P47084 519 aa6.95□□□□□ -1.3
PAT1YCR077C HRQ1Q05549 1077 aa6.95□□□□□ -1.3
PAT1YCR077C TY1B-NL2Q99337 1749 aaKnown RBP6.95□□□□□ -1.3
PAT1YCR077C ESC2Q06340 456 aa6.95□□□□□ -1.3
PAT1YCR077C DEP1P31385 405 aa6.94□□□□□ -1.3
PAT1YCR077C GRX4P32642 244 aa6.94□□□□□ -1.3
PAT1YCR077C YFR006WP43590 535 aa6.94□□□□□ -1.3
PAT1YCR077C ECM1P39715 212 aa6.94□□□□□ -1.3
PAT1YCR077C HXT13P39924 564 aa6.94□□□□□ -1.3
PAT1YCR077C HOS3Q02959 697 aaKnown RBP6.94□□□□□ -1.3
PAT1YCR077C VPS20Q04272 221 aa6.94□□□□□ -1.3
PAT1YCR077C KEX1P09620 729 aa6.93□□□□□ -1.3
PAT1YCR077C MIC60P36112 540 aa6.93□□□□□ -1.3
PAT1YCR077C PEA2P40091 420 aa6.93□□□□□ -1.3
PAT1YCR077C APL5Q08951 932 aaKnown RBP6.93□□□□□ -1.3
PAT1YCR077C MPE1P35728 441 aaKnown RBP6.93□□□□□ -1.3
PAT1YCR077C STU2P46675 888 aa6.93□□□□□ -1.3
PAT1YCR077C RPO41P13433 1351 aaKnown RBP6.92□□□□□ -1.3
PAT1YCR077C PTP3P40048 928 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms